RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 DMXL2Q8TDJ6 3036 aa13.75□□□□□ -0.21
CCDC43-202ENST00000457422 A0A087WWC5 75 aa13.75□□□□□ -0.21
CCDC43-202ENST00000457422 A0A1W2PPE2 198 aa13.75□□□□□ -0.21
CCDC43-202ENST00000457422 A0A1W2PPE3 182 aa13.75□□□□□ -0.21
CCDC43-202ENST00000457422 A0A1W2PPH5 198 aa13.75□□□□□ -0.21
CCDC43-202ENST00000457422 FGF8P55075 233 aaPredicted RBP13.75□□□□□ -0.21
CCDC43-202ENST00000457422 RELBQ01201 579 aa13.75□□□□□ -0.21
CCDC43-202ENST00000457422 BSPH1Q075Z2 132 aa13.75□□□□□ -0.21
CCDC43-202ENST00000457422 OR4A16Q8NH70 328 aa13.75□□□□□ -0.21
CCDC43-202ENST00000457422 OR4S2Q8NH73 311 aa13.75□□□□□ -0.21
CCDC43-202ENST00000457422 ZNF251Q9BRH9 671 aa13.75□□□□□ -0.21
CCDC43-202ENST00000457422 SAV1Q9H4B6 383 aaPredicted RBP13.75□□□□□ -0.21
CCDC43-202ENST00000457422 IDI2-AS1Q9NZ38 188 aa13.75□□□□□ -0.21
CCDC43-202ENST00000457422 PRELID1Q9Y255 219 aa13.75□□□□□ -0.21
CCDC43-202ENST00000457422 SAA2-SAA4A0A096LPE2 208 aa13.75□□□□□ -0.21
CCDC43-202ENST00000457422 ZFP92A6NM28 416 aa13.75□□□□□ -0.21
CCDC43-202ENST00000457422 C17orf100A8MU93 164 aa13.75□□□□□ -0.21
CCDC43-202ENST00000457422 K7ENP7 123 aa13.75□□□□□ -0.21
CCDC43-202ENST00000457422 IFNA1P01562 189 aa13.75□□□□□ -0.21
CCDC43-202ENST00000457422 IFNA17P01571 189 aa13.75□□□□□ -0.21
CCDC43-202ENST00000457422 OR4A8P0C604 315 aa13.75□□□□□ -0.21
CCDC43-202ENST00000457422 SAA2P0DJI9 122 aaPredicted RBP13.75□□□□□ -0.21
CCDC43-202ENST00000457422 RAB5BP61020 215 aa13.75□□□□□ -0.21
CCDC43-202ENST00000457422 HABP2Q14520 560 aaPredicted RBP13.75□□□□□ -0.21
CCDC43-202ENST00000457422 FAM90A2PQ658T7 463 aa13.75□□□□□ -0.21
CCDC43-202ENST00000457422 VKORC1L1Q8N0U8 176 aa13.75□□□□□ -0.21
CCDC43-202ENST00000457422 TVP23CQ96ET8 276 aa13.75□□□□□ -0.21
CCDC43-202ENST00000457422 YPEL4Q96NS1 127 aa13.75□□□□□ -0.21
CCDC43-202ENST00000457422 SCNM1Q9BWG6 230 aa13.75□□□□□ -0.21
CCDC43-202ENST00000457422 NPCDR1Q9BY65 106 aa13.75□□□□□ -0.21
CCDC43-202ENST00000457422 SLC39A9Q9NUM3 307 aa13.75□□□□□ -0.21
CCDC43-202ENST00000457422 PIEZO2Q9H5I5 2752 aa13.74□□□□□ -0.21
CCDC43-202ENST00000457422 THBS3P49746 956 aa13.74□□□□□ -0.21
CCDC43-202ENST00000457422 RPP30P78346 268 aaKnown RBP13.74□□□□□ -0.21
CCDC43-202ENST00000457422 CCL8P80075 99 aa13.74□□□□□ -0.21
CCDC43-202ENST00000457422 TFF3Q07654 80 aa13.74□□□□□ -0.21
CCDC43-202ENST00000457422 CA5BP1Q8WTZ4 195 aa13.74□□□□□ -0.21
CCDC43-202ENST00000457422 SNRNP40Q96DI7 357 aaKnown RBP13.74□□□□□ -0.21
CCDC43-202ENST00000457422 ADTRPQ96IZ2 230 aa13.74□□□□□ -0.21
CCDC43-202ENST00000457422 TMEM140Q9NV12 185 aa13.74□□□□□ -0.21
CCDC43-202ENST00000457422 VAX2Q9UIW0 290 aa13.74□□□□□ -0.21
CCDC43-202ENST00000457422 CTXND1A0A1B0GTU2 59 aa13.73□□□□□ -0.21
CCDC43-202ENST00000457422 EIF3GO75821 320 aaKnown RBP eCLIP13.73□□□□□ -0.21
CCDC43-202ENST00000457422 VDAC2P45880 294 aaPredicted RBP13.73□□□□□ -0.21
CCDC43-202ENST00000457422 LHX4Q969G2 390 aa13.73□□□□□ -0.21
CCDC43-202ENST00000457422 MALSU1Q96EH3 234 aa13.73□□□□□ -0.21
CCDC43-202ENST00000457422 TET2Q6N021 2002 aaPredicted RBP13.73□□□□□ -0.21
CCDC43-202ENST00000457422 C1orf196B1AJZ1 125 aa13.73□□□□□ -0.21
CCDC43-202ENST00000457422 RAB5AP20339 215 aa13.73□□□□□ -0.21
CCDC43-202ENST00000457422 AGAP20933 346 aa13.73□□□□□ -0.21
CCDC43-202ENST00000457422 PLA2G5P39877 138 aa13.73□□□□□ -0.21
CCDC43-202ENST00000457422 DLK1P80370 383 aa13.73□□□□□ -0.21
CCDC43-202ENST00000457422 TRGV8A0A0C4DH27 118 aa13.72□□□□□ -0.21
CCDC43-202ENST00000457422 C17orf112F2Z3M2 114 aa13.72□□□□□ -0.21
CCDC43-202ENST00000457422 OR2C1O95371 312 aa13.72□□□□□ -0.21
CCDC43-202ENST00000457422 TAGLN2P37802 199 aaKnown RBP13.72□□□□□ -0.21
CCDC43-202ENST00000457422 MRPS11P82912 194 aaKnown RBP13.72□□□□□ -0.21
CCDC43-202ENST00000457422 ADAM5Q6NVV9 412 aa13.72□□□□□ -0.21
CCDC43-202ENST00000457422 ZFP82Q8N141 532 aa13.72□□□□□ -0.21
CCDC43-202ENST00000457422 ZCCHC24Q8N2G6 241 aaKnown RBP13.72□□□□□ -0.21
CCDC43-202ENST00000457422 GGACTQ9BVM4 153 aa13.72□□□□□ -0.21
CCDC43-202ENST00000457422 RPUSD1Q9UJJ7 312 aaKnown RBP13.72□□□□□ -0.21
CCDC43-202ENST00000457422 WDR83OSQ9Y284 106 aa13.72□□□□□ -0.21
CCDC43-202ENST00000457422 LINC00312Q9Y6C7 94 aa13.72□□□□□ -0.21
CCDC43-202ENST00000457422 CEP295Q9C0D2 2601 aa13.72□□□□□ -0.21
CCDC43-202ENST00000457422 TRAV3A0A0B4J244 114 aa13.71□□□□□ -0.21
CCDC43-202ENST00000457422 hADV38S2A0JD32 116 aa13.71□□□□□ -0.21
CCDC43-202ENST00000457422 NKX6-3A6NJ46 265 aa13.71□□□□□ -0.21
CCDC43-202ENST00000457422 C15orf61A6NNL5 157 aa13.71□□□□□ -0.21
CCDC43-202ENST00000457422 SOX15O60248 233 aa13.71□□□□□ -0.21
CCDC43-202ENST00000457422 NDUFS6O75380 124 aaKnown RBP13.71□□□□□ -0.21
CCDC43-202ENST00000457422 HOXA1P49639 335 aaPredicted RBP13.71□□□□□ -0.21
CCDC43-202ENST00000457422 GNG10P50151 68 aa13.71□□□□□ -0.21
CCDC43-202ENST00000457422 RAB11AP62491 216 aa13.71□□□□□ -0.21
CCDC43-202ENST00000457422 POU2AF1Q16633 256 aa13.71□□□□□ -0.21
CCDC43-202ENST00000457422 FFAR4Q5NUL3 377 aa13.71□□□□□ -0.21
CCDC43-202ENST00000457422 RBMS3Q6XE24 437 aaKnown RBP13.71□□□□□ -0.21
CCDC43-202ENST00000457422 FAM24BQ8N5W8 94 aa13.71□□□□□ -0.21
CCDC43-202ENST00000457422 Q8N7P7 452 aa13.71□□□□□ -0.21
CCDC43-202ENST00000457422 ZNF709Q8N972 641 aa13.71□□□□□ -0.21
CCDC43-202ENST00000457422 OR10G9Q8NGN4 311 aa13.71□□□□□ -0.21
CCDC43-202ENST00000457422 OR10G7Q8NGN6 311 aa13.71□□□□□ -0.21
CCDC43-202ENST00000457422 C2CD4CQ8TF44 421 aa13.71□□□□□ -0.21
CCDC43-202ENST00000457422 DCHS1Q96JQ0 3298 aa13.71□□□□□ -0.21
CCDC43-202ENST00000457422 B4DEV8 164 aa13.71□□□□□ -0.21
CCDC43-202ENST00000457422 PRSS46E5RG02 174 aa13.71□□□□□ -0.21
CCDC43-202ENST00000457422 GFRA3O60609 400 aa13.71□□□□□ -0.21
CCDC43-202ENST00000457422 MMP23AO75900 390 aa13.71□□□□□ -0.21
CCDC43-202ENST00000457422 CD1BP29016 333 aa13.71□□□□□ -0.21
CCDC43-202ENST00000457422 TMPRSS3P57727 454 aa13.71□□□□□ -0.21
CCDC43-202ENST00000457422 PNRC1Q12796 327 aaPredicted RBP13.71□□□□□ -0.21
CCDC43-202ENST00000457422 SLC25A48Q6ZT89 311 aaKnown RBP13.71□□□□□ -0.21
CCDC43-202ENST00000457422 LYG1Q8N1E2 194 aa13.71□□□□□ -0.21
CCDC43-202ENST00000457422 ZNF383Q8NA42 475 aa13.71□□□□□ -0.21
CCDC43-202ENST00000457422 OR10A7Q8NGE5 316 aa13.71□□□□□ -0.21
CCDC43-202ENST00000457422 ACTR3CQ9C0K3 210 aaPredicted RBP13.71□□□□□ -0.21
CCDC43-202ENST00000457422 SIRT7Q9NRC8 400 aa13.71□□□□□ -0.21
CCDC43-202ENST00000457422 TRAV38-1A0A0B4J264 116 aa13.7□□□□□ -0.22
CCDC43-202ENST00000457422 CXorf65A6NEN9 183 aa13.7□□□□□ -0.22
CCDC43-202ENST00000457422 ATXN7O15265 892 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms