RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 OR2H2O95918 312 aa8.62□□□□□ -1.03
CLIP4-208ENST00000456385 ZNF83P51522 516 aa8.62□□□□□ -1.03
CLIP4-208ENST00000456385 SSR4P51571 173 aa8.62□□□□□ -1.03
CLIP4-208ENST00000456385 SAPCD1Q5SSQ6 148 aa8.62□□□□□ -1.03
CLIP4-208ENST00000456385 ETFRF1Q6IPR1 90 aa8.62□□□□□ -1.03
CLIP4-208ENST00000456385 TIPARPQ7Z3E1 657 aaKnown RBP8.62□□□□□ -1.03
CLIP4-208ENST00000456385 LINC00596Q86U02 117 aa8.62□□□□□ -1.03
CLIP4-208ENST00000456385 SH2D2AQ9NP31 389 aa8.62□□□□□ -1.03
CLIP4-208ENST00000456385 NAT8BQ9UHF3 227 aa8.62□□□□□ -1.03
CLIP4-208ENST00000456385 GTF3C1Q12789 2109 aa8.61□□□□□ -1.03
CLIP4-208ENST00000456385 YLPM1P49750 1951 aaKnown RBP8.61□□□□□ -1.03
CLIP4-208ENST00000456385 LOC105371242A0A075B767 164 aa8.61□□□□□ -1.03
CLIP4-208ENST00000456385 IGHV1-45A0A0A0MS14 117 aa8.61□□□□□ -1.03
CLIP4-208ENST00000456385 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.61□□□□□ -1.03
CLIP4-208ENST00000456385 C3orf79P0CE67 100 aa8.61□□□□□ -1.03
CLIP4-208ENST00000456385 KLF3P57682 345 aaPredicted RBP8.61□□□□□ -1.03
CLIP4-208ENST00000456385 WIPI1Q5MNZ9 446 aaPredicted RBP8.61□□□□□ -1.03
CLIP4-208ENST00000456385 MIC13Q5XKP0 118 aa8.61□□□□□ -1.03
CLIP4-208ENST00000456385 MRPL14Q6P1L8 145 aaKnown RBP8.61□□□□□ -1.03
CLIP4-208ENST00000456385 ZNF645Q8N7E2 425 aa8.61□□□□□ -1.03
CLIP4-208ENST00000456385 RAB1CQ92928 201 aa8.61□□□□□ -1.03
CLIP4-208ENST00000456385 UHRF2Q96PU4 802 aa8.61□□□□□ -1.03
CLIP4-208ENST00000456385 GAL3ST2Q9H3Q3 398 aa8.61□□□□□ -1.03
CLIP4-208ENST00000456385 FSCN3Q9NQT6 498 aa8.61□□□□□ -1.03
CLIP4-208ENST00000456385 WDR83OSQ9Y284 106 aa8.61□□□□□ -1.03
CLIP4-208ENST00000456385 CACNA1DQ01668 2161 aa8.61□□□□□ -1.03
CLIP4-208ENST00000456385 NCKAP5O14513 1909 aa8.6□□□□□ -1.03
CLIP4-208ENST00000456385 A0A1W2PQM1 296 aa8.6□□□□□ -1.03
CLIP4-208ENST00000456385 RNF212BA8MTL3 300 aa8.6□□□□□ -1.03
CLIP4-208ENST00000456385 ZNF253O75346 499 aa8.6□□□□□ -1.03
CLIP4-208ENST00000456385 CEBPDP49716 269 aaPredicted RBP8.6□□□□□ -1.03
CLIP4-208ENST00000456385 GFRA1P56159 465 aa8.6□□□□□ -1.03
CLIP4-208ENST00000456385 HOXA4Q00056 320 aaPredicted RBP8.6□□□□□ -1.03
CLIP4-208ENST00000456385 UBE2V1Q13404 147 aa8.6□□□□□ -1.03
CLIP4-208ENST00000456385 SPATA46Q5T0L3 261 aa8.6□□□□□ -1.03
CLIP4-208ENST00000456385 LCN12Q6JVE5 192 aa8.6□□□□□ -1.03
CLIP4-208ENST00000456385 GUSBP11Q6P575 273 aa8.6□□□□□ -1.03
CLIP4-208ENST00000456385 SFXN3Q9BWM7 321 aa8.6□□□□□ -1.03
CLIP4-208ENST00000456385 OCIAD1Q9NX40 245 aa8.6□□□□□ -1.03
CLIP4-208ENST00000456385 DPRXA6NFQ7 191 aa8.6□□□□□ -1.03
CLIP4-208ENST00000456385 C2CD4DB7Z1M9 353 aa8.6□□□□□ -1.03
CLIP4-208ENST00000456385 DNPH1O43598 174 aa8.6□□□□□ -1.03
CLIP4-208ENST00000456385 FOXH1O75593 365 aa8.6□□□□□ -1.03
CLIP4-208ENST00000456385 NEURL1O76050 574 aa8.6□□□□□ -1.03
CLIP4-208ENST00000456385 STAG3L2P0CL84 134 aa8.6□□□□□ -1.03
CLIP4-208ENST00000456385 STAG3L3P0CL85 134 aa8.6□□□□□ -1.03
CLIP4-208ENST00000456385 GNG3P63215 75 aa8.6□□□□□ -1.03
CLIP4-208ENST00000456385 HTD2P86397 168 aa8.6□□□□□ -1.03
CLIP4-208ENST00000456385 RNF151Q2KHN1 245 aa8.6□□□□□ -1.03
CLIP4-208ENST00000456385 RPEL1Q2QD12 228 aa8.6□□□□□ -1.03
CLIP4-208ENST00000456385 TMEM249Q2WGJ8 235 aa8.6□□□□□ -1.03
CLIP4-208ENST00000456385 SPATA31B1PQ5VZV4 182 aa8.6□□□□□ -1.03
CLIP4-208ENST00000456385 H2BFWTQ7Z2G1 175 aa8.6□□□□□ -1.03
CLIP4-208ENST00000456385 OR52L2PQ8NGH6 319 aa8.6□□□□□ -1.03
CLIP4-208ENST00000456385 KCNS1Q96KK3 526 aa8.6□□□□□ -1.03
CLIP4-208ENST00000456385 IMMP1LQ96LU5 166 aa8.6□□□□□ -1.03
CLIP4-208ENST00000456385 ALKBH7Q9BT30 221 aaPredicted RBP8.6□□□□□ -1.03
CLIP4-208ENST00000456385 SEPSECSQ9HD40 501 aaKnown RBP8.6□□□□□ -1.03
CLIP4-208ENST00000456385 V9GYV3 84 aa8.6□□□□□ -1.03
CLIP4-208ENST00000456385 MED12LQ86YW9 2145 aa8.6□□□□□ -1.03
CLIP4-208ENST00000456385 IGHV5-10-1A0A0J9YXX1 117 aa8.59□□□□□ -1.03
CLIP4-208ENST00000456385 MRPL33O75394 65 aaKnown RBP8.59□□□□□ -1.03
CLIP4-208ENST00000456385 COX6A1P12074 109 aa8.59□□□□□ -1.03
CLIP4-208ENST00000456385 TSPOP30536 169 aa8.59□□□□□ -1.03
CLIP4-208ENST00000456385 TCL1AP56279 114 aa8.59□□□□□ -1.03
CLIP4-208ENST00000456385 FXYD3Q14802 87 aa8.59□□□□□ -1.03
CLIP4-208ENST00000456385 ZNF718Q3SXZ3 478 aa8.59□□□□□ -1.03
CLIP4-208ENST00000456385 TREML4Q6UXN2 200 aa8.59□□□□□ -1.03
CLIP4-208ENST00000456385 ERASQ7Z444 233 aa8.59□□□□□ -1.03
CLIP4-208ENST00000456385 RPS19BP1Q86WX3 136 aaKnown RBP8.59□□□□□ -1.03
CLIP4-208ENST00000456385 NIT1Q86X76 327 aa8.59□□□□□ -1.03
CLIP4-208ENST00000456385 SSMEM1Q8WWF3 244 aa8.59□□□□□ -1.03
CLIP4-208ENST00000456385 EAF1Q96JC9 268 aaPredicted RBP8.59□□□□□ -1.03
CLIP4-208ENST00000456385 MGST2Q99735 147 aa8.59□□□□□ -1.03
CLIP4-208ENST00000456385 GNB1LQ9BYB4 327 aa8.59□□□□□ -1.03
CLIP4-208ENST00000456385 RNASE7Q9H1E1 156 aaKnown RBP8.59□□□□□ -1.03
CLIP4-208ENST00000456385 COX11Q9Y6N1 276 aa8.59□□□□□ -1.03
CLIP4-208ENST00000456385 DOCK7Q96N67 2140 aa8.59□□□□□ -1.03
CLIP4-208ENST00000456385 ANKRD30BLA7E2S9 258 aa8.59□□□□□ -1.03
CLIP4-208ENST00000456385 LINC00473A8K010 186 aa8.59□□□□□ -1.03
CLIP4-208ENST00000456385 ZNF324O75467 553 aaPredicted RBP8.59□□□□□ -1.03
CLIP4-208ENST00000456385 NTF3P20783 257 aa8.59□□□□□ -1.03
CLIP4-208ENST00000456385 SRIP30626 198 aa8.59□□□□□ -1.03
CLIP4-208ENST00000456385 CDKN1BP46527 198 aa8.59□□□□□ -1.03
CLIP4-208ENST00000456385 CCL7P80098 99 aa8.59□□□□□ -1.03
CLIP4-208ENST00000456385 EIF4EBP1Q13541 118 aaPredicted RBP8.59□□□□□ -1.03
CLIP4-208ENST00000456385 ASPHD1Q5U4P2 390 aa8.59□□□□□ -1.03
CLIP4-208ENST00000456385 MOB1BQ7L9L4 216 aa8.59□□□□□ -1.03
CLIP4-208ENST00000456385 DOLPP1Q86YN1 238 aa8.59□□□□□ -1.03
CLIP4-208ENST00000456385 GMPPAQ96IJ6 420 aaPredicted RBP8.59□□□□□ -1.03
CLIP4-208ENST00000456385 POM121L2Q96KW2 1035 aa8.59□□□□□ -1.03
CLIP4-208ENST00000456385 MBNL3Q9NUK0 354 aaKnown RBP8.59□□□□□ -1.03
CLIP4-208ENST00000456385 ITGB1BP1O14713 200 aa8.58□□□□□ -1.04
CLIP4-208ENST00000456385 SS18L1O75177 396 aaPredicted RBP8.58□□□□□ -1.04
CLIP4-208ENST00000456385 CXorf1O96002 111 aa8.58□□□□□ -1.04
CLIP4-208ENST00000456385 SRD5A2P31213 254 aa8.58□□□□□ -1.04
CLIP4-208ENST00000456385 PRRX1P54821 245 aa8.58□□□□□ -1.04
CLIP4-208ENST00000456385 SRYQ05066 204 aa8.58□□□□□ -1.04
CLIP4-208ENST00000456385 PDLIM3Q53GG5 364 aaPredicted RBP8.58□□□□□ -1.04
CLIP4-208ENST00000456385 DCAF12Q5T6F0 453 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms