RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 VKORC1L1Q8N0U8 176 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 OR5M8Q8NGP6 311 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 OR2T35Q8NGX2 323 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 ASB13Q8WXK3 278 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 GSX1Q9H4S2 264 aaPredicted RBP8.82□□□□□ -1
SCN9A-205ENST00000454569 YAE1D1Q9NRH1 226 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 SLC35D1Q9NTN3 355 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 SHPKQ9UHJ6 478 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 KCNIP3Q9Y2W7 256 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 AMMECR1Q9Y4X0 333 aaPredicted RBP8.82□□□□□ -1
SCN9A-205ENST00000454569 OR2A4O95047 310 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 CRYZL1O95825 349 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 IL3RAP26951 378 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 H2BFSP57053 126 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 LCE2CQ5TA81 110 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 MINOS1Q5TGZ0 78 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 FAM71F2Q6NXP2 309 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 Q6ZRM9 215 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 Q71RC1 249 aaPredicted RBP8.82□□□□□ -1
SCN9A-205ENST00000454569 SLC35G3Q8N808 338 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 PIFOQ8TCI5 191 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 MALSU1Q96EH3 234 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 TMEM56Q96MV1 263 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 OR2A7Q96R45 310 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 PDCD10Q9BUL8 212 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 RANBP3Q9H6Z4 567 aaPredicted RBP8.82□□□□□ -1
SCN9A-205ENST00000454569 TMA7Q9Y2S6 64 aaKnown RBP8.82□□□□□ -1
SCN9A-205ENST00000454569 TBL2Q9Y4P3 447 aaKnown RBP8.82□□□□□ -1
SCN9A-205ENST00000454569 MINOS1-NBL1R4GNA1 71 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 TMEM56-RWDD3S4R434 201 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 TRAV3A0A0B4J244 114 aa8.81□□□□□ -1
SCN9A-205ENST00000454569 G6PCP35575 357 aa8.81□□□□□ -1
SCN9A-205ENST00000454569 CATR1Q13166 79 aa8.81□□□□□ -1
SCN9A-205ENST00000454569 HABP2Q14520 560 aaPredicted RBP8.81□□□□□ -1
SCN9A-205ENST00000454569 GSG1LQ6UXU4 331 aa8.81□□□□□ -1
SCN9A-205ENST00000454569 LRTM2Q8N967 370 aa8.81□□□□□ -1
SCN9A-205ENST00000454569 SEC22AQ96IW7 307 aa8.81□□□□□ -1
SCN9A-205ENST00000454569 OR10C1Q96KK4 312 aa8.81□□□□□ -1
SCN9A-205ENST00000454569 HYLS1Q96M11 299 aa8.81□□□□□ -1
SCN9A-205ENST00000454569 RAB18Q9NP72 206 aa8.81□□□□□ -1
SCN9A-205ENST00000454569 LIN7CQ9NUP9 197 aaKnown RBP8.81□□□□□ -1
SCN9A-205ENST00000454569 NSD1Q96L73 2696 aaPredicted RBP8.8□□□□□ -1
SCN9A-205ENST00000454569 FAM90A9PA6NNJ1 464 aa8.8□□□□□ -1
SCN9A-205ENST00000454569 RNF212BA8MTL3 300 aa8.8□□□□□ -1
SCN9A-205ENST00000454569 FAM25EA8MYX2 175 aa8.8□□□□□ -1
SCN9A-205ENST00000454569 H7C2Y5 167 aa8.8□□□□□ -1
SCN9A-205ENST00000454569 VENTXO95231 258 aa8.8□□□□□ -1
SCN9A-205ENST00000454569 KRASP01116 189 aa8.8□□□□□ -1
SCN9A-205ENST00000454569 IGLV2-23P01705 113 aa8.8□□□□□ -1
SCN9A-205ENST00000454569 SNRNP70P08621 437 aaKnown RBP8.8□□□□□ -1
SCN9A-205ENST00000454569 P0C879 139 aa8.8□□□□□ -1
SCN9A-205ENST00000454569 HLA-GP17693 338 aa8.8□□□□□ -1
SCN9A-205ENST00000454569 CEACAM3P40198 252 aa8.8□□□□□ -1
SCN9A-205ENST00000454569 F2RL1P55085 397 aa8.8□□□□□ -1
SCN9A-205ENST00000454569 HNF4GQ14541 408 aa8.8□□□□□ -1
SCN9A-205ENST00000454569 DEFB112Q30KQ8 113 aa8.8□□□□□ -1
SCN9A-205ENST00000454569 GGNBP1Q5YKI7 109 aa8.8□□□□□ -1
SCN9A-205ENST00000454569 SSX9Q7RTT3 188 aa8.8□□□□□ -1
SCN9A-205ENST00000454569 GPR146Q96CH1 333 aa8.8□□□□□ -1
SCN9A-205ENST00000454569 ZNF48Q96MX3 618 aaPredicted RBP8.8□□□□□ -1
SCN9A-205ENST00000454569 NUP50Q9UKX7 468 aa8.8□□□□□ -1
SCN9A-205ENST00000454569 PRELID3BQ9Y3B1 194 aa8.8□□□□□ -1
SCN9A-205ENST00000454569 FN1P02751 2386 aaKnown RBP8.79□□□□□ -1
SCN9A-205ENST00000454569 C13orf42A0A1B0GVH6 325 aa8.79□□□□□ -1
SCN9A-205ENST00000454569 C5orf51A6NDU8 294 aa8.79□□□□□ -1
SCN9A-205ENST00000454569 IGKV1D-33P01593 117 aa8.79□□□□□ -1
SCN9A-205ENST00000454569 IGKV1-33P01594 117 aa8.79□□□□□ -1
SCN9A-205ENST00000454569 SERPINE2P07093 398 aa8.79□□□□□ -1
SCN9A-205ENST00000454569 CD99P14209 185 aa8.79□□□□□ -1
SCN9A-205ENST00000454569 MYOD1P15172 320 aa8.79□□□□□ -1
SCN9A-205ENST00000454569 SRPXP78539 464 aa8.79□□□□□ -1
SCN9A-205ENST00000454569 MRGPRG-AS1Q2M3A8 158 aa8.79□□□□□ -1
SCN9A-205ENST00000454569 TMEM177Q53S58 311 aa8.79□□□□□ -1
SCN9A-205ENST00000454569 NMSQ5H8A3 153 aa8.79□□□□□ -1
SCN9A-205ENST00000454569 ZNF695Q8IW36 515 aa8.79□□□□□ -1
SCN9A-205ENST00000454569 LGI3Q8N145 548 aa8.79□□□□□ -1
SCN9A-205ENST00000454569 NANPQ8TBE9 248 aa8.79□□□□□ -1
SCN9A-205ENST00000454569 RBPMSQ93062 196 aaKnown RBP8.79□□□□□ -1
SCN9A-205ENST00000454569 R3HDM4Q96D70 268 aa8.79□□□□□ -1
SCN9A-205ENST00000454569 ADTRPQ96IZ2 230 aa8.79□□□□□ -1
SCN9A-205ENST00000454569 MEGF9Q9H1U4 602 aa8.79□□□□□ -1
SCN9A-205ENST00000454569 TPSG1Q9NRR2 321 aa8.79□□□□□ -1
SCN9A-205ENST00000454569 NSG2Q9Y328 171 aa8.79□□□□□ -1
SCN9A-205ENST00000454569 WASHC3Q9Y3C0 194 aa8.79□□□□□ -1
SCN9A-205ENST00000454569 HIVEP2P31629 2446 aa8.79□□□□□ -1
SCN9A-205ENST00000454569 NF1P21359 2839 aa8.79□□□□□ -1
SCN9A-205ENST00000454569 TEP1Q99973 2627 aaKnown RBP8.78□□□□□ -1
SCN9A-205ENST00000454569 G3V3Q6 166 aa8.78□□□□□ -1
SCN9A-205ENST00000454569 RBFOX2O43251 390 aaKnown RBP eCLIP8.78□□□□□ -1
SCN9A-205ENST00000454569 HPRT1P00492 218 aa8.78□□□□□ -1
SCN9A-205ENST00000454569 OR9G9P0C7N8 305 aa8.78□□□□□ -1
SCN9A-205ENST00000454569 SRSF4Q08170 494 aaKnown RBP8.78□□□□□ -1
SCN9A-205ENST00000454569 Q5BKY6 102 aa8.78□□□□□ -1
SCN9A-205ENST00000454569 C11orf87Q6NUJ2 197 aa8.78□□□□□ -1
SCN9A-205ENST00000454569 OR8H3Q8N146 312 aa8.78□□□□□ -1
SCN9A-205ENST00000454569 MS4A7Q9GZW8 240 aaPredicted RBP8.78□□□□□ -1
SCN9A-205ENST00000454569 PLEKHA2Q9HB19 425 aa8.78□□□□□ -1
SCN9A-205ENST00000454569 COMMD9Q9P000 198 aa8.78□□□□□ -1
SCN9A-205ENST00000454569 MARCH11A6NNE9 402 aa8.78□□□□□ -1
SCN9A-205ENST00000454569 B3GALNT1O75752 331 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms