RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 CISD1Q9NZ45 108 aaKnown RBP9.69□□□□□ -0.86
VTA1-203ENST00000452973 RALYQ9UKM9 306 aaKnown RBP9.69□□□□□ -0.86
VTA1-203ENST00000452973 PUS1Q9Y606 427 aaKnown RBP eCLIP9.69□□□□□ -0.86
VTA1-203ENST00000452973 TNCP24821 2201 aa9.69□□□□□ -0.86
VTA1-203ENST00000452973 DCHS2Q6V1P9 2916 aa9.69□□□□□ -0.86
VTA1-203ENST00000452973 SMCO3A2RU48 225 aa9.69□□□□□ -0.86
VTA1-203ENST00000452973 NQO2P16083 231 aa9.69□□□□□ -0.86
VTA1-203ENST00000452973 REG1BP48304 166 aa9.69□□□□□ -0.86
VTA1-203ENST00000452973 LY6DQ14210 128 aa9.69□□□□□ -0.86
VTA1-203ENST00000452973 LFNGQ8NES3 379 aa9.69□□□□□ -0.86
VTA1-203ENST00000452973 TAF15Q92804 592 aaKnown RBP eCLIP9.69□□□□□ -0.86
VTA1-203ENST00000452973 RHOVQ96L33 236 aa9.69□□□□□ -0.86
VTA1-203ENST00000452973 NDRG3Q9UGV2 375 aa9.69□□□□□ -0.86
VTA1-203ENST00000452973 KPTNQ9Y664 436 aa9.69□□□□□ -0.86
VTA1-203ENST00000452973 PIEZO1Q92508 2521 aa9.69□□□□□ -0.86
VTA1-203ENST00000452973 C1QTNF9P0C862 333 aa9.69□□□□□ -0.86
VTA1-203ENST00000452973 MYOD1P15172 320 aa9.69□□□□□ -0.86
VTA1-203ENST00000452973 PRB3Q04118 309 aaPredicted RBP9.69□□□□□ -0.86
VTA1-203ENST00000452973 KLRB1Q12918 225 aa9.69□□□□□ -0.86
VTA1-203ENST00000452973 ZNF383Q8NA42 475 aa9.69□□□□□ -0.86
VTA1-203ENST00000452973 SLC35B3Q9H1N7 401 aa9.69□□□□□ -0.86
VTA1-203ENST00000452973 SEBOXQ9HB31 216 aaPredicted RBP9.69□□□□□ -0.86
VTA1-203ENST00000452973 RAB9BQ9NP90 201 aa9.69□□□□□ -0.86
VTA1-203ENST00000452973 ZNF729A6NN14 1252 aaPredicted RBP9.68□□□□□ -0.86
VTA1-203ENST00000452973 FCN3O75636 299 aa9.68□□□□□ -0.86
VTA1-203ENST00000452973 DEFA4P12838 97 aa9.68□□□□□ -0.86
VTA1-203ENST00000452973 FGF7P21781 194 aa9.68□□□□□ -0.86
VTA1-203ENST00000452973 CA7P43166 264 aa9.68□□□□□ -0.86
VTA1-203ENST00000452973 TFF3Q07654 80 aa9.68□□□□□ -0.86
VTA1-203ENST00000452973 SSX7Q7RTT5 188 aa9.68□□□□□ -0.86
VTA1-203ENST00000452973 ABHD12Q8N2K0 398 aa9.68□□□□□ -0.86
VTA1-203ENST00000452973 SPTAN1Q13813 2472 aaKnown RBP9.68□□□□□ -0.86
VTA1-203ENST00000452973 RAB2AP61019 212 aa9.68□□□□□ -0.86
VTA1-203ENST00000452973 AWAT1Q58HT5 328 aa9.68□□□□□ -0.86
VTA1-203ENST00000452973 SOHLH1Q5JUK2 328 aa9.68□□□□□ -0.86
VTA1-203ENST00000452973 OR4S2Q8NH73 311 aa9.68□□□□□ -0.86
VTA1-203ENST00000452973 CIB3Q96Q77 187 aaPredicted RBP9.68□□□□□ -0.86
VTA1-203ENST00000452973 MS4A5Q9H3V2 200 aa9.68□□□□□ -0.86
VTA1-203ENST00000452973 NDUFB3O43676 98 aa9.67□□□□□ -0.86
VTA1-203ENST00000452973 IGKV1-16P04430 117 aa9.67□□□□□ -0.86
VTA1-203ENST00000452973 APOBEC3AP31941 199 aaPredicted RBP9.67□□□□□ -0.86
VTA1-203ENST00000452973 TMEM200BQ69YZ2 307 aa9.67□□□□□ -0.86
VTA1-203ENST00000452973 CA5BP1Q8WTZ4 195 aa9.67□□□□□ -0.86
VTA1-203ENST00000452973 CLCC1Q96S66 551 aa9.67□□□□□ -0.86
VTA1-203ENST00000452973 ZNF251Q9BRH9 671 aa9.67□□□□□ -0.86
VTA1-203ENST00000452973 RPUSD1Q9UJJ7 312 aaKnown RBP9.67□□□□□ -0.86
VTA1-203ENST00000452973 AKAP6Q13023 2319 aa9.67□□□□□ -0.86
VTA1-203ENST00000452973 DVL1O14640 695 aa9.67□□□□□ -0.86
VTA1-203ENST00000452973 HOXA1P49639 335 aaPredicted RBP9.67□□□□□ -0.86
VTA1-203ENST00000452973 ZNF726P1Q15940 193 aa9.67□□□□□ -0.86
VTA1-203ENST00000452973 ZNF787Q6DD87 383 aa9.67□□□□□ -0.86
VTA1-203ENST00000452973 ZNF714Q96N38 554 aa9.67□□□□□ -0.86
VTA1-203ENST00000452973 LINC00312Q9Y6C7 94 aa9.67□□□□□ -0.86
VTA1-203ENST00000452973 H7C2Y5 167 aa9.67□□□□□ -0.86
VTA1-203ENST00000452973 DLX1P56177 255 aa9.67□□□□□ -0.86
VTA1-203ENST00000452973 OR4A47Q6IF82 309 aa9.67□□□□□ -0.86
VTA1-203ENST00000452973 ISOC2Q96AB3 205 aa9.67□□□□□ -0.86
VTA1-203ENST00000452973 PINX1Q96BK5 328 aaKnown RBP9.67□□□□□ -0.86
VTA1-203ENST00000452973 RCC1LQ96I51 464 aaKnown RBP9.67□□□□□ -0.86
VTA1-203ENST00000452973 TMEM147Q9BVK8 224 aa9.67□□□□□ -0.86
VTA1-203ENST00000452973 HIPK2Q9H2X6 1198 aa9.67□□□□□ -0.86
VTA1-203ENST00000452973 SLC25A22Q9H936 323 aa9.67□□□□□ -0.86
VTA1-203ENST00000452973 KIAA1456Q9P272 454 aa9.67□□□□□ -0.86
VTA1-203ENST00000452973 CTSZQ9UBR2 303 aa9.67□□□□□ -0.86
VTA1-203ENST00000452973 MALRD1Q5VYJ5 2156 aa9.67□□□□□ -0.86
VTA1-203ENST00000452973 IGHV1-69-2A0A0G2JMI3 117 aa9.66□□□□□ -0.86
VTA1-203ENST00000452973 RRHO14718 337 aa9.66□□□□□ -0.86
VTA1-203ENST00000452973 CHRNB4P30926 498 aa9.66□□□□□ -0.86
VTA1-203ENST00000452973 RELBQ01201 579 aa9.66□□□□□ -0.86
VTA1-203ENST00000452973 LRRC10Q5BKY1 277 aa9.66□□□□□ -0.86
VTA1-203ENST00000452973 ZCCHC14Q8WYQ9 949 aaKnown RBP9.66□□□□□ -0.86
VTA1-203ENST00000452973 DDB2Q92466 427 aa9.66□□□□□ -0.86
VTA1-203ENST00000452973 GAL3ST2Q9H3Q3 398 aa9.66□□□□□ -0.86
VTA1-203ENST00000452973 TET2Q6N021 2002 aaPredicted RBP9.66□□□□□ -0.86
VTA1-203ENST00000452973 C15orf62A8K5M9 175 aa9.66□□□□□ -0.86
VTA1-203ENST00000452973 PMS2P5A8MQ11 134 aa9.66□□□□□ -0.86
VTA1-203ENST00000452973 LY6HO94772 140 aa9.66□□□□□ -0.86
VTA1-203ENST00000452973 IGKV1D-33P01593 117 aa9.66□□□□□ -0.86
VTA1-203ENST00000452973 IGKV1-33P01594 117 aa9.66□□□□□ -0.86
VTA1-203ENST00000452973 IFNA4P05014 189 aa9.66□□□□□ -0.86
VTA1-203ENST00000452973 OR8U8P0C7N1 319 aa9.66□□□□□ -0.86
VTA1-203ENST00000452973 DHRS7BQ6IAN0 325 aaPredicted RBP9.66□□□□□ -0.86
VTA1-203ENST00000452973 ACSM6Q6P461 480 aa9.66□□□□□ -0.86
VTA1-203ENST00000452973 CYB561D1Q8N8Q1 229 aa9.66□□□□□ -0.86
VTA1-203ENST00000452973 ZNF709Q8N972 641 aa9.66□□□□□ -0.86
VTA1-203ENST00000452973 ZNF439Q8NDP4 499 aa9.66□□□□□ -0.86
VTA1-203ENST00000452973 SLC39A9Q9NUM3 307 aa9.66□□□□□ -0.86
VTA1-203ENST00000452973 C7orf77A4D0Y5 90 aa9.65□□□□□ -0.86
VTA1-203ENST00000452973 PPIHO43447 177 aaKnown RBP9.65□□□□□ -0.86
VTA1-203ENST00000452973 HBE1P02100 147 aa9.65□□□□□ -0.86
VTA1-203ENST00000452973 CT45A6P0DMU7 189 aa9.65□□□□□ -0.86
VTA1-203ENST00000452973 CT45A5P0DMU8 189 aa9.65□□□□□ -0.86
VTA1-203ENST00000452973 CT45A7P0DMV0 189 aa9.65□□□□□ -0.86
VTA1-203ENST00000452973 THBS3P49746 956 aa9.65□□□□□ -0.86
VTA1-203ENST00000452973 SPCS3P61009 180 aa9.65□□□□□ -0.86
VTA1-203ENST00000452973 HFEQ30201 348 aa9.65□□□□□ -0.86
VTA1-203ENST00000452973 MUC15Q8N387 334 aa9.65□□□□□ -0.86
VTA1-203ENST00000452973 SLC35D1Q9NTN3 355 aa9.65□□□□□ -0.86
VTA1-203ENST00000452973 RBFOX2O43251 390 aaKnown RBP eCLIP9.65□□□□□ -0.86
VTA1-203ENST00000452973 SIAH2O43255 324 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms