RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 NF1P21359 2839 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 TRIM77I1YAP6 450 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 ARPC1BO15143 372 aaKnown RBP9.23□□□□□ -0.93
SCN9A-204ENST00000452182 SHOXO15266 292 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 NBR2O15453 112 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 CHST1O43916 411 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 PTTG1O95997 202 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 VSIG10L2P0DP72 767 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 AKR1C4P17516 323 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 UCP1P25874 307 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 F2RL1P55085 397 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 SUPT4H1P63272 117 aaKnown RBP9.23□□□□□ -0.93
SCN9A-204ENST00000452182 MMDQ15546 238 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 POU2AF1Q16633 256 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 CADM3Q8N126 398 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 FAM71E2Q8N5Q1 922 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 TMEM222Q9H0R3 208 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 TNFRSF19Q9NS68 423 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 NUDT15Q9NV35 164 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 SRRM4A7MD48 611 aaKnown RBP9.22□□□□□ -0.93
SCN9A-204ENST00000452182 CDS2O95674 445 aa9.22□□□□□ -0.93
SCN9A-204ENST00000452182 HRASP01112 189 aa9.22□□□□□ -0.93
SCN9A-204ENST00000452182 IGLV2-23P01705 113 aa9.22□□□□□ -0.93
SCN9A-204ENST00000452182 AMY1AP04745 511 aa9.22□□□□□ -0.93
SCN9A-204ENST00000452182 SERPINE2P07093 398 aa9.22□□□□□ -0.93
SCN9A-204ENST00000452182 NQO2P16083 231 aa9.22□□□□□ -0.93
SCN9A-204ENST00000452182 RAG2P55895 527 aa9.22□□□□□ -0.93
SCN9A-204ENST00000452182 C5orf56Q8N8D9 126 aa9.22□□□□□ -0.93
SCN9A-204ENST00000452182 Q8N9W7 124 aa9.22□□□□□ -0.93
SCN9A-204ENST00000452182 GLYATL2Q8WU03 294 aa9.22□□□□□ -0.93
SCN9A-204ENST00000452182 RBMXL1Q96E39 390 aaKnown RBP9.22□□□□□ -0.93
SCN9A-204ENST00000452182 KIAA1456Q9P272 454 aa9.22□□□□□ -0.93
SCN9A-204ENST00000452182 PIGBOS1A0A0B4J2F0 54 aa9.21□□□□□ -0.93
SCN9A-204ENST00000452182 FAM181BA6NEQ2 426 aa9.21□□□□□ -0.93
SCN9A-204ENST00000452182 NCBP2LA6PVI3 153 aaKnown RBP9.21□□□□□ -0.93
SCN9A-204ENST00000452182 RRHO14718 337 aa9.21□□□□□ -0.93
SCN9A-204ENST00000452182 S1PR2O95136 353 aa9.21□□□□□ -0.93
SCN9A-204ENST00000452182 CRYGBP07316 175 aa9.21□□□□□ -0.93
SCN9A-204ENST00000452182 H2AFB2P0C5Z0 115 aa9.21□□□□□ -0.93
SCN9A-204ENST00000452182 OR5AC1P0C628 307 aa9.21□□□□□ -0.93
SCN9A-204ENST00000452182 ANXA3P12429 323 aa9.21□□□□□ -0.93
SCN9A-204ENST00000452182 CNTFRP26992 372 aa9.21□□□□□ -0.93
SCN9A-204ENST00000452182 LPAR6P43657 344 aa9.21□□□□□ -0.93
SCN9A-204ENST00000452182 UBE2KP61086 200 aa9.21□□□□□ -0.93
SCN9A-204ENST00000452182 PPP1R1AQ13522 171 aa9.21□□□□□ -0.93
SCN9A-204ENST00000452182 PSG5Q15238 335 aa9.21□□□□□ -0.93
SCN9A-204ENST00000452182 SP6Q3SY56 376 aa9.21□□□□□ -0.93
SCN9A-204ENST00000452182 VMA21Q3ZAQ7 101 aa9.21□□□□□ -0.93
SCN9A-204ENST00000452182 PLET1Q6UQ28 207 aa9.21□□□□□ -0.93
SCN9A-204ENST00000452182 TEX45Q8NA69 505 aa9.21□□□□□ -0.93
SCN9A-204ENST00000452182 VSTM2AQ8TAG5 236 aa9.21□□□□□ -0.93
SCN9A-204ENST00000452182 RHOVQ96L33 236 aa9.21□□□□□ -0.93
SCN9A-204ENST00000452182 TMEM56Q96MV1 263 aa9.21□□□□□ -0.93
SCN9A-204ENST00000452182 MARVELD1Q9BSK0 173 aa9.21□□□□□ -0.93
SCN9A-204ENST00000452182 NPFFR1Q9GZQ6 430 aa9.21□□□□□ -0.93
SCN9A-204ENST00000452182 RANBP3Q9H6Z4 567 aaPredicted RBP9.21□□□□□ -0.93
SCN9A-204ENST00000452182 TMEM56-RWDD3S4R434 201 aa9.21□□□□□ -0.93
SCN9A-204ENST00000452182 TRAV6A0A075B6T7 132 aa9.2□□□□□ -0.94
SCN9A-204ENST00000452182 MARCH11A6NNE9 402 aa9.2□□□□□ -0.94
SCN9A-204ENST00000452182 PEX14O75381 377 aa9.2□□□□□ -0.94
SCN9A-204ENST00000452182 SFT2D2O95562 160 aa9.2□□□□□ -0.94
SCN9A-204ENST00000452182 OR4E1P0C645 316 aa9.2□□□□□ -0.94
SCN9A-204ENST00000452182 ANXA7P20073 488 aaKnown RBP9.2□□□□□ -0.94
SCN9A-204ENST00000452182 SRPXP78539 464 aa9.2□□□□□ -0.94
SCN9A-204ENST00000452182 TMEM187Q14656 261 aa9.2□□□□□ -0.94
SCN9A-204ENST00000452182 C5orf64Q2M2E5 130 aa9.2□□□□□ -0.94
SCN9A-204ENST00000452182 RGS21Q2M5E4 152 aa9.2□□□□□ -0.94
SCN9A-204ENST00000452182 IL22RA2Q969J5 263 aa9.2□□□□□ -0.94
SCN9A-204ENST00000452182 BET1LQ9NYM9 111 aa9.2□□□□□ -0.94
SCN9A-204ENST00000452182 SIGLEC9Q9Y336 463 aa9.2□□□□□ -0.94
SCN9A-204ENST00000452182 SETD2Q9BYW2 2564 aaPredicted RBP9.2□□□□□ -0.94
SCN9A-204ENST00000452182 EREGO14944 169 aa9.2□□□□□ -0.94
SCN9A-204ENST00000452182 SLC25A17O43808 307 aa9.2□□□□□ -0.94
SCN9A-204ENST00000452182 TSPAN9O75954 239 aa9.2□□□□□ -0.94
SCN9A-204ENST00000452182 ATG12O94817 140 aa9.2□□□□□ -0.94
SCN9A-204ENST00000452182 IGKV1-39P01597 117 aa9.2□□□□□ -0.94
SCN9A-204ENST00000452182 HLA-DRB1P01911 266 aa9.2□□□□□ -0.94
SCN9A-204ENST00000452182 IGKV1D-39P04432 117 aa9.2□□□□□ -0.94
SCN9A-204ENST00000452182 IL6RP08887 468 aaPredicted RBP9.2□□□□□ -0.94
SCN9A-204ENST00000452182 FGF2P09038 288 aa9.2□□□□□ -0.94
SCN9A-204ENST00000452182 SAA1P0DJI8 122 aaPredicted RBP9.2□□□□□ -0.94
SCN9A-204ENST00000452182 PPP1R27Q86WC6 154 aa9.2□□□□□ -0.94
SCN9A-204ENST00000452182 PRIMA1Q86XR5 153 aa9.2□□□□□ -0.94
SCN9A-204ENST00000452182 PUSL1Q8N0Z8 303 aaKnown RBP9.2□□□□□ -0.94
SCN9A-204ENST00000452182 LRTM2Q8N967 370 aa9.2□□□□□ -0.94
SCN9A-204ENST00000452182 RBPMSQ93062 196 aaKnown RBP9.2□□□□□ -0.94
SCN9A-204ENST00000452182 R3HDM4Q96D70 268 aa9.2□□□□□ -0.94
SCN9A-204ENST00000452182 SEC22AQ96IW7 307 aa9.2□□□□□ -0.94
SCN9A-204ENST00000452182 RASL11BQ9BPW5 248 aa9.2□□□□□ -0.94
SCN9A-204ENST00000452182 METTL1Q9UBP6 276 aaKnown RBP9.2□□□□□ -0.94
SCN9A-204ENST00000452182 C9orf170A2RU37 121 aa9.19□□□□□ -0.94
SCN9A-204ENST00000452182 CREBL2O60519 120 aaPredicted RBP9.19□□□□□ -0.94
SCN9A-204ENST00000452182 KBTBD11O94819 623 aa9.19□□□□□ -0.94
SCN9A-204ENST00000452182 OR2A4O95047 310 aa9.19□□□□□ -0.94
SCN9A-204ENST00000452182 DUS4LO95620 317 aaKnown RBP9.19□□□□□ -0.94
SCN9A-204ENST00000452182 KRASP01116 189 aa9.19□□□□□ -0.94
SCN9A-204ENST00000452182 HLA-AP01891 365 aaKnown RBP9.19□□□□□ -0.94
SCN9A-204ENST00000452182 IL5P05113 134 aa9.19□□□□□ -0.94
SCN9A-204ENST00000452182 CRYBA1P05813 215 aa9.19□□□□□ -0.94
SCN9A-204ENST00000452182 ERVK-16P61578 105 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms