RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-209	ENST00000451859	TRAV18	A0A075B6X5	111 aa		6.68	□□□□□ -1.34
RFX3-209	ENST00000451859	IGKV1D-13	A0A0B4J2D9	117 aa		6.68	□□□□□ -1.34
RFX3-209	ENST00000451859	SSX5	O60225	188 aa		6.68	□□□□□ -1.34
RFX3-209	ENST00000451859	HSPB1	P04792	205 aa	Known RBP	6.68	□□□□□ -1.34
RFX3-209	ENST00000451859	CRYGB	P07316	175 aa		6.68	□□□□□ -1.34
RFX3-209	ENST00000451859	IGKV1-13	P0DP09	117 aa		6.68	□□□□□ -1.34
RFX3-209	ENST00000451859	RRAS	P10301	218 aa		6.68	□□□□□ -1.34
RFX3-209	ENST00000451859	SPN	P16150	400 aa		6.68	□□□□□ -1.34
RFX3-209	ENST00000451859	TGFBR1	P36897	503 aa		6.68	□□□□□ -1.34
RFX3-209	ENST00000451859	LGALS7	P47929	136 aa		6.68	□□□□□ -1.34
RFX3-209	ENST00000451859	RPL30	P62888	115 aa	Known RBP	6.68	□□□□□ -1.34
RFX3-209	ENST00000451859	VMA21	Q3ZAQ7	101 aa		6.68	□□□□□ -1.34
RFX3-209	ENST00000451859	KCTD9	Q7L273	389 aa		6.68	□□□□□ -1.34
RFX3-209	ENST00000451859	ZNF645	Q8N7E2	425 aa		6.68	□□□□□ -1.34
RFX3-209	ENST00000451859	TCTEX1D2	Q8WW35	142 aa		6.68	□□□□□ -1.34
RFX3-209	ENST00000451859	ADTRP	Q96IZ2	230 aa		6.68	□□□□□ -1.34
RFX3-209	ENST00000451859	GPHA2	Q96T91	129 aa		6.68	□□□□□ -1.34
RFX3-209	ENST00000451859	YTHDF1	Q9BYJ9	559 aa	Known RBP	6.68	□□□□□ -1.34
RFX3-209	ENST00000451859	SLA2	Q9H6Q3	261 aa		6.68	□□□□□ -1.34
RFX3-209	ENST00000451859	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	6.68	□□□□□ -1.34
RFX3-209	ENST00000451859	SPATA2	Q9UM82	520 aa		6.68	□□□□□ -1.34
RFX3-209	ENST00000451859	OR2W1	Q9Y3N9	320 aa		6.68	□□□□□ -1.34
RFX3-209	ENST00000451859	LSM4	Q9Y4Z0	139 aa	Known RBP	6.68	□□□□□ -1.34
RFX3-209	ENST00000451859	MEIS3P1	A6NDR6	274 aa		6.67	□□□□□ -1.34
RFX3-209	ENST00000451859	MSGN1	A6NI15	193 aa		6.67	□□□□□ -1.34
RFX3-209	ENST00000451859	SCGN	O76038	276 aa		6.67	□□□□□ -1.34
RFX3-209	ENST00000451859	DIRAS3	O95661	229 aa		6.67	□□□□□ -1.34
RFX3-209	ENST00000451859	PRH1	P02810	166 aa		6.67	□□□□□ -1.34
RFX3-209	ENST00000451859	SAA1	P0DJI8	122 aa	Predicted RBP	6.67	□□□□□ -1.34
RFX3-209	ENST00000451859	INSL3	P51460	131 aa		6.67	□□□□□ -1.34
RFX3-209	ENST00000451859	ARPC4	P59998	168 aa		6.67	□□□□□ -1.34
RFX3-209	ENST00000451859	UBE2K	P61086	200 aa		6.67	□□□□□ -1.34
RFX3-209	ENST00000451859	SRSF7	Q16629	238 aa	Known RBP eCLIP	6.67	□□□□□ -1.34
RFX3-209	ENST00000451859	MRGPRG-AS1	Q2M3A8	158 aa		6.67	□□□□□ -1.34
RFX3-209	ENST00000451859	C10orf55	Q5SWW7	151 aa		6.67	□□□□□ -1.34
RFX3-209	ENST00000451859	CNIH2	Q6PI25	160 aa		6.67	□□□□□ -1.34
RFX3-209	ENST00000451859		Q6ZS49	121 aa		6.67	□□□□□ -1.34
RFX3-209	ENST00000451859	OVCH2	Q7RTZ1	564 aa		6.67	□□□□□ -1.34
RFX3-209	ENST00000451859	ZNF429	Q86V71	674 aa		6.67	□□□□□ -1.34
RFX3-209	ENST00000451859	VKORC1L1	Q8N0U8	176 aa		6.67	□□□□□ -1.34
RFX3-209	ENST00000451859	GVQW1	Q8N7I0	195 aa		6.67	□□□□□ -1.34
RFX3-209	ENST00000451859	SECTM1	Q8WVN6	248 aa		6.67	□□□□□ -1.34
RFX3-209	ENST00000451859	SRSF12	Q8WXF0	261 aa	Known RBP	6.67	□□□□□ -1.34
RFX3-209	ENST00000451859	DDB2	Q92466	427 aa		6.67	□□□□□ -1.34
RFX3-209	ENST00000451859	SLC25A38	Q96DW6	304 aa		6.67	□□□□□ -1.34
RFX3-209	ENST00000451859	RHOV	Q96L33	236 aa		6.67	□□□□□ -1.34
RFX3-209	ENST00000451859	OR4C12	Q96R67	309 aa		6.67	□□□□□ -1.34
RFX3-209	ENST00000451859	ZNF430	Q9H8G1	570 aa	Predicted RBP	6.67	□□□□□ -1.34
RFX3-209	ENST00000451859	TAS2R8	Q9NYW2	309 aa		6.67	□□□□□ -1.34
RFX3-209	ENST00000451859	ANXA10	Q9UJ72	324 aa		6.67	□□□□□ -1.34
RFX3-209	ENST00000451859	ADAM30	Q9UKF2	790 aa		6.67	□□□□□ -1.34
RFX3-209	ENST00000451859	RBMX2	Q9Y388	322 aa	Known RBP	6.67	□□□□□ -1.34
RFX3-209	ENST00000451859	ETV7	Q9Y603	341 aa		6.67	□□□□□ -1.34
RFX3-209	ENST00000451859	KMT2C	Q8NEZ4	4911 aa	Known RBP	6.66	□□□□□ -1.34
RFX3-209	ENST00000451859		H3BUA1	57 aa		6.66	□□□□□ -1.34
RFX3-209	ENST00000451859	TNFSF12	O43508	249 aa		6.66	□□□□□ -1.34
RFX3-209	ENST00000451859	ACTL6B	O94805	426 aa		6.66	□□□□□ -1.34
RFX3-209	ENST00000451859	TRBV12-3	P01733	135 aa		6.66	□□□□□ -1.34
RFX3-209	ENST00000451859	HLA-DQB1	P01920	261 aa		6.66	□□□□□ -1.34
RFX3-209	ENST00000451859	CTXN2	P0C2S0	81 aa		6.66	□□□□□ -1.34
RFX3-209	ENST00000451859	OR9G9	P0C7N8	305 aa		6.66	□□□□□ -1.34
RFX3-209	ENST00000451859	FXYD4	P59646	89 aa		6.66	□□□□□ -1.34
RFX3-209	ENST00000451859	LSM3	P62310	102 aa	Known RBP	6.66	□□□□□ -1.34
RFX3-209	ENST00000451859	PRSS8	Q16651	343 aa		6.66	□□□□□ -1.34
RFX3-209	ENST00000451859	KCTD21	Q4G0X4	260 aa		6.66	□□□□□ -1.34
RFX3-209	ENST00000451859	ACSM6	Q6P461	480 aa		6.66	□□□□□ -1.34
RFX3-209	ENST00000451859	TEX45	Q8NA69	505 aa		6.66	□□□□□ -1.34
RFX3-209	ENST00000451859	BEST4	Q8NFU0	473 aa		6.66	□□□□□ -1.34
RFX3-209	ENST00000451859	OR6Q1	Q8NGQ2	317 aa		6.66	□□□□□ -1.34
RFX3-209	ENST00000451859	OSR1	Q8TAX0	266 aa	Predicted RBP	6.66	□□□□□ -1.34
RFX3-209	ENST00000451859	TINAGL1	Q9GZM7	467 aa	Predicted RBP	6.66	□□□□□ -1.34
RFX3-209	ENST00000451859	DCSTAMP	Q9H295	470 aa		6.66	□□□□□ -1.34
RFX3-209	ENST00000451859	MRPS7	Q9Y2R9	242 aa	Known RBP	6.66	□□□□□ -1.34
RFX3-209	ENST00000451859	PRELID3B	Q9Y3B1	194 aa		6.66	□□□□□ -1.34
RFX3-209	ENST00000451859	SMAD5-AS1	Q9Y6J3	95 aa		6.66	□□□□□ -1.34
RFX3-209	ENST00000451859		U3KQK5	164 aa		6.66	□□□□□ -1.34
RFX3-209	ENST00000451859		A0A0G2JLM5	398 aa		6.65	□□□□□ -1.34
RFX3-209	ENST00000451859	HMX3	A6NHT5	357 aa		6.65	□□□□□ -1.34
RFX3-209	ENST00000451859	TRIM64C	A6NLI5	447 aa		6.65	□□□□□ -1.34
RFX3-209	ENST00000451859	AIRE	O43918	545 aa		6.65	□□□□□ -1.34
RFX3-209	ENST00000451859	RBMXL2	O75526	392 aa	Known RBP	6.65	□□□□□ -1.34
RFX3-209	ENST00000451859	IGLV2-14	P01704	120 aa		6.65	□□□□□ -1.34
RFX3-209	ENST00000451859	GP9	P14770	177 aa		6.65	□□□□□ -1.34
RFX3-209	ENST00000451859	ZP3	P21754	424 aa		6.65	□□□□□ -1.34
RFX3-209	ENST00000451859	AADAC	P22760	399 aa		6.65	□□□□□ -1.34
RFX3-209	ENST00000451859	FCGR2C	P31995	323 aa		6.65	□□□□□ -1.34
RFX3-209	ENST00000451859	SYNJ2BP	P57105	145 aa		6.65	□□□□□ -1.34
RFX3-209	ENST00000451859	DYRK1A	Q13627	763 aa		6.65	□□□□□ -1.34
RFX3-209	ENST00000451859	EXOSC2	Q13868	293 aa	Known RBP	6.65	□□□□□ -1.34
RFX3-209	ENST00000451859	CDK10	Q15131	360 aa		6.65	□□□□□ -1.34
RFX3-209	ENST00000451859	C19orf35	Q6ZS72	473 aa		6.65	□□□□□ -1.34
RFX3-209	ENST00000451859	SSX9	Q7RTT3	188 aa		6.65	□□□□□ -1.34
RFX3-209	ENST00000451859	TMEM17	Q86X19	198 aa		6.65	□□□□□ -1.34
RFX3-209	ENST00000451859	ANKRD13B	Q86YJ7	626 aa		6.65	□□□□□ -1.34
RFX3-209	ENST00000451859	MMD2	Q8IY49	270 aa		6.65	□□□□□ -1.34
RFX3-209	ENST00000451859	ADAD2	Q8NCV1	583 aa	Known RBP	6.65	□□□□□ -1.34
RFX3-209	ENST00000451859	OR13F1	Q8NGS4	319 aa		6.65	□□□□□ -1.34
RFX3-209	ENST00000451859	OR4S2	Q8NH73	311 aa		6.65	□□□□□ -1.34
RFX3-209	ENST00000451859	WWC2-AS2	Q96NR7	200 aa		6.65	□□□□□ -1.34
RFX3-209	ENST00000451859	FYTTD1	Q96QD9	318 aa	Known RBP	6.65	□□□□□ -1.34

Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms