RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 TMEM187Q14656 261 aa10.41□□□□□ -0.74
VPS33A-202ENST00000451053 RTL8BQ17RB0 113 aa10.41□□□□□ -0.74
VPS33A-202ENST00000451053 DHRS7BQ6IAN0 325 aaPredicted RBP10.41□□□□□ -0.74
VPS33A-202ENST00000451053 LIN54Q6MZP7 749 aa10.41□□□□□ -0.74
VPS33A-202ENST00000451053 CADM3Q8N126 398 aa10.41□□□□□ -0.74
VPS33A-202ENST00000451053 Q8N6K4 173 aa10.41□□□□□ -0.74
VPS33A-202ENST00000451053 LRTM2Q8N967 370 aa10.41□□□□□ -0.74
VPS33A-202ENST00000451053 OR5AN1Q8NGI8 311 aa10.41□□□□□ -0.74
VPS33A-202ENST00000451053 OR2T10Q8NGZ9 312 aa10.41□□□□□ -0.74
VPS33A-202ENST00000451053 DDB2Q92466 427 aa10.41□□□□□ -0.74
VPS33A-202ENST00000451053 TP53RKQ96S44 253 aa10.41□□□□□ -0.74
VPS33A-202ENST00000451053 SLC25A33Q9BSK2 321 aa10.41□□□□□ -0.74
VPS33A-202ENST00000451053 PITPNC1Q9UKF7 332 aa10.41□□□□□ -0.74
VPS33A-202ENST00000451053 ZFHX3Q15911 3703 aa10.41□□□□□ -0.74
VPS33A-202ENST00000451053 HMX3A6NHT5 357 aa10.4□□□□□ -0.74
VPS33A-202ENST00000451053 OR2F2O95006 317 aa10.4□□□□□ -0.74
VPS33A-202ENST00000451053 MC5RP33032 325 aa10.4□□□□□ -0.74
VPS33A-202ENST00000451053 KRTAP24-1Q3LI83 254 aa10.4□□□□□ -0.74
VPS33A-202ENST00000451053 SP6Q3SY56 376 aa10.4□□□□□ -0.74
VPS33A-202ENST00000451053 ZNF695Q8IW36 515 aa10.4□□□□□ -0.74
VPS33A-202ENST00000451053 SPAG16Q8N0X2 631 aa10.4□□□□□ -0.74
VPS33A-202ENST00000451053 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.4□□□□□ -0.74
VPS33A-202ENST00000451053 UXS1Q8NBZ7 420 aa10.4□□□□□ -0.74
VPS33A-202ENST00000451053 OR4S2Q8NH73 311 aa10.4□□□□□ -0.74
VPS33A-202ENST00000451053 GLYATL2Q8WU03 294 aa10.4□□□□□ -0.74
VPS33A-202ENST00000451053 CHAC2Q8WUX2 184 aa10.4□□□□□ -0.74
VPS33A-202ENST00000451053 RITA1Q96K30 269 aa10.4□□□□□ -0.74
VPS33A-202ENST00000451053 TMEM56Q96MV1 263 aa10.4□□□□□ -0.74
VPS33A-202ENST00000451053 RBM14Q96PK6 669 aaKnown RBP10.4□□□□□ -0.74
VPS33A-202ENST00000451053 RAB18Q9NP72 206 aa10.4□□□□□ -0.74
VPS33A-202ENST00000451053 SLC35D1Q9NTN3 355 aa10.4□□□□□ -0.74
VPS33A-202ENST00000451053 WASHC3Q9Y3C0 194 aa10.4□□□□□ -0.74
VPS33A-202ENST00000451053 TMEM56-RWDD3S4R434 201 aa10.4□□□□□ -0.74
VPS33A-202ENST00000451053 H7C2Y5 167 aa10.39□□□□□ -0.75
VPS33A-202ENST00000451053 FCGR3BO75015 233 aa10.39□□□□□ -0.75
VPS33A-202ENST00000451053 CDS2O95674 445 aa10.39□□□□□ -0.75
VPS33A-202ENST00000451053 IFNA21P01568 189 aa10.39□□□□□ -0.75
VPS33A-202ENST00000451053 IGKV1-16P04430 117 aa10.39□□□□□ -0.75
VPS33A-202ENST00000451053 SULT1A3P0DMM9 295 aa10.39□□□□□ -0.75
VPS33A-202ENST00000451053 SULT1A4P0DMN0 295 aa10.39□□□□□ -0.75
VPS33A-202ENST00000451053 CNTFRP26992 372 aa10.39□□□□□ -0.75
VPS33A-202ENST00000451053 ANKRD55Q3KP44 614 aa10.39□□□□□ -0.75
VPS33A-202ENST00000451053 OR2B11Q5JQS5 317 aa10.39□□□□□ -0.75
VPS33A-202ENST00000451053 TMEM268Q5VZI3 342 aa10.39□□□□□ -0.75
VPS33A-202ENST00000451053 PDPNQ86YL7 162 aa10.39□□□□□ -0.75
VPS33A-202ENST00000451053 RBPMSQ93062 196 aaKnown RBP10.39□□□□□ -0.75
VPS33A-202ENST00000451053 AIFM2Q9BRQ8 373 aa10.39□□□□□ -0.75
VPS33A-202ENST00000451053 COMMD9Q9P000 198 aa10.39□□□□□ -0.75
VPS33A-202ENST00000451053 NF1P21359 2839 aa10.39□□□□□ -0.75
VPS33A-202ENST00000451053 NIPBLQ6KC79 2804 aaeCLIP10.39□□□□□ -0.75
VPS33A-202ENST00000451053 DBX1A6NMT0 343 aa10.38□□□□□ -0.75
VPS33A-202ENST00000451053 HPRT1P00492 218 aa10.38□□□□□ -0.75
VPS33A-202ENST00000451053 HLA-GP17693 338 aa10.38□□□□□ -0.75
VPS33A-202ENST00000451053 F2RL1P55085 397 aa10.38□□□□□ -0.75
VPS33A-202ENST00000451053 BRWD1-AS2P59051 145 aa10.38□□□□□ -0.75
VPS33A-202ENST00000451053 RELBQ01201 579 aa10.38□□□□□ -0.75
VPS33A-202ENST00000451053 C16orf82Q7Z2V1 217 aa10.38□□□□□ -0.75
VPS33A-202ENST00000451053 ASB13Q8WXK3 278 aa10.38□□□□□ -0.75
VPS33A-202ENST00000451053 PLEKHA2Q9HB19 425 aa10.38□□□□□ -0.75
VPS33A-202ENST00000451053 PLSCR3Q9NRY6 295 aa10.38□□□□□ -0.75
VPS33A-202ENST00000451053 C1RLQ9NZP8 487 aa10.38□□□□□ -0.75
VPS33A-202ENST00000451053 MGAT4CQ9UBM8 478 aa10.38□□□□□ -0.75
VPS33A-202ENST00000451053 MOB4Q9Y3A3 225 aa10.38□□□□□ -0.75
VPS33A-202ENST00000451053 TMED3Q9Y3Q3 217 aa10.38□□□□□ -0.75
VPS33A-202ENST00000451053 SETD2Q9BYW2 2564 aaPredicted RBP10.37□□□□□ -0.75
VPS33A-202ENST00000451053 JMJD1CQ15652 2540 aa10.37□□□□□ -0.75
VPS33A-202ENST00000451053 SH2D7A6NKC9 451 aaPredicted RBP10.37□□□□□ -0.75
VPS33A-202ENST00000451053 GOSR2O14653 212 aa10.37□□□□□ -0.75
VPS33A-202ENST00000451053 AMY1AP04745 511 aa10.37□□□□□ -0.75
VPS33A-202ENST00000451053 CRYBA1P05813 215 aa10.37□□□□□ -0.75
VPS33A-202ENST00000451053 VDAC1P21796 283 aa10.37□□□□□ -0.75
VPS33A-202ENST00000451053 LPAR6P43657 344 aa10.37□□□□□ -0.75
VPS33A-202ENST00000451053 AKR1C2P52895 323 aa10.37□□□□□ -0.75
VPS33A-202ENST00000451053 RPL15P61313 204 aaKnown RBP10.37□□□□□ -0.75
VPS33A-202ENST00000451053 ERVK-16P61578 105 aa10.37□□□□□ -0.75
VPS33A-202ENST00000451053 FCN2Q15485 313 aa10.37□□□□□ -0.75
VPS33A-202ENST00000451053 MMDQ15546 238 aa10.37□□□□□ -0.75
VPS33A-202ENST00000451053 ZNF585BQ52M93 769 aa10.37□□□□□ -0.75
VPS33A-202ENST00000451053 FAM219AQ8IW50 185 aa10.37□□□□□ -0.75
VPS33A-202ENST00000451053 SELENOHQ8IZQ5 122 aaKnown RBP10.37□□□□□ -0.75
VPS33A-202ENST00000451053 OR5M8Q8NGP6 311 aa10.37□□□□□ -0.75
VPS33A-202ENST00000451053 RNASE11Q8TAA1 199 aaKnown RBP10.37□□□□□ -0.75
VPS33A-202ENST00000451053 OSR1Q8TAX0 266 aaPredicted RBP10.37□□□□□ -0.75
VPS33A-202ENST00000451053 RRNAD1Q96FB5 475 aaKnown RBP10.37□□□□□ -0.75
VPS33A-202ENST00000451053 SPIN2AQ99865 258 aa10.37□□□□□ -0.75
VPS33A-202ENST00000451053 SPIN2BQ9BPZ2 258 aa10.37□□□□□ -0.75
VPS33A-202ENST00000451053 PRR13Q9NZ81 148 aa10.37□□□□□ -0.75
VPS33A-202ENST00000451053 NCBP2LA6PVI3 153 aaKnown RBP10.36□□□□□ -0.75
VPS33A-202ENST00000451053 NBR2O15453 112 aa10.36□□□□□ -0.75
VPS33A-202ENST00000451053 RAMP3O60896 148 aa10.36□□□□□ -0.75
VPS33A-202ENST00000451053 CRYZL1O95825 349 aa10.36□□□□□ -0.75
VPS33A-202ENST00000451053 HRASP01112 189 aa10.36□□□□□ -0.75
VPS33A-202ENST00000451053 RPS16P62249 146 aaKnown RBP10.36□□□□□ -0.75
VPS33A-202ENST00000451053 BLCAPP62952 87 aa10.36□□□□□ -0.75
VPS33A-202ENST00000451053 TMEM177Q53S58 311 aa10.36□□□□□ -0.75
VPS33A-202ENST00000451053 GSG1LQ6UXU4 331 aa10.36□□□□□ -0.75
VPS33A-202ENST00000451053 Q6ZS46 218 aa10.36□□□□□ -0.75
VPS33A-202ENST00000451053 Q6ZSV7 163 aa10.36□□□□□ -0.75
VPS33A-202ENST00000451053 AKAP14Q86UN6 197 aa10.36□□□□□ -0.75
VPS33A-202ENST00000451053 SLC35G3Q8N808 338 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms