RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 GUCD1Q96NT3 240 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 TXNDC17Q9BRA2 123 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 HES4Q9HCC6 221 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 GPR27Q9NS67 375 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 ALKBH4Q9NXW9 302 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 PSG11Q9UQ72 335 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 SPAG17Q6Q759 2223 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 LIPT2A6NK58 231 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 H3BML4 177 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 M0R2Z0 102 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 IGKV1-39P01597 117 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 IGKV1-5P01602 117 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 HLA-DQA1P01909 254 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 IGKV1D-39P04432 117 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 AZU1P20160 251 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 SSTR5P35346 364 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 RPS21P63220 83 aaKnown RBP7.25□□□□□ -1.25
LSM5-208ENST00000450169 TMEM249Q2WGJ8 235 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 RNFT1Q5M7Z0 435 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 OOSP2Q86WS3 158 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 OR1L1Q8NH94 360 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 TMEM204Q9BSN7 226 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 COMMD5Q9GZQ3 224 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 V9GYV3 84 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 OR4C46A6NHA9 309 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 C2orf70A6NJV1 201 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 GDF1P27539 372 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 TNXAQ16473 311 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 HLA-DQA1Q5Y7H0 255 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 LILRA6Q6PI73 481 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 C1orf229Q6ZS94 237 aaPredicted RBP7.24□□□□□ -1.25
LSM5-208ENST00000450169 OR10W1Q8NGF6 305 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 C18orf32Q8TCD1 76 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 MMABQ96EY8 250 aaPredicted RBP7.24□□□□□ -1.25
LSM5-208ENST00000450169 ULBP2Q9BZM5 246 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 NPVFQ9HCQ7 196 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 PLSCR4Q9NRQ2 329 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 PILRBQ9UKJ0 227 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 HS3ST3A1Q9Y663 406 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 THADAQ6YHU6 1953 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 TRAV38-1A0A0B4J264 116 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 KIR2DS1A0A191URI9 304 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 FAM231BA6NCW3 169 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 TRAPPC2LH3BP13 241 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 M0R135 149 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 CGAP01215 116 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 IGKV3-11P04433 115 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 AMY1AP04745 511 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 EN2P19622 333 aaPredicted RBP7.24□□□□□ -1.25
LSM5-208ENST00000450169 KIR2DS4P43632 304 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 SLC35B1P78383 322 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 SMAGPQ0VAQ4 97 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 KIR2DS1Q14954 304 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 TMEM177Q53S58 311 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 SPATA12Q7Z6I5 190 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 RAB1CQ92928 201 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 ZNF799Q96GE5 643 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 ZNF48Q96MX3 618 aaPredicted RBP7.24□□□□□ -1.25
LSM5-208ENST00000450169 GTSF1LQ9H1H1 148 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 FNDC4Q9H6D8 234 aaPredicted RBP7.24□□□□□ -1.25
LSM5-208ENST00000450169 IL23AQ9NPF7 189 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 ARL2-SNX15V9GYD0 113 aa7.24□□□□□ -1.25
LSM5-208ENST00000450169 RALGAPA1Q6GYQ0 2036 aa7.23□□□□□ -1.25
LSM5-208ENST00000450169 IGKV1-6A0A0C4DH72 117 aa7.23□□□□□ -1.25
LSM5-208ENST00000450169 A0A1W2PPV4 95 aa7.23□□□□□ -1.25
LSM5-208ENST00000450169 SLC31A1O15431 190 aa7.23□□□□□ -1.25
LSM5-208ENST00000450169 HLA-DRB1P01911 266 aa7.23□□□□□ -1.25
LSM5-208ENST00000450169 APCSP02743 223 aa7.23□□□□□ -1.25
LSM5-208ENST00000450169 SMIM17P0DL12 118 aa7.23□□□□□ -1.25
LSM5-208ENST00000450169 MC5RP33032 325 aa7.23□□□□□ -1.25
LSM5-208ENST00000450169 PTGDSP41222 190 aa7.23□□□□□ -1.25
LSM5-208ENST00000450169 HIST1H1AQ02539 215 aaPredicted RBP7.23□□□□□ -1.25
LSM5-208ENST00000450169 TGFBR3Q03167 851 aa7.23□□□□□ -1.25
LSM5-208ENST00000450169 SRSF7Q16629 238 aaKnown RBP eCLIP7.23□□□□□ -1.25
LSM5-208ENST00000450169 GJC3Q8NFK1 279 aa7.23□□□□□ -1.25
LSM5-208ENST00000450169 OR2AE1Q8NHA4 323 aa7.23□□□□□ -1.25
LSM5-208ENST00000450169 OR1F12Q8NHA8 337 aa7.23□□□□□ -1.25
LSM5-208ENST00000450169 PATE1Q8WXA2 126 aa7.23□□□□□ -1.25
LSM5-208ENST00000450169 ST8SIA1Q92185 356 aa7.23□□□□□ -1.25
LSM5-208ENST00000450169 BADQ92934 168 aa7.23□□□□□ -1.25
LSM5-208ENST00000450169 TSACCQ96A04 125 aaPredicted RBP7.23□□□□□ -1.25
LSM5-208ENST00000450169 TMEM70Q9BUB7 260 aa7.23□□□□□ -1.25
LSM5-208ENST00000450169 hDV102S1A0JD36 115 aa7.22□□□□□ -1.25
LSM5-208ENST00000450169 OTOL1A6NHN0 477 aaPredicted RBP7.22□□□□□ -1.25
LSM5-208ENST00000450169 C9JCJ5 164 aa7.22□□□□□ -1.25
LSM5-208ENST00000450169 FAM90A26D6RGX4 464 aa7.22□□□□□ -1.25
LSM5-208ENST00000450169 K7ESF4 209 aa7.22□□□□□ -1.25
LSM5-208ENST00000450169 CRYBB3P26998 211 aa7.22□□□□□ -1.25
LSM5-208ENST00000450169 RAB9AP51151 201 aa7.22□□□□□ -1.25
LSM5-208ENST00000450169 RPL31P62899 125 aaKnown RBP7.22□□□□□ -1.25
LSM5-208ENST00000450169 DAZAP2Q15038 168 aaPredicted RBP7.22□□□□□ -1.25
LSM5-208ENST00000450169 GABRA6Q16445 453 aa7.22□□□□□ -1.25
LSM5-208ENST00000450169 RSPO1Q2MKA7 263 aaPredicted RBP7.22□□□□□ -1.25
LSM5-208ENST00000450169 GCSAMLQ5JQS6 135 aa7.22□□□□□ -1.25
LSM5-208ENST00000450169 MRPL54Q6P161 138 aaKnown RBP7.22□□□□□ -1.25
LSM5-208ENST00000450169 ZNF841Q6ZN19 808 aa7.22□□□□□ -1.25
LSM5-208ENST00000450169 AP1S3Q96PC3 154 aa7.22□□□□□ -1.25
LSM5-208ENST00000450169 SIGMAR1Q99720 223 aa7.22□□□□□ -1.25
LSM5-208ENST00000450169 LY96Q9Y6Y9 160 aa7.22□□□□□ -1.25
LSM5-208ENST00000450169 A0A087X0K7 114 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms