RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 PAX2Q02962 417 aa8.12□□□□□ -1.11
CCDC171-203ENST00000449575 ELOBQ15370 118 aa8.12□□□□□ -1.11
CCDC171-203ENST00000449575 TAF9Q16594 264 aa8.12□□□□□ -1.11
CCDC171-203ENST00000449575 Q8IYB0 196 aa8.12□□□□□ -1.11
CCDC171-203ENST00000449575 OSR2Q8N2R0 312 aa8.12□□□□□ -1.11
CCDC171-203ENST00000449575 TPRX1Q8N7U7 411 aa8.12□□□□□ -1.11
CCDC171-203ENST00000449575 NICN1Q9BSH3 213 aa8.12□□□□□ -1.11
CCDC171-203ENST00000449575 ACTR3CQ9C0K3 210 aaPredicted RBP8.12□□□□□ -1.11
CCDC171-203ENST00000449575 IL36GQ9NZH8 169 aa8.12□□□□□ -1.11
CCDC171-203ENST00000449575 FBXL17Q9UF56 701 aa8.12□□□□□ -1.11
CCDC171-203ENST00000449575 PITPNC1Q9UKF7 332 aa8.12□□□□□ -1.11
CCDC171-203ENST00000449575 GPR132Q9UNW8 380 aa8.12□□□□□ -1.11
CCDC171-203ENST00000449575 PUS1Q9Y606 427 aaKnown RBP eCLIP8.12□□□□□ -1.11
CCDC171-203ENST00000449575 CRTAPO75718 401 aaPredicted RBP8.12□□□□□ -1.11
CCDC171-203ENST00000449575 MSMBP08118 114 aa8.12□□□□□ -1.11
CCDC171-203ENST00000449575 FPR2P25090 351 aa8.12□□□□□ -1.11
CCDC171-203ENST00000449575 RBM11P57052 281 aaKnown RBP8.12□□□□□ -1.11
CCDC171-203ENST00000449575 IL15RAQ13261 267 aa8.12□□□□□ -1.11
CCDC171-203ENST00000449575 LINC01356Q8N9X3 169 aa8.12□□□□□ -1.11
CCDC171-203ENST00000449575 OR51T1Q8NGJ9 327 aa8.12□□□□□ -1.11
CCDC171-203ENST00000449575 ZMAT3Q9HA38 289 aaKnown RBP8.12□□□□□ -1.11
CCDC171-203ENST00000449575 HIF1ANQ9NWT6 349 aa8.12□□□□□ -1.11
CCDC171-203ENST00000449575 SLC25A10Q9UBX3 287 aaPredicted RBP8.12□□□□□ -1.11
CCDC171-203ENST00000449575 MMP24Q9Y5R2 645 aa8.12□□□□□ -1.11
CCDC171-203ENST00000449575 NAV3Q8IVL0 2385 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 A0A0A6YYD4 124 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 TRAV24A0A0B4J272 114 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 B4DSR2 109 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 PHOX2AO14813 284 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 MPIG6BO95866 241 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 AVPP01185 164 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 PRH1P02810 166 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 OR13C7P0DN81 318 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 DLX1P56177 255 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 UBE2KP61086 200 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 PRB3Q04118 309 aaPredicted RBP8.11□□□□□ -1.11
CCDC171-203ENST00000449575 VAX1Q5SQQ9 334 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 CYB5R2Q6BCY4 276 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 CHST4Q8NCG5 386 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 OR4K15Q8NH41 348 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 SLC25A31Q9H0C2 315 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 PLA2G2EQ9NZK7 142 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 NKX6-3A6NJ46 265 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 SLC33A1O00400 549 aaPredicted RBP8.11□□□□□ -1.11
CCDC171-203ENST00000449575 NDUFB3O43676 98 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 GCGP01275 180 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 TK1P04183 234 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 GABRR1P24046 479 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 OR3A1P47881 315 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 ERVFRD-1P60508 538 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 SLC9A3R2Q15599 337 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 SPIN3Q5JUX0 258 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 C1orf229Q6ZS94 237 aaPredicted RBP8.11□□□□□ -1.11
CCDC171-203ENST00000449575 IL17RELQ6ZVW7 336 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 Q8WTZ3 238 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 H1FXQ92522 213 aaKnown RBP8.11□□□□□ -1.11
CCDC171-203ENST00000449575 OR10C1Q96KK4 312 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 DCTN5Q9BTE1 182 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 GSKIPQ9P0R6 139 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 FBXO7Q9Y3I1 522 aa8.11□□□□□ -1.11
CCDC171-203ENST00000449575 TMEM14DPA8MWL7 114 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 B4DEV8 164 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 K7N7A8 449 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 M0QZK8 103 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 M0R143 59 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 CYB5BO43169 146 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 CD5LO43866 347 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 GGCTO75223 188 aaKnown RBP8.1□□□□□ -1.11
CCDC171-203ENST00000449575 DFFBO76075 338 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 OR7C1O76099 320 aaPredicted RBP8.1□□□□□ -1.11
CCDC171-203ENST00000449575 METTL15P1P0C7V9 234 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 LINC00614P0C842 121 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 GAGE1Q13065 139 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 TMEM186Q96B77 213 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 Q96M66 194 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 GINS3Q9BRX5 216 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 NF1P21359 2839 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 H3BQ15 152 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 SH2D1BO14796 132 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 DEGS1O15121 323 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 TRGC2P03986 189 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 CHRM2P08172 466 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 OR5AC1P0C628 307 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 TRGC1P0CF51 173 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 EDDM3AQ14507 147 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 LRRC10Q5BKY1 277 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 PDZD11Q5EBL8 140 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 MRPL52Q86TS9 123 aaKnown RBP8.1□□□□□ -1.11
CCDC171-203ENST00000449575 GVQW1Q8N7I0 195 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 DYRK2Q92630 601 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 TVP23CQ96ET8 276 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 RCC1LQ96I51 464 aaKnown RBP8.1□□□□□ -1.11
CCDC171-203ENST00000449575 HIST1H2BLQ99880 126 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 LPAR5Q9H1C0 372 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 C5orf66Q9H5L9 145 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 YAE1D1Q9NRH1 226 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 GOLT1BQ9Y3E0 138 aa8.1□□□□□ -1.11
CCDC171-203ENST00000449575 LOC105371242A0A075B767 164 aa8.09□□□□□ -1.11
CCDC171-203ENST00000449575 FOXH1O75593 365 aa8.09□□□□□ -1.11
CCDC171-203ENST00000449575 DEDDO75618 318 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms