RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 UMAD1C9J7I0 102 aa8.66□□□□□ -1.02
VIPAS39-203ENST00000448935 TEX46H3BTG2 121 aa8.66□□□□□ -1.02
VIPAS39-203ENST00000448935 TRIM77I1YAP6 450 aa8.66□□□□□ -1.02
VIPAS39-203ENST00000448935 MMP23AO75900 390 aa8.66□□□□□ -1.02
VIPAS39-203ENST00000448935 APOA2P02652 100 aa8.66□□□□□ -1.02
VIPAS39-203ENST00000448935 IAPPP10997 89 aa8.66□□□□□ -1.02
VIPAS39-203ENST00000448935 IL3RAP26951 378 aa8.66□□□□□ -1.02
VIPAS39-203ENST00000448935 RPP30P78346 268 aaKnown RBP8.66□□□□□ -1.02
VIPAS39-203ENST00000448935 CLINT1Q14677 625 aa8.66□□□□□ -1.02
VIPAS39-203ENST00000448935 IL34Q6ZMJ4 242 aa8.66□□□□□ -1.02
VIPAS39-203ENST00000448935 ZNF833PQ6ZTB9 187 aa8.66□□□□□ -1.02
VIPAS39-203ENST00000448935 ZNF596Q8TC21 504 aa8.66□□□□□ -1.02
VIPAS39-203ENST00000448935 DTD1Q8TEA8 209 aa8.66□□□□□ -1.02
VIPAS39-203ENST00000448935 MARC2Q969Z3 335 aa8.66□□□□□ -1.02
VIPAS39-203ENST00000448935 BSCL2Q96G97 398 aaPredicted RBP8.66□□□□□ -1.02
VIPAS39-203ENST00000448935 CHODLQ9H9P2 273 aa8.66□□□□□ -1.02
VIPAS39-203ENST00000448935 PARP11Q9NR21 331 aa8.66□□□□□ -1.02
VIPAS39-203ENST00000448935 ANKHD1Q8IWZ3 2542 aaKnown RBP8.66□□□□□ -1.02
VIPAS39-203ENST00000448935 USF3Q68DE3 2245 aa8.66□□□□□ -1.02
VIPAS39-203ENST00000448935 COL6A6A6NMZ7 2263 aa8.66□□□□□ -1.02
VIPAS39-203ENST00000448935 CEBPZOSA8MTT3 80 aa8.65□□□□□ -1.02
VIPAS39-203ENST00000448935 A8MXK9 166 aa8.65□□□□□ -1.02
VIPAS39-203ENST00000448935 FCN3O75636 299 aa8.65□□□□□ -1.02
VIPAS39-203ENST00000448935 SOD3P08294 240 aa8.65□□□□□ -1.02
VIPAS39-203ENST00000448935 F2RL1P55085 397 aa8.65□□□□□ -1.02
VIPAS39-203ENST00000448935 DLX6P56179 175 aa8.65□□□□□ -1.02
VIPAS39-203ENST00000448935 SPCS3P61009 180 aa8.65□□□□□ -1.02
VIPAS39-203ENST00000448935 POU2AF1Q16633 256 aa8.65□□□□□ -1.02
VIPAS39-203ENST00000448935 ATP6V1FQ16864 119 aa8.65□□□□□ -1.02
VIPAS39-203ENST00000448935 SPANXN5Q5MJ07 72 aa8.65□□□□□ -1.02
VIPAS39-203ENST00000448935 SLC25A24Q6NUK1 477 aa8.65□□□□□ -1.02
VIPAS39-203ENST00000448935 ZNF429Q86V71 674 aa8.65□□□□□ -1.02
VIPAS39-203ENST00000448935 TMEM217Q8N7C4 229 aa8.65□□□□□ -1.02
VIPAS39-203ENST00000448935 OR10X1Q8NGY0 326 aa8.65□□□□□ -1.02
VIPAS39-203ENST00000448935 OR9G1Q8NH87 305 aa8.65□□□□□ -1.02
VIPAS39-203ENST00000448935 C8orf46Q8TAG6 207 aa8.65□□□□□ -1.02
VIPAS39-203ENST00000448935 MMP26Q9NRE1 261 aa8.65□□□□□ -1.02
VIPAS39-203ENST00000448935 SLC35D1Q9NTN3 355 aa8.65□□□□□ -1.02
VIPAS39-203ENST00000448935 FLNBO75369 2602 aaKnown RBP8.65□□□□□ -1.03
VIPAS39-203ENST00000448935 LYNX1G3V0Z9 82 aa8.65□□□□□ -1.03
VIPAS39-203ENST00000448935 H3BP45 60 aa8.65□□□□□ -1.03
VIPAS39-203ENST00000448935 J3QR06 171 aa8.65□□□□□ -1.03
VIPAS39-203ENST00000448935 CRYZL1O95825 349 aa8.65□□□□□ -1.03
VIPAS39-203ENST00000448935 IFNA17P01571 189 aa8.65□□□□□ -1.03
VIPAS39-203ENST00000448935 IGHV1-8P0DP01 117 aa8.65□□□□□ -1.03
VIPAS39-203ENST00000448935 LYNX1P0DP58 116 aa8.65□□□□□ -1.03
VIPAS39-203ENST00000448935 IGFBP2P18065 325 aa8.65□□□□□ -1.03
VIPAS39-203ENST00000448935 ZP3P21754 424 aa8.65□□□□□ -1.03
VIPAS39-203ENST00000448935 PDLIM3Q53GG5 364 aaPredicted RBP8.65□□□□□ -1.03
VIPAS39-203ENST00000448935 TMEM14EPQ6UXP3 125 aa8.65□□□□□ -1.03
VIPAS39-203ENST00000448935 ZNF383Q8NA42 475 aa8.65□□□□□ -1.03
VIPAS39-203ENST00000448935 HSD17B11Q8NBQ5 300 aa8.65□□□□□ -1.03
VIPAS39-203ENST00000448935 OSR1Q8TAX0 266 aaPredicted RBP8.65□□□□□ -1.03
VIPAS39-203ENST00000448935 SCGB1C1Q8TD33 95 aa8.65□□□□□ -1.03
VIPAS39-203ENST00000448935 PARD6GQ9BYG4 376 aaPredicted RBP8.65□□□□□ -1.03
VIPAS39-203ENST00000448935 TMEM140Q9NV12 185 aa8.65□□□□□ -1.03
VIPAS39-203ENST00000448935 PKDREJQ9NTG1 2253 aa8.64□□□□□ -1.03
VIPAS39-203ENST00000448935 ROS1P08922 2347 aa8.64□□□□□ -1.03
VIPAS39-203ENST00000448935 PPIHO43447 177 aaKnown RBP8.64□□□□□ -1.03
VIPAS39-203ENST00000448935 OR8U8P0C7N1 319 aa8.64□□□□□ -1.03
VIPAS39-203ENST00000448935 OR9G9P0C7N8 305 aa8.64□□□□□ -1.03
VIPAS39-203ENST00000448935 METTL15P1P0C7V9 234 aa8.64□□□□□ -1.03
VIPAS39-203ENST00000448935 ATP6V0CP27449 155 aa8.64□□□□□ -1.03
VIPAS39-203ENST00000448935 ZNF137PP52743 207 aa8.64□□□□□ -1.03
VIPAS39-203ENST00000448935 PRRX1P54821 245 aa8.64□□□□□ -1.03
VIPAS39-203ENST00000448935 LINC00205P59089 165 aa8.64□□□□□ -1.03
VIPAS39-203ENST00000448935 TMEM267Q0VDI3 215 aaPredicted RBP8.64□□□□□ -1.03
VIPAS39-203ENST00000448935 PXDC1Q5TGL8 231 aa8.64□□□□□ -1.03
VIPAS39-203ENST00000448935 ZNF841Q6ZN19 808 aa8.64□□□□□ -1.03
VIPAS39-203ENST00000448935 CCDC28AQ8IWP9 274 aa8.64□□□□□ -1.03
VIPAS39-203ENST00000448935 COMMD1Q8N668 190 aa8.64□□□□□ -1.03
VIPAS39-203ENST00000448935 OR2G3Q8NGZ4 309 aa8.64□□□□□ -1.03
VIPAS39-203ENST00000448935 PINX1Q96BK5 328 aaKnown RBP8.64□□□□□ -1.03
VIPAS39-203ENST00000448935 PSMG3-AS1Q96PY0 264 aa8.64□□□□□ -1.03
VIPAS39-203ENST00000448935 PCGF1Q9BSM1 259 aa8.64□□□□□ -1.03
VIPAS39-203ENST00000448935 TMEM133Q9H2Q1 129 aa8.64□□□□□ -1.03
VIPAS39-203ENST00000448935 HIPK2Q9H2X6 1198 aa8.64□□□□□ -1.03
VIPAS39-203ENST00000448935 NUP50Q9UKX7 468 aa8.64□□□□□ -1.03
VIPAS39-203ENST00000448935 SETXQ7Z333 2677 aaKnown RBP8.64□□□□□ -1.03
VIPAS39-203ENST00000448935 PPIAL4CA0A0B4J2A2 164 aa8.63□□□□□ -1.03
VIPAS39-203ENST00000448935 A6NNC1 897 aa8.63□□□□□ -1.03
VIPAS39-203ENST00000448935 PRH1P02810 166 aa8.63□□□□□ -1.03
VIPAS39-203ENST00000448935 LIPFP07098 398 aa8.63□□□□□ -1.03
VIPAS39-203ENST00000448935 CT45A6P0DMU7 189 aa8.63□□□□□ -1.03
VIPAS39-203ENST00000448935 CT45A5P0DMU8 189 aa8.63□□□□□ -1.03
VIPAS39-203ENST00000448935 CT45A7P0DMV0 189 aa8.63□□□□□ -1.03
VIPAS39-203ENST00000448935 PPIAL4GP0DN37 164 aa8.63□□□□□ -1.03
VIPAS39-203ENST00000448935 CAMLGP49069 296 aa8.63□□□□□ -1.03
VIPAS39-203ENST00000448935 RAB13P51153 203 aa8.63□□□□□ -1.03
VIPAS39-203ENST00000448935 PJVKQ0ZLH3 352 aa8.63□□□□□ -1.03
VIPAS39-203ENST00000448935 UTF1Q5T230 341 aa8.63□□□□□ -1.03
VIPAS39-203ENST00000448935 AVPI1Q5T686 147 aa8.63□□□□□ -1.03
VIPAS39-203ENST00000448935 WDR25Q64LD2 544 aaPredicted RBP8.63□□□□□ -1.03
VIPAS39-203ENST00000448935 DPPA3Q6W0C5 159 aa8.63□□□□□ -1.03
VIPAS39-203ENST00000448935 Q6ZRG5 221 aa8.63□□□□□ -1.03
VIPAS39-203ENST00000448935 SSX9Q7RTT3 188 aa8.63□□□□□ -1.03
VIPAS39-203ENST00000448935 PDPNQ86YL7 162 aa8.63□□□□□ -1.03
VIPAS39-203ENST00000448935 ABHD12Q8N2K0 398 aa8.63□□□□□ -1.03
VIPAS39-203ENST00000448935 OR10P1Q8NGE3 313 aa8.63□□□□□ -1.03
VIPAS39-203ENST00000448935 QTRT1Q9BXR0 403 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms