RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 LCN12Q6JVE5 192 aa21.48■■□□□ 1.03
CBX4-202ENST00000448310 GTSCR1Q86UQ5 136 aa21.48■■□□□ 1.03
CBX4-202ENST00000448310 SPATA25Q9BR10 227 aa21.48■■□□□ 1.03
CBX4-202ENST00000448310 DCUN1D5Q9BTE7 237 aa21.48■■□□□ 1.03
CBX4-202ENST00000448310 ST6GALNAC5Q9BVH7 336 aa21.48■■□□□ 1.03
CBX4-202ENST00000448310 BMPR1BO00238 502 aa21.47■■□□□ 1.03
CBX4-202ENST00000448310 NFYAP23511 347 aaPredicted RBP21.47■■□□□ 1.03
CBX4-202ENST00000448310 DTYMKP23919 212 aa21.47■■□□□ 1.03
CBX4-202ENST00000448310 CDK10Q15131 360 aa21.47■■□□□ 1.03
CBX4-202ENST00000448310 CDNFQ49AH0 187 aa21.47■■□□□ 1.03
CBX4-202ENST00000448310 Q8N402 240 aa21.47■■□□□ 1.03
CBX4-202ENST00000448310 ZNF645Q8N7E2 425 aa21.47■■□□□ 1.03
CBX4-202ENST00000448310 SIGLEC8Q9NYZ4 499 aa21.47■■□□□ 1.03
CBX4-202ENST00000448310 BLOC1S6Q9UL45 172 aa21.47■■□□□ 1.03
CBX4-202ENST00000448310 RPL30P62888 115 aaKnown RBP21.46■■□□□ 1.03
CBX4-202ENST00000448310 ATP5G2Q06055 141 aa21.46■■□□□ 1.03
CBX4-202ENST00000448310 KCTD9Q7L273 389 aa21.46■■□□□ 1.03
CBX4-202ENST00000448310 CENPOQ9BU64 300 aa21.46■■□□□ 1.03
CBX4-202ENST00000448310 TUBA4BQ9H853 241 aa21.46■■□□□ 1.03
CBX4-202ENST00000448310 DNAH1Q9P2D7 4330 aa21.46■■□□□ 1.03
CBX4-202ENST00000448310 TRBV9A0A0B4J1U6 114 aa21.45■■□□□ 1.02
CBX4-202ENST00000448310 LCE6AA0A183 80 aa21.45■■□□□ 1.02
CBX4-202ENST00000448310 FAM223BA6NKX1 122 aa21.45■■□□□ 1.02
CBX4-202ENST00000448310 TUSC2O75896 110 aa21.45■■□□□ 1.02
CBX4-202ENST00000448310 ACTL6BO94805 426 aa21.45■■□□□ 1.02
CBX4-202ENST00000448310 FAM223AQ8IWN6 122 aa21.45■■□□□ 1.02
CBX4-202ENST00000448310 VKORC1L1Q8N0U8 176 aa21.45■■□□□ 1.02
CBX4-202ENST00000448310 NUDCD2Q8WVJ2 157 aa21.45■■□□□ 1.02
CBX4-202ENST00000448310 VCX3BQ9H321 246 aa21.45■■□□□ 1.02
CBX4-202ENST00000448310 PEMTQ9UBM1 199 aa21.45■■□□□ 1.02
CBX4-202ENST00000448310 OR2W1Q9Y3N9 320 aa21.45■■□□□ 1.02
CBX4-202ENST00000448310 ERICH4A6NGS2 130 aa21.44■■□□□ 1.02
CBX4-202ENST00000448310 MECP2P51608 486 aaKnown RBP21.44■■□□□ 1.02
CBX4-202ENST00000448310 ARL6IP1Q15041 203 aa21.44■■□□□ 1.02
CBX4-202ENST00000448310 ADAMTSL5Q6ZMM2 481 aa21.44■■□□□ 1.02
CBX4-202ENST00000448310 MMD2Q8IY49 270 aa21.44■■□□□ 1.02
CBX4-202ENST00000448310 SPIN2AQ99865 258 aa21.44■■□□□ 1.02
CBX4-202ENST00000448310 SPIN2BQ9BPZ2 258 aa21.44■■□□□ 1.02
CBX4-202ENST00000448310 RBMX2Q9Y388 322 aaKnown RBP21.44■■□□□ 1.02
CBX4-202ENST00000448310 IGKV1D-13A0A0B4J2D9 117 aa21.43■■□□□ 1.02
CBX4-202ENST00000448310 HMX3A6NHT5 357 aa21.43■■□□□ 1.02
CBX4-202ENST00000448310 OR2J3O76001 311 aa21.43■■□□□ 1.02
CBX4-202ENST00000448310 IGLV2-14P01704 120 aa21.43■■□□□ 1.02
CBX4-202ENST00000448310 HLA-DQB1P01920 261 aa21.43■■□□□ 1.02
CBX4-202ENST00000448310 IGKV1-13P0DP09 117 aa21.43■■□□□ 1.02
CBX4-202ENST00000448310 HACD4Q5VWC8 232 aa21.43■■□□□ 1.02
CBX4-202ENST00000448310 C19orf35Q6ZS72 473 aa21.43■■□□□ 1.02
CBX4-202ENST00000448310 TTC9CQ8N5M4 171 aa21.43■■□□□ 1.02
CBX4-202ENST00000448310 PRELID3BQ9Y3B1 194 aa21.43■■□□□ 1.02
CBX4-202ENST00000448310 TMEM235A6NFC5 223 aa21.42■■□□□ 1.02
CBX4-202ENST00000448310 CREBL2O60519 120 aaPredicted RBP21.42■■□□□ 1.02
CBX4-202ENST00000448310 HSPA13P48723 471 aa21.42■■□□□ 1.02
CBX4-202ENST00000448310 PLEKHA3Q9HB20 300 aa21.42■■□□□ 1.02
CBX4-202ENST00000448310 RETNQ9HD89 108 aa21.42■■□□□ 1.02
CBX4-202ENST00000448310 MRPS7Q9Y2R9 242 aaKnown RBP21.42■■□□□ 1.02
CBX4-202ENST00000448310 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP21.41■■□□□ 1.02
CBX4-202ENST00000448310 PPP5D1E7EU14 171 aa21.41■■□□□ 1.02
CBX4-202ENST00000448310 CD36P16671 472 aa21.41■■□□□ 1.02
CBX4-202ENST00000448310 EDN2P20800 178 aa21.41■■□□□ 1.02
CBX4-202ENST00000448310 GALP22466 123 aa21.41■■□□□ 1.02
CBX4-202ENST00000448310 CD300EQ496F6 205 aaPredicted RBP21.41■■□□□ 1.02
CBX4-202ENST00000448310 TXNL4BQ9NX01 149 aaKnown RBP21.41■■□□□ 1.02
CBX4-202ENST00000448310 NOTOA8MTQ0 251 aa21.4■■□□□ 1.02
CBX4-202ENST00000448310 CTXN2P0C2S0 81 aa21.4■■□□□ 1.02
CBX4-202ENST00000448310 CD81P60033 236 aa21.4■■□□□ 1.02
CBX4-202ENST00000448310 C15orf32Q32M92 178 aa21.4■■□□□ 1.02
CBX4-202ENST00000448310 NECAP1Q8NC96 275 aa21.4■■□□□ 1.02
CBX4-202ENST00000448310 OR51E2Q9H255 320 aa21.4■■□□□ 1.02
CBX4-202ENST00000448310 DCSTAMPQ9H295 470 aa21.4■■□□□ 1.02
CBX4-202ENST00000448310 SPATA2Q9UM82 520 aa21.4■■□□□ 1.02
CBX4-202ENST00000448310 TEX22C9J3V5 150 aa21.39■■□□□ 1.01
CBX4-202ENST00000448310 AIREO43918 545 aa21.39■■□□□ 1.01
CBX4-202ENST00000448310 SSX5O60225 188 aa21.39■■□□□ 1.01
CBX4-202ENST00000448310 HLA-AP01891 365 aaKnown RBP21.39■■□□□ 1.01
CBX4-202ENST00000448310 CNIH2Q6PI25 160 aa21.39■■□□□ 1.01
CBX4-202ENST00000448310 OR2K2Q8NGT1 345 aa21.39■■□□□ 1.01
CBX4-202ENST00000448310 TCTEX1D2Q8WW35 142 aa21.39■■□□□ 1.01
CBX4-202ENST00000448310 GPHA2Q96T91 129 aa21.39■■□□□ 1.01
CBX4-202ENST00000448310 DAPK2Q9UIK4 370 aa21.39■■□□□ 1.01
CBX4-202ENST00000448310 EPPK1P58107 5090 aaKnown RBP21.39■■□□□ 1.01
CBX4-202ENST00000448310 E7EUB6 86 aa21.38■■□□□ 1.01
CBX4-202ENST00000448310 IFNA6P05013 189 aa21.38■■□□□ 1.01
CBX4-202ENST00000448310 PSMB9P28065 219 aa21.38■■□□□ 1.01
CBX4-202ENST00000448310 GNG2P59768 71 aa21.38■■□□□ 1.01
CBX4-202ENST00000448310 DYNLRB2Q8TF09 96 aa21.38■■□□□ 1.01
CBX4-202ENST00000448310 FYTTD1Q96QD9 318 aaKnown RBP21.38■■□□□ 1.01
CBX4-202ENST00000448310 NEURL2Q9BR09 285 aa21.38■■□□□ 1.01
CBX4-202ENST00000448310 DMRT1Q9Y5R6 373 aa21.38■■□□□ 1.01
CBX4-202ENST00000448310 ZNF785A8K8V0 405 aa21.37■■□□□ 1.01
CBX4-202ENST00000448310 SLC22A5O76082 557 aa21.37■■□□□ 1.01
CBX4-202ENST00000448310 KBTBD11O94819 623 aa21.37■■□□□ 1.01
CBX4-202ENST00000448310 IGHV3-23P01764 117 aa21.37■■□□□ 1.01
CBX4-202ENST00000448310 IL6RP08887 468 aaPredicted RBP21.37■■□□□ 1.01
CBX4-202ENST00000448310 CD7P09564 240 aa21.37■■□□□ 1.01
CBX4-202ENST00000448310 BRWD1-AS2P59051 145 aa21.37■■□□□ 1.01
CBX4-202ENST00000448310 GABARAPL2P60520 117 aa21.37■■□□□ 1.01
CBX4-202ENST00000448310 EIF4EBP1Q13541 118 aaPredicted RBP21.37■■□□□ 1.01
CBX4-202ENST00000448310 UBE2UQ5VVX9 321 aa21.37■■□□□ 1.01
CBX4-202ENST00000448310 SLC25A42Q86VD7 318 aa21.37■■□□□ 1.01
CBX4-202ENST00000448310 OR4S2Q8NH73 311 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms