RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 FSCN3Q9NQT6 498 aa15.96■□□□□ 0.15
SHANK3-203ENST00000445220 F8VVB4 439 aa15.96■□□□□ 0.14
SHANK3-203ENST00000445220 F8VWA3 439 aa15.96■□□□□ 0.14
SHANK3-203ENST00000445220 MAGEA5P43359 124 aa15.96■□□□□ 0.14
SHANK3-203ENST00000445220 PMS2CLQ68D20 193 aa15.96■□□□□ 0.14
SHANK3-203ENST00000445220 LHFPL6Q9Y693 200 aa15.96■□□□□ 0.14
SHANK3-203ENST00000445220 K7N7A8 449 aa15.95■□□□□ 0.14
SHANK3-203ENST00000445220 CA1P00915 261 aaPredicted RBP15.95■□□□□ 0.14
SHANK3-203ENST00000445220 RPL27AP46776 148 aaKnown RBP15.95■□□□□ 0.14
SHANK3-203ENST00000445220 FOXA3P55318 350 aaPredicted RBP15.95■□□□□ 0.14
SHANK3-203ENST00000445220 KCNMB1Q16558 191 aa15.95■□□□□ 0.14
SHANK3-203ENST00000445220 BHLHA15Q7RTS1 189 aaPredicted RBP15.95■□□□□ 0.14
SHANK3-203ENST00000445220 MARCH11A6NNE9 402 aa15.95■□□□□ 0.14
SHANK3-203ENST00000445220 TBX6O95947 436 aaPredicted RBP15.95■□□□□ 0.14
SHANK3-203ENST00000445220 APELAP0DMC3 54 aa15.95■□□□□ 0.14
SHANK3-203ENST00000445220 HEPN1Q6WQI6 88 aa15.95■□□□□ 0.14
SHANK3-203ENST00000445220 C5orf30Q96GV9 206 aa15.95■□□□□ 0.14
SHANK3-203ENST00000445220 HIST1H2BLQ99880 126 aa15.95■□□□□ 0.14
SHANK3-203ENST00000445220 PPIHO43447 177 aaKnown RBP15.95■□□□□ 0.14
SHANK3-203ENST00000445220 NUTF2P61970 127 aaKnown RBP15.95■□□□□ 0.14
SHANK3-203ENST00000445220 TMEM78Q5T7P6 136 aa15.95■□□□□ 0.14
SHANK3-203ENST00000445220 NRN1Q9NPD7 142 aa15.95■□□□□ 0.14
SHANK3-203ENST00000445220 MRPL16Q9NX20 251 aaKnown RBP15.95■□□□□ 0.14
SHANK3-203ENST00000445220 COLCA2A8K830 154 aa15.95■□□□□ 0.14
SHANK3-203ENST00000445220 LDLRAD4O15165 306 aa15.95■□□□□ 0.14
SHANK3-203ENST00000445220 SERF1AO75920 110 aa15.95■□□□□ 0.14
SHANK3-203ENST00000445220 RIPPLY2Q5TAB7 128 aa15.95■□□□□ 0.14
SHANK3-203ENST00000445220 NABP2Q9BQ15 211 aa15.95■□□□□ 0.14
SHANK3-203ENST00000445220 MIA3Q5JRA6 1907 aa15.94■□□□□ 0.14
SHANK3-203ENST00000445220 INO80CQ6PI98 192 aaPredicted RBP15.94■□□□□ 0.14
SHANK3-203ENST00000445220 TNFRSF19Q9NS68 423 aa15.94■□□□□ 0.14
SHANK3-203ENST00000445220 IZUMO4Q1ZYL8 232 aa15.94■□□□□ 0.14
SHANK3-203ENST00000445220 ZNF658BQ4V348 819 aaPredicted RBP15.94■□□□□ 0.14
SHANK3-203ENST00000445220 LDLRAD2Q5SZI1 272 aa15.94■□□□□ 0.14
SHANK3-203ENST00000445220 ZDBF2Q9HCK1 2354 aa15.94■□□□□ 0.14
SHANK3-203ENST00000445220 PRR33A8MZF0 331 aa15.94■□□□□ 0.14
SHANK3-203ENST00000445220 SLC17A3O00476 420 aa15.94■□□□□ 0.14
SHANK3-203ENST00000445220 KLF4O43474 513 aa15.94■□□□□ 0.14
SHANK3-203ENST00000445220 TSPAN2O60636 221 aa15.94■□□□□ 0.14
SHANK3-203ENST00000445220 DCAF10Q5QP82 559 aa15.94■□□□□ 0.14
SHANK3-203ENST00000445220 ASCL5Q7RTU5 278 aa15.94■□□□□ 0.14
SHANK3-203ENST00000445220 APOBEC4Q8WW27 367 aaKnown RBP15.94■□□□□ 0.14
SHANK3-203ENST00000445220 DLL3Q9NYJ7 618 aa15.94■□□□□ 0.14
SHANK3-203ENST00000445220 SEC16AO15027 2179 aa15.94■□□□□ 0.14
SHANK3-203ENST00000445220 MEF2CQ06413 473 aaPredicted RBP15.94■□□□□ 0.14
SHANK3-203ENST00000445220 SAXO1Q8IYX7 474 aa15.94■□□□□ 0.14
SHANK3-203ENST00000445220 TPRX1Q8N7U7 411 aa15.94■□□□□ 0.14
SHANK3-203ENST00000445220 OR51G1Q8NGK1 321 aa15.94■□□□□ 0.14
SHANK3-203ENST00000445220 WNT5BQ9H1J7 359 aa15.94■□□□□ 0.14
SHANK3-203ENST00000445220 MEGF9Q9H1U4 602 aa15.94■□□□□ 0.14
SHANK3-203ENST00000445220 RPL8P62917 257 aaKnown RBP15.93■□□□□ 0.14
SHANK3-203ENST00000445220 P2RY6Q15077 328 aa15.93■□□□□ 0.14
SHANK3-203ENST00000445220 GCSAMQ8N6F7 178 aa15.93■□□□□ 0.14
SHANK3-203ENST00000445220 TMUB1Q9BVT8 246 aa15.93■□□□□ 0.14
SHANK3-203ENST00000445220 TDRD15B5MCY1 1934 aaKnown RBP15.93■□□□□ 0.14
SHANK3-203ENST00000445220 APC2O95996 2303 aa15.93■□□□□ 0.14
SHANK3-203ENST00000445220 GDF9O60383 454 aa15.93■□□□□ 0.14
SHANK3-203ENST00000445220 SLC22A18ASQ8N1D0 253 aa15.93■□□□□ 0.14
SHANK3-203ENST00000445220 STPG3Q8N7X2 389 aa15.93■□□□□ 0.14
SHANK3-203ENST00000445220 ZDHHC16Q969W1 377 aa15.93■□□□□ 0.14
SHANK3-203ENST00000445220 RND2P52198 227 aa15.93■□□□□ 0.14
SHANK3-203ENST00000445220 RPL23P62829 140 aaKnown RBP15.93■□□□□ 0.14
SHANK3-203ENST00000445220 SMAGPQ0VAQ4 97 aa15.93■□□□□ 0.14
SHANK3-203ENST00000445220 HIST3H2BBQ8N257 126 aa15.93■□□□□ 0.14
SHANK3-203ENST00000445220 ZNF714Q96N38 554 aa15.93■□□□□ 0.14
SHANK3-203ENST00000445220 ASXL3Q9C0F0 2248 aa15.93■□□□□ 0.14
SHANK3-203ENST00000445220 H3BUT2 72 aa15.93■□□□□ 0.14
SHANK3-203ENST00000445220 DLEU1O43261 78 aa15.93■□□□□ 0.14
SHANK3-203ENST00000445220 HIST1H1AQ02539 215 aaPredicted RBP15.93■□□□□ 0.14
SHANK3-203ENST00000445220 STPG1Q5TH74 334 aa15.93■□□□□ 0.14
SHANK3-203ENST00000445220 GATAD1Q8WUU5 269 aa15.93■□□□□ 0.14
SHANK3-203ENST00000445220 RNF126Q9BV68 326 aa15.93■□□□□ 0.14
SHANK3-203ENST00000445220 RTN4RQ9BZR6 473 aa15.93■□□□□ 0.14
SHANK3-203ENST00000445220 CHRNA10Q9GZZ6 450 aa15.93■□□□□ 0.14
SHANK3-203ENST00000445220 COL11A1P12107 1806 aaPredicted RBP15.93■□□□□ 0.14
SHANK3-203ENST00000445220 SNAI2O43623 268 aa15.92■□□□□ 0.14
SHANK3-203ENST00000445220 NPCDR1Q9BY65 106 aa15.92■□□□□ 0.14
SHANK3-203ENST00000445220 HEXA-AS1Q9H8Q6 139 aa15.92■□□□□ 0.14
SHANK3-203ENST00000445220 TRAV8-6A0A0B4J262 113 aa15.92■□□□□ 0.14
SHANK3-203ENST00000445220 KLRB1Q12918 225 aa15.92■□□□□ 0.14
SHANK3-203ENST00000445220 MDP1Q86V88 176 aa15.92■□□□□ 0.14
SHANK3-203ENST00000445220 RAB1CQ92928 201 aa15.92■□□□□ 0.14
SHANK3-203ENST00000445220 PKIBQ9C010 78 aa15.92■□□□□ 0.14
SHANK3-203ENST00000445220 TCF19Q9Y242 345 aa15.92■□□□□ 0.14
SHANK3-203ENST00000445220 LINC00614P0C842 121 aa15.92■□□□□ 0.14
SHANK3-203ENST00000445220 GPR183P32249 361 aa15.92■□□□□ 0.14
SHANK3-203ENST00000445220 ICAM4Q14773 271 aa15.92■□□□□ 0.14
SHANK3-203ENST00000445220 LY6G6FQ5SQ64 297 aa15.92■□□□□ 0.14
SHANK3-203ENST00000445220 SPRED2Q7Z698 418 aa15.92■□□□□ 0.14
SHANK3-203ENST00000445220 ZNF418Q8TF45 676 aaPredicted RBP15.92■□□□□ 0.14
SHANK3-203ENST00000445220 RTBDNQ9BSG5 229 aaPredicted RBP15.92■□□□□ 0.14
SHANK3-203ENST00000445220 RAXQ9Y2V3 346 aa15.92■□□□□ 0.14
SHANK3-203ENST00000445220 REG1BP48304 166 aa15.92■□□□□ 0.14
SHANK3-203ENST00000445220 MMDQ15546 238 aa15.92■□□□□ 0.14
SHANK3-203ENST00000445220 FBXW9Q5XUX1 488 aa15.92■□□□□ 0.14
SHANK3-203ENST00000445220 IGHV3OR15-7A0A075B7D8 119 aa15.91■□□□□ 0.14
SHANK3-203ENST00000445220 RELQ04864 619 aaPredicted RBP15.91■□□□□ 0.14
SHANK3-203ENST00000445220 FAM19A2Q8N3H0 131 aa15.91■□□□□ 0.14
SHANK3-203ENST00000445220 RP1P56715 2156 aa15.91■□□□□ 0.14
SHANK3-203ENST00000445220 ANOS1P23352 680 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms