RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 DHRS7BQ6IAN0 325 aaPredicted RBP13.72□□□□□ -0.21
LIME1-202ENST00000444951 PLET1Q6UQ28 207 aa13.72□□□□□ -0.21
LIME1-202ENST00000444951 SSX9Q7RTT3 188 aa13.72□□□□□ -0.21
LIME1-202ENST00000444951 VKORC1L1Q8N0U8 176 aa13.72□□□□□ -0.21
LIME1-202ENST00000444951 TMEM86BQ8N661 226 aa13.72□□□□□ -0.21
LIME1-202ENST00000444951 Q8N6K4 173 aa13.72□□□□□ -0.21
LIME1-202ENST00000444951 CASTOR1Q8WTX7 329 aa13.72□□□□□ -0.21
LIME1-202ENST00000444951 RBM14Q96PK6 669 aaKnown RBP13.72□□□□□ -0.21
LIME1-202ENST00000444951 KCNIP3Q9Y2W7 256 aa13.72□□□□□ -0.21
LIME1-202ENST00000444951 PRKDCP78527 4128 aaKnown RBP13.71□□□□□ -0.21
LIME1-202ENST00000444951 SH2D7A6NKC9 451 aaPredicted RBP13.71□□□□□ -0.21
LIME1-202ENST00000444951 NBR2O15453 112 aa13.71□□□□□ -0.21
LIME1-202ENST00000444951 OR2F2O95006 317 aa13.71□□□□□ -0.21
LIME1-202ENST00000444951 PTTG1O95997 202 aa13.71□□□□□ -0.21
LIME1-202ENST00000444951 RNASE1P07998 156 aaKnown RBP13.71□□□□□ -0.21
LIME1-202ENST00000444951 SUPT4H1P63272 117 aaKnown RBP13.71□□□□□ -0.21
LIME1-202ENST00000444951 PLGLAQ15195 96 aa13.71□□□□□ -0.21
LIME1-202ENST00000444951 ZNF585BQ52M93 769 aa13.71□□□□□ -0.21
LIME1-202ENST00000444951 TMEM177Q53S58 311 aa13.71□□□□□ -0.21
LIME1-202ENST00000444951 TMEM128Q5BJH2 165 aa13.71□□□□□ -0.21
LIME1-202ENST00000444951 PRR31Q5SQ13 230 aa13.71□□□□□ -0.21
LIME1-202ENST00000444951 C11orf88Q6PI97 169 aa13.71□□□□□ -0.21
LIME1-202ENST00000444951 DUSP18Q8NEJ0 188 aa13.71□□□□□ -0.21
LIME1-202ENST00000444951 CD300LFQ8TDQ1 290 aa13.71□□□□□ -0.21
LIME1-202ENST00000444951 TSNAXQ99598 290 aaKnown RBP13.71□□□□□ -0.21
LIME1-202ENST00000444951 KIAA1456Q9P272 454 aa13.71□□□□□ -0.21
LIME1-202ENST00000444951 MOB4Q9Y3A3 225 aa13.71□□□□□ -0.21
LIME1-202ENST00000444951 SRRM4A7MD48 611 aaKnown RBP13.7□□□□□ -0.22
LIME1-202ENST00000444951 RBFOX2O43251 390 aaKnown RBP eCLIP13.7□□□□□ -0.22
LIME1-202ENST00000444951 SLC25A17O43808 307 aa13.7□□□□□ -0.22
LIME1-202ENST00000444951 HPRT1P00492 218 aa13.7□□□□□ -0.22
LIME1-202ENST00000444951 HLA-AP01891 365 aaKnown RBP13.7□□□□□ -0.22
LIME1-202ENST00000444951 OR4E1P0C645 316 aa13.7□□□□□ -0.22
LIME1-202ENST00000444951 ANXA3P12429 323 aa13.7□□□□□ -0.22
LIME1-202ENST00000444951 PSG5Q15238 335 aa13.7□□□□□ -0.22
LIME1-202ENST00000444951 TCTEX1D1Q8N7M0 179 aa13.7□□□□□ -0.22
LIME1-202ENST00000444951 OSR1Q8TAX0 266 aaPredicted RBP13.7□□□□□ -0.22
LIME1-202ENST00000444951 R3HDM4Q96D70 268 aa13.7□□□□□ -0.22
LIME1-202ENST00000444951 CLCC1Q96S66 551 aa13.7□□□□□ -0.22
LIME1-202ENST00000444951 TMEM222Q9H0R3 208 aa13.7□□□□□ -0.22
LIME1-202ENST00000444951 FBXL15Q9H469 300 aa13.7□□□□□ -0.22
LIME1-202ENST00000444951 METTL1Q9UBP6 276 aaKnown RBP13.7□□□□□ -0.22
LIME1-202ENST00000444951 FAM181BA6NEQ2 426 aa13.69□□□□□ -0.22
LIME1-202ENST00000444951 INMT-MINDY4F8WBC2 141 aa13.69□□□□□ -0.22
LIME1-202ENST00000444951 SFT2D2O95562 160 aa13.69□□□□□ -0.22
LIME1-202ENST00000444951 HRASP01112 189 aa13.69□□□□□ -0.22
LIME1-202ENST00000444951 KRASP01116 189 aa13.69□□□□□ -0.22
LIME1-202ENST00000444951 G6PCP35575 357 aa13.69□□□□□ -0.22
LIME1-202ENST00000444951 LGALS7P47929 136 aa13.69□□□□□ -0.22
LIME1-202ENST00000444951 DHODHQ02127 395 aa13.69□□□□□ -0.22
LIME1-202ENST00000444951 C9orf152Q5JTZ5 239 aa13.69□□□□□ -0.22
LIME1-202ENST00000444951 SHISA2Q6UWI4 295 aa13.69□□□□□ -0.22
LIME1-202ENST00000444951 LIAT1Q6ZQX7 453 aa13.69□□□□□ -0.22
LIME1-202ENST00000444951 DMBX1Q8NFW5 382 aa13.69□□□□□ -0.22
LIME1-202ENST00000444951 OR52B4Q8NGK2 314 aa13.69□□□□□ -0.22
LIME1-202ENST00000444951 GLYATL2Q8WU03 294 aa13.69□□□□□ -0.22
LIME1-202ENST00000444951 RASL11BQ9BPW5 248 aa13.69□□□□□ -0.22
LIME1-202ENST00000444951 SEC22CQ9BRL7 303 aa13.69□□□□□ -0.22
LIME1-202ENST00000444951 PLEKHA2Q9HB19 425 aa13.69□□□□□ -0.22
LIME1-202ENST00000444951 PLSCR3Q9NRY6 295 aa13.69□□□□□ -0.22
LIME1-202ENST00000444951 C1RLQ9NZP8 487 aa13.69□□□□□ -0.22
LIME1-202ENST00000444951 C9orf170A2RU37 121 aa13.68□□□□□ -0.22
LIME1-202ENST00000444951 CLDN34H7C241 214 aa13.68□□□□□ -0.22
LIME1-202ENST00000444951 RRHO14718 337 aa13.68□□□□□ -0.22
LIME1-202ENST00000444951 IGKV1-39P01597 117 aa13.68□□□□□ -0.22
LIME1-202ENST00000444951 IGLV2-23P01705 113 aa13.68□□□□□ -0.22
LIME1-202ENST00000444951 IGKV1D-39P04432 117 aa13.68□□□□□ -0.22
LIME1-202ENST00000444951 MDKP21741 143 aaPredicted RBP13.68□□□□□ -0.22
LIME1-202ENST00000444951 UCP1P25874 307 aa13.68□□□□□ -0.22
LIME1-202ENST00000444951 UBE2MP61081 183 aaKnown RBP13.68□□□□□ -0.22
LIME1-202ENST00000444951 ERVK-16P61578 105 aa13.68□□□□□ -0.22
LIME1-202ENST00000444951 DHRS2Q13268 280 aa13.68□□□□□ -0.22
LIME1-202ENST00000444951 TMEM187Q14656 261 aa13.68□□□□□ -0.22
LIME1-202ENST00000444951 VMA21Q3ZAQ7 101 aa13.68□□□□□ -0.22
LIME1-202ENST00000444951 TMEM268Q5VZI3 342 aa13.68□□□□□ -0.22
LIME1-202ENST00000444951 LIN54Q6MZP7 749 aa13.68□□□□□ -0.22
LIME1-202ENST00000444951 ZNF695Q8IW36 515 aa13.68□□□□□ -0.22
LIME1-202ENST00000444951 OR8H1Q8NGG4 311 aa13.68□□□□□ -0.22
LIME1-202ENST00000444951 RNASE11Q8TAA1 199 aaKnown RBP13.68□□□□□ -0.22
LIME1-202ENST00000444951 GALNT14Q96FL9 552 aa13.68□□□□□ -0.22
LIME1-202ENST00000444951 RHOVQ96L33 236 aa13.68□□□□□ -0.22
LIME1-202ENST00000444951 RNF5Q99942 180 aa13.68□□□□□ -0.22
LIME1-202ENST00000444951 RAB18Q9NP72 206 aa13.68□□□□□ -0.22
LIME1-202ENST00000444951 TPSG1Q9NRR2 321 aa13.68□□□□□ -0.22
LIME1-202ENST00000444951 COMMD9Q9P000 198 aa13.68□□□□□ -0.22
LIME1-202ENST00000444951 B3GALNT1O75752 331 aa13.67□□□□□ -0.22
LIME1-202ENST00000444951 CRYBA1P05813 215 aa13.67□□□□□ -0.22
LIME1-202ENST00000444951 SAA1P0DJI8 122 aaPredicted RBP13.67□□□□□ -0.22
LIME1-202ENST00000444951 NQO2P16083 231 aa13.67□□□□□ -0.22
LIME1-202ENST00000444951 ANKRD55Q3KP44 614 aa13.67□□□□□ -0.22
LIME1-202ENST00000444951 C16orf82Q7Z2V1 217 aa13.67□□□□□ -0.22
LIME1-202ENST00000444951 LYG2Q86SG7 212 aa13.67□□□□□ -0.22
LIME1-202ENST00000444951 C5orf56Q8N8D9 126 aa13.67□□□□□ -0.22
LIME1-202ENST00000444951 Q8N9W7 124 aa13.67□□□□□ -0.22
LIME1-202ENST00000444951 NPBQ8NG41 125 aa13.67□□□□□ -0.22
LIME1-202ENST00000444951 LHFPL5Q8TAF8 219 aa13.67□□□□□ -0.22
LIME1-202ENST00000444951 MARCH11A6NNE9 402 aa13.66□□□□□ -0.22
LIME1-202ENST00000444951 AKR1C2P52895 323 aa13.66□□□□□ -0.22
LIME1-202ENST00000444951 UBE2KP61086 200 aa13.66□□□□□ -0.22
LIME1-202ENST00000444951 GNB1P62873 340 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms