RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 DLX6P56179 175 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 PJVKQ0ZLH3 352 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 TMEM177Q53S58 311 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 TMEM14EPQ6UXP3 125 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 Q6ZRG5 221 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 BEND2Q8NDZ0 799 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 OR4C13Q8NGP0 309 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 PSMG3Q9BT73 122 aaPredicted RBP4.93□□□□□ -1.62
VPS50-205ENST00000441602 BET1LQ9NYM9 111 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 TCF19Q9Y242 345 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 ZNF257Q9Y2Q1 563 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 CACNA1DQ01668 2161 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 TANC2Q9HCD6 1990 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 MFSD2BA6NFX1 497 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 C15orf61A6NNL5 157 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 KIAA1324LA8MWY0 1029 aaPredicted RBP4.93□□□□□ -1.62
VPS50-205ENST00000441602 FOXH1O75593 365 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 MMP23AO75900 390 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 KBTBD11O94819 623 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 MBP02144 154 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 CT45A6P0DMU7 189 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 CT45A5P0DMU8 189 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 CT45A7P0DMV0 189 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 ATP6V0CP27449 155 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 ZNF137PP52743 207 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 OR2B8PP59922 312 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 ZNF616Q08AN1 781 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 RAB31Q13636 194 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 AARDQ4LEZ3 155 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 OR8G2PQ6IF36 304 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 TMEM182Q6ZP80 229 aaPredicted RBP4.93□□□□□ -1.62
VPS50-205ENST00000441602 OR5B3Q8NH48 314 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 NARS2Q96I59 477 aaKnown RBP4.93□□□□□ -1.62
VPS50-205ENST00000441602 NABP2Q9BQ15 211 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 ZNF251Q9BRH9 671 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 GGACTQ9BVM4 153 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 HINT2Q9BX68 163 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 QTRT1Q9BXR0 403 aaKnown RBP4.93□□□□□ -1.62
VPS50-205ENST00000441602 COMMD5Q9GZQ3 224 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 WFDC1Q9HC57 220 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 TIMM9Q9Y5J7 89 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 ICE1Q9Y2F5 2266 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 IGHV2-26A0A0B4J1V2 119 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 ACTL6BO94805 426 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 OR9G9P0C7N8 305 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 COX7A1P24310 79 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 CDKN1AP38936 164 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 SUB1P53999 127 aaKnown RBP eCLIP4.93□□□□□ -1.62
VPS50-205ENST00000441602 RELBQ01201 579 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 HLA-DRB5Q30154 266 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 PXDC1Q5TGL8 231 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 OR4A47Q6IF82 309 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 CLEC9AQ6UXN8 241 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 C1orf122Q6ZSJ8 110 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 CCDC28AQ8IWP9 274 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 ZNF525Q8N782 197 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 OR5AN1Q8NGI8 311 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 OR1L8Q8NGR8 309 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 FAM213BQ8TBF2 198 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 CCL19Q99731 98 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 PIMREGQ9BSJ6 248 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 MS4A7Q9GZW8 240 aaPredicted RBP4.93□□□□□ -1.62
VPS50-205ENST00000441602 TREM1Q9NP99 234 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 OR51B2Q9Y5P1 312 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 DIDO1Q9BTC0 2240 aaKnown RBP4.93□□□□□ -1.62
VPS50-205ENST00000441602 OOSP1A8MZH6 123 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 H0YJW9 148 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 IFNA4P05014 189 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 ZP3P21754 424 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 LGALS4P56470 323 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 DLK1P80370 383 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 ERHP84090 104 aaKnown RBP4.92□□□□□ -1.62
VPS50-205ENST00000441602 SERF2P84101 59 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 PEA15Q15121 130 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 CCDC144NLQ6NUI1 221 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 ZNF841Q6ZN19 808 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 ETV3LQ6ZN32 361 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 MOB3BQ86TA1 216 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 THNSL2Q86YJ6 484 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 ODF3L1Q8IXM7 274 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 PUSL1Q8N0Z8 303 aaKnown RBP4.92□□□□□ -1.62
VPS50-205ENST00000441602 LY6G5BQ8NDX9 201 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 RNF5Q99942 180 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 HRH4Q9H3N8 390 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 INSIG2Q9Y5U4 225 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 COL6A6A6NMZ7 2263 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 ANKHD1Q8IWZ3 2542 aaKnown RBP4.92□□□□□ -1.62
VPS50-205ENST00000441602 NDUFS8O00217 210 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 MPDU1O75352 247 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 PROP1O75360 226 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 TMEM50AO95807 157 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 IFNA1P01562 189 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 HTR1DP28221 377 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 SNCAP37840 140 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 TOR2AQ5JU69 321 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 BSCL2Q96G97 398 aaPredicted RBP4.92□□□□□ -1.62
VPS50-205ENST00000441602 KPTNQ9Y664 436 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 SPTBN4Q9H254 2564 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 C19orf84I3L1E1 186 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 PRTN3P24158 256 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms