RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 PPIAL4CA0A0B4J2A2 164 aa11.85□□□□□ -0.51
TNFRSF1A-204ENST00000440083 A0A1W2PPE3 182 aa11.85□□□□□ -0.51
TNFRSF1A-204ENST00000440083 LINC00473A8K010 186 aa11.85□□□□□ -0.51
TNFRSF1A-204ENST00000440083 RAMP3O60896 148 aa11.85□□□□□ -0.51
TNFRSF1A-204ENST00000440083 FCGR3BO75015 233 aa11.85□□□□□ -0.51
TNFRSF1A-204ENST00000440083 SAA2P0DJI9 122 aaPredicted RBP11.85□□□□□ -0.51
TNFRSF1A-204ENST00000440083 CAV2P51636 162 aa11.85□□□□□ -0.51
TNFRSF1A-204ENST00000440083 ERVK-16P61578 105 aa11.85□□□□□ -0.51
TNFRSF1A-204ENST00000440083 RPL23AP62750 156 aaKnown RBP11.85□□□□□ -0.51
TNFRSF1A-204ENST00000440083 RPL39P5Q59GN2 51 aa11.85□□□□□ -0.51
TNFRSF1A-204ENST00000440083 CT45A1Q5HYN5 189 aa11.85□□□□□ -0.51
TNFRSF1A-204ENST00000440083 CXorf66Q5JRM2 361 aaPredicted RBP11.85□□□□□ -0.51
TNFRSF1A-204ENST00000440083 HEPN1Q6WQI6 88 aa11.85□□□□□ -0.51
TNFRSF1A-204ENST00000440083 ZNF439Q8NDP4 499 aa11.85□□□□□ -0.51
TNFRSF1A-204ENST00000440083 DMBX1Q8NFW5 382 aa11.85□□□□□ -0.51
TNFRSF1A-204ENST00000440083 CT45A3Q8NHU0 189 aa11.85□□□□□ -0.51
TNFRSF1A-204ENST00000440083 MAGT1Q9H0U3 335 aa11.85□□□□□ -0.51
TNFRSF1A-204ENST00000440083 FBXL17Q9UF56 701 aa11.85□□□□□ -0.51
TNFRSF1A-204ENST00000440083 CDC42EP3Q9UKI2 254 aa11.85□□□□□ -0.51
TNFRSF1A-204ENST00000440083 IGHV3OR16-10A0A075B7F0 116 aa11.84□□□□□ -0.51
TNFRSF1A-204ENST00000440083 BORCS7-ASMTA0A0B4J1R7 106 aa11.84□□□□□ -0.51
TNFRSF1A-204ENST00000440083 J3QLI3 93 aa11.84□□□□□ -0.51
TNFRSF1A-204ENST00000440083 GPR37O15354 613 aa11.84□□□□□ -0.51
TNFRSF1A-204ENST00000440083 ENSAO43768 121 aaKnown RBP11.84□□□□□ -0.51
TNFRSF1A-204ENST00000440083 PITX3O75364 302 aa11.84□□□□□ -0.51
TNFRSF1A-204ENST00000440083 S100A1P23297 94 aa11.84□□□□□ -0.51
TNFRSF1A-204ENST00000440083 G6PCP35575 357 aa11.84□□□□□ -0.51
TNFRSF1A-204ENST00000440083 SRP14P37108 136 aaKnown RBP11.84□□□□□ -0.51
TNFRSF1A-204ENST00000440083 ZNF134P52741 427 aa11.84□□□□□ -0.51
TNFRSF1A-204ENST00000440083 RIPPLY3P57055 190 aa11.84□□□□□ -0.51
TNFRSF1A-204ENST00000440083 ID3Q02535 119 aa11.84□□□□□ -0.51
TNFRSF1A-204ENST00000440083 PRB3Q04118 309 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF1A-204ENST00000440083 PAX8Q06710 450 aa11.84□□□□□ -0.51
TNFRSF1A-204ENST00000440083 H2BFWTQ7Z2G1 175 aa11.84□□□□□ -0.51
TNFRSF1A-204ENST00000440083 OR2C3Q8N628 320 aa11.84□□□□□ -0.51
TNFRSF1A-204ENST00000440083 OR4S2Q8NH73 311 aa11.84□□□□□ -0.51
TNFRSF1A-204ENST00000440083 RAB40CQ96S21 281 aa11.84□□□□□ -0.51
TNFRSF1A-204ENST00000440083 AUP1Q9Y679 476 aa11.84□□□□□ -0.51
TNFRSF1A-204ENST00000440083 ATRQ13535 2644 aa11.83□□□□□ -0.52
TNFRSF1A-204ENST00000440083 RPS10-NUDT3A0A1W2PQS6 291 aa11.83□□□□□ -0.52
TNFRSF1A-204ENST00000440083 FAM90A26D6RGX4 464 aa11.83□□□□□ -0.52
TNFRSF1A-204ENST00000440083 RBFOX2O43251 390 aaKnown RBP eCLIP11.83□□□□□ -0.522e-7■■■■□ 22.6
TNFRSF1A-204ENST00000440083 MED6O75586 246 aa11.83□□□□□ -0.52
TNFRSF1A-204ENST00000440083 MMP23AO75900 390 aa11.83□□□□□ -0.52
TNFRSF1A-204ENST00000440083 HPRT1P00492 218 aa11.83□□□□□ -0.52
TNFRSF1A-204ENST00000440083 KRASP01116 189 aa11.83□□□□□ -0.52
TNFRSF1A-204ENST00000440083 SRD5A1P18405 259 aa11.83□□□□□ -0.52
TNFRSF1A-204ENST00000440083 HNF1AP20823 631 aa11.83□□□□□ -0.52
TNFRSF1A-204ENST00000440083 GATA3P23771 443 aa11.83□□□□□ -0.52
TNFRSF1A-204ENST00000440083 EWSR1Q01844 656 aaKnown RBP eCLIP11.83□□□□□ -0.52
TNFRSF1A-204ENST00000440083 IZUMO4Q1ZYL8 232 aa11.83□□□□□ -0.52
TNFRSF1A-204ENST00000440083 NCR3LG1Q68D85 454 aa11.83□□□□□ -0.52
TNFRSF1A-204ENST00000440083 EIF5AL1Q6IS14 154 aaKnown RBP11.83□□□□□ -0.52
TNFRSF1A-204ENST00000440083 SLC25A48Q6ZT89 311 aaKnown RBP11.83□□□□□ -0.52
TNFRSF1A-204ENST00000440083 BAP18Q8IXM2 172 aa11.83□□□□□ -0.52
TNFRSF1A-204ENST00000440083 R3HDM4Q96D70 268 aa11.83□□□□□ -0.52
TNFRSF1A-204ENST00000440083 SMIM3Q9BZL3 60 aa11.83□□□□□ -0.52
TNFRSF1A-204ENST00000440083 SLC25A32Q9H2D1 315 aa11.83□□□□□ -0.52
TNFRSF1A-204ENST00000440083 LYRM2Q9NU23 88 aaPredicted RBP11.83□□□□□ -0.52
TNFRSF1A-204ENST00000440083 COA4Q9NYJ1 87 aa11.83□□□□□ -0.52
TNFRSF1A-204ENST00000440083 LINC00862A6NCI5 91 aa11.82□□□□□ -0.52
TNFRSF1A-204ENST00000440083 TOR1AO14656 332 aa11.82□□□□□ -0.52
TNFRSF1A-204ENST00000440083 RBMXL2O75526 392 aaKnown RBP11.82□□□□□ -0.52
TNFRSF1A-204ENST00000440083 JTBO76095 146 aa11.82□□□□□ -0.52
TNFRSF1A-204ENST00000440083 FSHBP01225 129 aa11.82□□□□□ -0.52
TNFRSF1A-204ENST00000440083 GAPDHP04406 335 aaKnown RBP11.82□□□□□ -0.52
TNFRSF1A-204ENST00000440083 IL3RAP26951 378 aa11.82□□□□□ -0.52
TNFRSF1A-204ENST00000440083 DLX1P56177 255 aa11.82□□□□□ -0.52
TNFRSF1A-204ENST00000440083 ARF6P62330 175 aa11.82□□□□□ -0.52
TNFRSF1A-204ENST00000440083 KLF17Q5JT82 389 aaPredicted RBP11.82□□□□□ -0.52
TNFRSF1A-204ENST00000440083 PDZD9Q8IXQ8 264 aa11.82□□□□□ -0.52
TNFRSF1A-204ENST00000440083 LY6G5BQ8NDX9 201 aa11.82□□□□□ -0.52
TNFRSF1A-204ENST00000440083 C11orf1Q9H5F2 150 aa11.82□□□□□ -0.52
TNFRSF1A-204ENST00000440083 CYTL1Q9NRR1 136 aa11.82□□□□□ -0.52
TNFRSF1A-204ENST00000440083 ONECUT1Q9UBC0 465 aa11.82□□□□□ -0.52
TNFRSF1A-204ENST00000440083 SESN1Q9Y6P5 492 aa11.82□□□□□ -0.52
TNFRSF1A-204ENST00000440083 FAM24AA6NFZ4 105 aa11.81□□□□□ -0.52
TNFRSF1A-204ENST00000440083 MARCH11A6NNE9 402 aa11.81□□□□□ -0.52
TNFRSF1A-204ENST00000440083 SYNGR2O43760 224 aa11.81□□□□□ -0.52
TNFRSF1A-204ENST00000440083 CHST1O43916 411 aa11.81□□□□□ -0.52
TNFRSF1A-204ENST00000440083 FAM157CP0CG43 387 aa11.81□□□□□ -0.52
TNFRSF1A-204ENST00000440083 PPIAL4GP0DN37 164 aa11.81□□□□□ -0.52
TNFRSF1A-204ENST00000440083 IGHV4-38-2P0DP08 117 aa11.81□□□□□ -0.52
TNFRSF1A-204ENST00000440083 BAXQ07812 192 aa11.81□□□□□ -0.52
TNFRSF1A-204ENST00000440083 RTL8BQ17RB0 113 aa11.81□□□□□ -0.52
TNFRSF1A-204ENST00000440083 RPL7L1Q6DKI1 246 aaKnown RBP11.81□□□□□ -0.52
TNFRSF1A-204ENST00000440083 Q6ZRM9 215 aa11.81□□□□□ -0.52
TNFRSF1A-204ENST00000440083 STX12Q86Y82 276 aa11.81□□□□□ -0.52
TNFRSF1A-204ENST00000440083 C8orf31Q8N9H6 132 aa11.81□□□□□ -0.52
TNFRSF1A-204ENST00000440083 OR10X1Q8NGY0 326 aa11.81□□□□□ -0.52
TNFRSF1A-204ENST00000440083 C8orf46Q8TAG6 207 aa11.81□□□□□ -0.52
TNFRSF1A-204ENST00000440083 PCNPQ8WW12 178 aaKnown RBP11.81□□□□□ -0.52
TNFRSF1A-204ENST00000440083 TBX15Q96SF7 602 aa11.81□□□□□ -0.52
TNFRSF1A-204ENST00000440083 PCGF1Q9BSM1 259 aa11.81□□□□□ -0.52
TNFRSF1A-204ENST00000440083 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.81□□□□□ -0.52
TNFRSF1A-204ENST00000440083 PFDN2Q9UHV9 154 aa11.81□□□□□ -0.52
TNFRSF1A-204ENST00000440083 SOX21Q9Y651 276 aaPredicted RBP11.81□□□□□ -0.52
TNFRSF1A-204ENST00000440083 hCG_1809904A0A1W2PP81 198 aa11.8□□□□□ -0.52
TNFRSF1A-204ENST00000440083 A0A1W2PPE2 198 aa11.8□□□□□ -0.52
TNFRSF1A-204ENST00000440083 A0A1W2PR64 198 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms