RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 GNG4P50150 75 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 PAFAH1B2P68402 229 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 Q6ZWC4 215 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 NHLRC2Q8NBF2 726 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 OR2Y1Q8NGV0 311 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 NANOS1Q8WY41 292 aaKnown RBP7.62□□□□□ -1.19
COPB1-202ENST00000439561 SLC35D1Q9NTN3 355 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 TBL2Q9Y4P3 447 aaKnown RBP7.62□□□□□ -1.19
COPB1-202ENST00000439561 WIPI2Q9Y4P8 454 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 TRANK1O15050 2925 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 A0A1B0GWJ7 208 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 CBY3A6NI87 242 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 F2Z2F3 143 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 HSBP1O75506 76 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 OR5G3P0C626 314 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 NPPCP23582 126 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 EPHA8P29322 1005 aaPredicted RBP7.62□□□□□ -1.19
COPB1-202ENST00000439561 FABP6P51161 128 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 TMEM14EPQ6UXP3 125 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 GGNQ86UU5 652 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 PYGO2Q9BRQ0 406 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 ELOVL5Q9NYP7 299 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 TIMM9Q9Y5J7 89 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 REV3LO60673 3130 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 TOX3O15405 576 aaPredicted RBP7.61□□□□□ -1.19
COPB1-202ENST00000439561 PSG5Q15238 335 aa7.61□□□□□ -1.19
COPB1-202ENST00000439561 TBC1D28Q2M2D7 210 aa7.61□□□□□ -1.19
COPB1-202ENST00000439561 ALKBH6Q3KRA9 238 aa7.61□□□□□ -1.19
COPB1-202ENST00000439561 DCAF10Q5QP82 559 aa7.61□□□□□ -1.19
COPB1-202ENST00000439561 MMD2Q8IY49 270 aa7.61□□□□□ -1.19
COPB1-202ENST00000439561 SAXO1Q8IYX7 474 aa7.61□□□□□ -1.19
COPB1-202ENST00000439561 SCCPDHQ8NBX0 429 aa7.61□□□□□ -1.19
COPB1-202ENST00000439561 ST6GALNAC3Q8NDV1 305 aa7.61□□□□□ -1.19
COPB1-202ENST00000439561 TAAR6Q96RI8 345 aa7.61□□□□□ -1.19
COPB1-202ENST00000439561 HSD17B10Q99714 261 aaKnown RBP7.61□□□□□ -1.19
COPB1-202ENST00000439561 LRFN3Q9BTN0 628 aa7.61□□□□□ -1.19
COPB1-202ENST00000439561 DEFB127Q9H1M4 99 aa7.61□□□□□ -1.19
COPB1-202ENST00000439561 ZNF331Q9NQX6 463 aaPredicted RBP7.61□□□□□ -1.19
COPB1-202ENST00000439561 PRRC2CQ9Y520 2896 aaKnown RBP7.61□□□□□ -1.19
COPB1-202ENST00000439561 SPINT2O43291 252 aa7.61□□□□□ -1.19
COPB1-202ENST00000439561 OR10J4P0C629 311 aa7.61□□□□□ -1.19
COPB1-202ENST00000439561 SFTPCP11686 197 aa7.61□□□□□ -1.19
COPB1-202ENST00000439561 BRS3P32247 399 aa7.61□□□□□ -1.19
COPB1-202ENST00000439561 MAGEA5P43359 124 aa7.61□□□□□ -1.19
COPB1-202ENST00000439561 TRA2AQ13595 282 aaKnown RBP eCLIP7.61□□□□□ -1.19
COPB1-202ENST00000439561 Q56UQ5 140 aa7.61□□□□□ -1.19
COPB1-202ENST00000439561 COA6Q5JTJ3 125 aaKnown RBP7.61□□□□□ -1.19
COPB1-202ENST00000439561 MRPL14Q6P1L8 145 aaKnown RBP7.61□□□□□ -1.19
COPB1-202ENST00000439561 ZNF645Q8N7E2 425 aa7.61□□□□□ -1.19
COPB1-202ENST00000439561 CNEP1R1Q8N9A8 125 aa7.61□□□□□ -1.19
COPB1-202ENST00000439561 DCTN5Q9BTE1 182 aa7.61□□□□□ -1.19
COPB1-202ENST00000439561 PROK2Q9HC23 129 aa7.61□□□□□ -1.19
COPB1-202ENST00000439561 KCNIP2Q9NS61 270 aa7.61□□□□□ -1.19
COPB1-202ENST00000439561 ABI3Q9P2A4 366 aa7.61□□□□□ -1.19
COPB1-202ENST00000439561 GTF3C1Q12789 2109 aa7.61□□□□□ -1.19
COPB1-202ENST00000439561 C12orf77C9JDV5 145 aa7.6□□□□□ -1.19
COPB1-202ENST00000439561 FAM90A26D6RGX4 464 aa7.6□□□□□ -1.19
COPB1-202ENST00000439561 DNPH1O43598 174 aa7.6□□□□□ -1.19
COPB1-202ENST00000439561 TIMM8AO60220 97 aaPredicted RBP7.6□□□□□ -1.19
COPB1-202ENST00000439561 TNFSF13O75888 250 aa7.6□□□□□ -1.19
COPB1-202ENST00000439561 NEURL1O76050 574 aa7.6□□□□□ -1.19
COPB1-202ENST00000439561 SRIP30626 198 aa7.6□□□□□ -1.19
COPB1-202ENST00000439561 CAMPP49913 170 aa7.6□□□□□ -1.19
COPB1-202ENST00000439561 RNASEKQ6P5S7 137 aaKnown RBP7.6□□□□□ -1.19
COPB1-202ENST00000439561 PQLC2Q6ZP29 291 aa7.6□□□□□ -1.19
COPB1-202ENST00000439561 MDP1Q86V88 176 aa7.6□□□□□ -1.19
COPB1-202ENST00000439561 IMMP1LQ96LU5 166 aa7.6□□□□□ -1.19
COPB1-202ENST00000439561 PRR14LQ5THK1 2151 aa7.6□□□□□ -1.19
COPB1-202ENST00000439561 TMEM210A6NLX4 147 aa7.6□□□□□ -1.19
COPB1-202ENST00000439561 CXorf1O96002 111 aa7.6□□□□□ -1.19
COPB1-202ENST00000439561 CRYBB3P26998 211 aa7.6□□□□□ -1.19
COPB1-202ENST00000439561 HES3Q5TGS1 186 aa7.6□□□□□ -1.19
COPB1-202ENST00000439561 Q6ZVH6 145 aa7.6□□□□□ -1.19
COPB1-202ENST00000439561 OR4C5Q8NGB2 326 aa7.6□□□□□ -1.19
COPB1-202ENST00000439561 FAM216AQ8WUB2 273 aa7.6□□□□□ -1.19
COPB1-202ENST00000439561 ZNF576Q9H609 170 aa7.6□□□□□ -1.19
COPB1-202ENST00000439561 HSPB7Q9UBY9 170 aa7.6□□□□□ -1.19
COPB1-202ENST00000439561 ZNF318Q5VUA4 2279 aa7.6□□□□□ -1.19
COPB1-202ENST00000439561 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.6□□□□□ -1.19
COPB1-202ENST00000439561 PINLYPA6NC86 204 aa7.6□□□□□ -1.19
COPB1-202ENST00000439561 ZNF503-AS2A6NEH8 195 aa7.6□□□□□ -1.19
COPB1-202ENST00000439561 LYZL6O75951 148 aa7.6□□□□□ -1.19
COPB1-202ENST00000439561 KRTCAP3Q53RY4 240 aa7.6□□□□□ -1.19
COPB1-202ENST00000439561 VPS25Q9BRG1 176 aa7.6□□□□□ -1.19
COPB1-202ENST00000439561 RNASE7Q9H1E1 156 aaKnown RBP7.6□□□□□ -1.19
COPB1-202ENST00000439561 ABCA1O95477 2261 aa7.6□□□□□ -1.19
COPB1-202ENST00000439561 CFAP54Q96N23 3096 aa7.6□□□□□ -1.19
COPB1-202ENST00000439561 CELSR3Q9NYQ7 3312 aa7.6□□□□□ -1.19
COPB1-202ENST00000439561 HELTA6NFD8 242 aa7.59□□□□□ -1.19
COPB1-202ENST00000439561 TIMP3P35625 211 aa7.59□□□□□ -1.19
COPB1-202ENST00000439561 ASPHD1Q5U4P2 390 aa7.59□□□□□ -1.19
COPB1-202ENST00000439561 ABLIM2Q6H8Q1 611 aa7.59□□□□□ -1.19
COPB1-202ENST00000439561 Q6ZS49 121 aa7.59□□□□□ -1.19
COPB1-202ENST00000439561 SPSB4Q96A44 273 aa7.59□□□□□ -1.19
COPB1-202ENST00000439561 SLC35E1Q96K37 410 aa7.59□□□□□ -1.19
COPB1-202ENST00000439561 SSBP3Q9BWW4 388 aaPredicted RBP7.59□□□□□ -1.19
COPB1-202ENST00000439561 DUSP13Q9UII6 198 aa7.59□□□□□ -1.19
COPB1-202ENST00000439561 ARL2-SNX15V9GYD0 113 aa7.59□□□□□ -1.19
COPB1-202ENST00000439561 GPR179Q6PRD1 2367 aa7.59□□□□□ -1.19
COPB1-202ENST00000439561 TRIOBPQ9H2D6 2365 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms