RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 IDO2Q6ZQW0 420 aa15.29■□□□□ 0.04
SEMA3B-206ENST00000439487 TEX45Q8NA69 505 aa15.29■□□□□ 0.04
SEMA3B-206ENST00000439487 THAP7Q9BT49 309 aaPredicted RBP15.29■□□□□ 0.04
SEMA3B-206ENST00000439487 FAM103A1Q9BTL3 118 aaKnown RBP15.29■□□□□ 0.04
SEMA3B-206ENST00000439487 GON7Q9BXV9 100 aa15.29■□□□□ 0.04
SEMA3B-206ENST00000439487 ANKRD20A5PA0PJZ0 165 aa15.28■□□□□ 0.04
SEMA3B-206ENST00000439487 A6NHS1 94 aa15.28■□□□□ 0.04
SEMA3B-206ENST00000439487 ADARB2-AS1A8MUL3 147 aa15.28■□□□□ 0.04
SEMA3B-206ENST00000439487 ARPC1BO15143 372 aaKnown RBP15.28■□□□□ 0.04
SEMA3B-206ENST00000439487 TSPAN15O95858 294 aa15.28■□□□□ 0.04
SEMA3B-206ENST00000439487 AKAIN1P0CW23 69 aa15.28■□□□□ 0.04
SEMA3B-206ENST00000439487 SAA1P0DJI8 122 aaPredicted RBP15.28■□□□□ 0.04
SEMA3B-206ENST00000439487 EGR2P11161 476 aaPredicted RBP15.28■□□□□ 0.04
SEMA3B-206ENST00000439487 PGAM2P15259 253 aa15.28■□□□□ 0.04
SEMA3B-206ENST00000439487 GNB1P62873 340 aa15.28■□□□□ 0.04
SEMA3B-206ENST00000439487 CFHR3Q02985 330 aa15.28■□□□□ 0.04
SEMA3B-206ENST00000439487 MRGPRG-AS1Q2M3A8 158 aa15.28■□□□□ 0.04
SEMA3B-206ENST00000439487 C2orf68Q2NKX9 166 aa15.28■□□□□ 0.04
SEMA3B-206ENST00000439487 SCGB2B2Q4G0G5 96 aa15.28■□□□□ 0.04
SEMA3B-206ENST00000439487 KHDC1LQ5JSQ8 128 aa15.28■□□□□ 0.04
SEMA3B-206ENST00000439487 PRR31Q5SQ13 230 aa15.28■□□□□ 0.04
SEMA3B-206ENST00000439487 NDUFA11Q86Y39 141 aa15.28■□□□□ 0.04
SEMA3B-206ENST00000439487 CMTM1Q8IZ96 169 aa15.28■□□□□ 0.04
SEMA3B-206ENST00000439487 VKORC1L1Q8N0U8 176 aa15.28■□□□□ 0.04
SEMA3B-206ENST00000439487 OR4C16Q8NGL9 310 aa15.28■□□□□ 0.04
SEMA3B-206ENST00000439487 ZNF580Q9UK33 172 aa15.28■□□□□ 0.04
SEMA3B-206ENST00000439487 TRAV41A0A0B4J266 112 aa15.27■□□□□ 0.04
SEMA3B-206ENST00000439487 CNIH1O95406 144 aa15.27■□□□□ 0.04
SEMA3B-206ENST00000439487 PTBP1P26599 531 aaKnown RBP eCLIP15.27■□□□□ 0.04
SEMA3B-206ENST00000439487 PPP5CP53041 499 aa15.27■□□□□ 0.04
SEMA3B-206ENST00000439487 SSBP2P81877 361 aaPredicted RBP15.27■□□□□ 0.04
SEMA3B-206ENST00000439487 FXYD3Q14802 87 aa15.27■□□□□ 0.04
SEMA3B-206ENST00000439487 MEF2DQ14814 521 aa15.27■□□□□ 0.04
SEMA3B-206ENST00000439487 ECSCRQ19T08 205 aa15.27■□□□□ 0.04
SEMA3B-206ENST00000439487 SPANXN2Q5MJ10 180 aa15.27■□□□□ 0.04
SEMA3B-206ENST00000439487 TEX38Q6PEX7 206 aa15.27■□□□□ 0.04
SEMA3B-206ENST00000439487 SLC38A6Q8IZM9 456 aa15.27■□□□□ 0.04
SEMA3B-206ENST00000439487 Q8N402 240 aa15.27■□□□□ 0.04
SEMA3B-206ENST00000439487 TSSC4Q9Y5U2 329 aaPredicted RBP15.27■□□□□ 0.04
SEMA3B-206ENST00000439487 DISC1C4P0D8 188 aa15.26■□□□□ 0.03
SEMA3B-206ENST00000439487 RBFOX2O43251 390 aaKnown RBP eCLIP15.26■□□□□ 0.032e-14■■□□□ 12.7
SEMA3B-206ENST00000439487 OPN1MWP04001 364 aa15.26■□□□□ 0.03
SEMA3B-206ENST00000439487 OPN1MW2P0DN77 364 aa15.26■□□□□ 0.03
SEMA3B-206ENST00000439487 OPN1MW3P0DN78 364 aa15.26■□□□□ 0.03
SEMA3B-206ENST00000439487 PPIFP30405 207 aaKnown RBP15.26■□□□□ 0.03
SEMA3B-206ENST00000439487 ETV6P41212 452 aa15.26■□□□□ 0.03
SEMA3B-206ENST00000439487 LCNL1Q6ZST4 164 aa15.26■□□□□ 0.03
SEMA3B-206ENST00000439487 SSX9Q7RTT3 188 aa15.26■□□□□ 0.03
SEMA3B-206ENST00000439487 COMMD1Q8N668 190 aa15.26■□□□□ 0.03
SEMA3B-206ENST00000439487 TERB2Q8NHR7 220 aa15.26■□□□□ 0.03
SEMA3B-206ENST00000439487 GRPEL2Q8TAA5 225 aa15.26■□□□□ 0.03
SEMA3B-206ENST00000439487 ARPC1AQ92747 370 aa15.26■□□□□ 0.03
SEMA3B-206ENST00000439487 NUBP2Q9Y5Y2 271 aa15.26■□□□□ 0.03
SEMA3B-206ENST00000439487 HPRT1P00492 218 aa15.25■□□□□ 0.03
SEMA3B-206ENST00000439487 HRASP01112 189 aa15.25■□□□□ 0.03
SEMA3B-206ENST00000439487 PI3P19957 117 aa15.25■□□□□ 0.03
SEMA3B-206ENST00000439487 CRIP2P52943 208 aaPredicted RBP15.25■□□□□ 0.03
SEMA3B-206ENST00000439487 PRSS8Q16651 343 aa15.25■□□□□ 0.03
SEMA3B-206ENST00000439487 TBC1D26Q86UD7 250 aa15.25■□□□□ 0.03
SEMA3B-206ENST00000439487 POC5Q8NA72 575 aa15.25■□□□□ 0.03
SEMA3B-206ENST00000439487 LFNGQ8NES3 379 aa15.25■□□□□ 0.03
SEMA3B-206ENST00000439487 FAM110DQ8TAY7 271 aaPredicted RBP15.25■□□□□ 0.03
SEMA3B-206ENST00000439487 MRGPRFQ96AM1 343 aa15.25■□□□□ 0.03
SEMA3B-206ENST00000439487 OR2A4O95047 310 aa15.24■□□□□ 0.03
SEMA3B-206ENST00000439487 S1PR2O95136 353 aa15.24■□□□□ 0.03
SEMA3B-206ENST00000439487 IGHG4P01861 327 aa15.24■□□□□ 0.03
SEMA3B-206ENST00000439487 RPLP1P05386 114 aaKnown RBP15.24■□□□□ 0.03
SEMA3B-206ENST00000439487 F2RP25116 425 aa15.24■□□□□ 0.03
SEMA3B-206ENST00000439487 S100GP29377 79 aa15.24■□□□□ 0.03
SEMA3B-206ENST00000439487 FOXE3Q13461 319 aa15.24■□□□□ 0.03
SEMA3B-206ENST00000439487 TNXAQ16473 311 aa15.24■□□□□ 0.03
SEMA3B-206ENST00000439487 C19orf54Q5BKX5 351 aa15.24■□□□□ 0.03
SEMA3B-206ENST00000439487 UNQ5815/PRO19632Q6UWF5 114 aa15.24■□□□□ 0.03
SEMA3B-206ENST00000439487 PUSL1Q8N0Z8 303 aaKnown RBP15.24■□□□□ 0.03
SEMA3B-206ENST00000439487 MINDY2Q8NBR6 621 aa15.24■□□□□ 0.03
SEMA3B-206ENST00000439487 MARCH1Q8TCQ1 289 aa15.24■□□□□ 0.03
SEMA3B-206ENST00000439487 CD300LFQ8TDQ1 290 aa15.24■□□□□ 0.03
SEMA3B-206ENST00000439487 TRIM63Q969Q1 353 aa15.24■□□□□ 0.03
SEMA3B-206ENST00000439487 RHOVQ96L33 236 aa15.24■□□□□ 0.03
SEMA3B-206ENST00000439487 OR2A7Q96R45 310 aa15.24■□□□□ 0.03
SEMA3B-206ENST00000439487 SRRQ9GZT4 340 aa15.24■□□□□ 0.03
SEMA3B-206ENST00000439487 ZNF430Q9H8G1 570 aaPredicted RBP15.24■□□□□ 0.03
SEMA3B-206ENST00000439487 SLC2A9Q9NRM0 540 aa15.24■□□□□ 0.03
SEMA3B-206ENST00000439487 A0A1W2PN81 502 aa15.23■□□□□ 0.03
SEMA3B-206ENST00000439487 ELANEP08246 267 aa15.23■□□□□ 0.03
SEMA3B-206ENST00000439487 CHRNA7P36544 502 aa15.23■□□□□ 0.03
SEMA3B-206ENST00000439487 LPAR6P43657 344 aa15.23■□□□□ 0.03
SEMA3B-206ENST00000439487 TAS2R31P59538 309 aa15.23■□□□□ 0.03
SEMA3B-206ENST00000439487 RPL23AP62750 156 aaKnown RBP15.23■□□□□ 0.03
SEMA3B-206ENST00000439487 TMEM267Q0VDI3 215 aaPredicted RBP15.23■□□□□ 0.03
SEMA3B-206ENST00000439487 CNPY1Q3B7I2 92 aa15.23■□□□□ 0.03
SEMA3B-206ENST00000439487 CXorf66Q5JRM2 361 aaPredicted RBP15.23■□□□□ 0.03
SEMA3B-206ENST00000439487 TREML4Q6UXN2 200 aa15.23■□□□□ 0.03
SEMA3B-206ENST00000439487 C18orf65Q6ZTR6 163 aa15.23■□□□□ 0.03
SEMA3B-206ENST00000439487 OR51S1Q8NGJ8 323 aa15.23■□□□□ 0.03
SEMA3B-206ENST00000439487 OR13C8Q8NGS7 320 aa15.23■□□□□ 0.03
SEMA3B-206ENST00000439487 R3HDM4Q96D70 268 aa15.23■□□□□ 0.03
SEMA3B-206ENST00000439487 PLEKHA2Q9HB19 425 aa15.23■□□□□ 0.03
SEMA3B-206ENST00000439487 NOTCH3Q9UM47 2321 aa15.23■□□□□ 0.03
SEMA3B-206ENST00000439487 KBTBD11O94819 623 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms