RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 ZNF430Q9H8G1 570 aaPredicted RBP7.44□□□□□ -1.22
RTN4-211ENST00000438462 DNAJC4Q9NNZ3 241 aa7.44□□□□□ -1.22
RTN4-211ENST00000438462 KCNIP1Q9NZI2 227 aa7.44□□□□□ -1.22
RTN4-211ENST00000438462 RABAC1Q9UI14 185 aa7.44□□□□□ -1.22
RTN4-211ENST00000438462 SIVA1O15304 175 aa7.43□□□□□ -1.22
RTN4-211ENST00000438462 ACTL6BO94805 426 aa7.43□□□□□ -1.22
RTN4-211ENST00000438462 CRYGCP07315 174 aa7.43□□□□□ -1.22
RTN4-211ENST00000438462 ZNF688P0C7X2 276 aa7.43□□□□□ -1.22
RTN4-211ENST00000438462 UBCP0CG48 685 aaKnown RBP7.43□□□□□ -1.22
RTN4-211ENST00000438462 NUTF2P61970 127 aaKnown RBP7.43□□□□□ -1.22
RTN4-211ENST00000438462 MPV17LQ2QL34 196 aa7.43□□□□□ -1.22
RTN4-211ENST00000438462 NHLRC3Q5JS37 347 aa7.43□□□□□ -1.22
RTN4-211ENST00000438462 CPOQ8IVL8 374 aa7.43□□□□□ -1.22
RTN4-211ENST00000438462 GAPTQ8N292 157 aa7.43□□□□□ -1.22
RTN4-211ENST00000438462 OR52N1Q8NH53 320 aa7.43□□□□□ -1.22
RTN4-211ENST00000438462 TNFAIP8L1Q8WVP5 186 aa7.43□□□□□ -1.22
RTN4-211ENST00000438462 FCGR1BQ92637 280 aa7.43□□□□□ -1.22
RTN4-211ENST00000438462 GALMQ96C23 342 aa7.43□□□□□ -1.22
RTN4-211ENST00000438462 CYYR1Q96J86 154 aa7.43□□□□□ -1.22
RTN4-211ENST00000438462 IGLV11-55A0A075B6I3 123 aa7.42□□□□□ -1.22
RTN4-211ENST00000438462 TRAV2A0A0B4J234 112 aa7.42□□□□□ -1.22
RTN4-211ENST00000438462 LRCOL1A6NCL2 159 aa7.42□□□□□ -1.22
RTN4-211ENST00000438462 GABRPO00591 440 aa7.42□□□□□ -1.22
RTN4-211ENST00000438462 GSTA4O15217 222 aa7.42□□□□□ -1.22
RTN4-211ENST00000438462 NUPL2O15504 423 aaKnown RBP7.42□□□□□ -1.22
RTN4-211ENST00000438462 GASTP01350 101 aa7.42□□□□□ -1.22
RTN4-211ENST00000438462 DEFB130BP0DP73 79 aa7.42□□□□□ -1.22
RTN4-211ENST00000438462 DEFB130AP0DP74 79 aa7.42□□□□□ -1.22
RTN4-211ENST00000438462 AREGP15514 252 aa7.42□□□□□ -1.22
RTN4-211ENST00000438462 HIST1H1BP16401 226 aaKnown RBP7.42□□□□□ -1.22
RTN4-211ENST00000438462 VMA21Q3ZAQ7 101 aa7.42□□□□□ -1.22
RTN4-211ENST00000438462 CIRBP-AS1Q8TBR5 109 aa7.42□□□□□ -1.22
RTN4-211ENST00000438462 IL1F10Q8WWZ1 152 aa7.42□□□□□ -1.22
RTN4-211ENST00000438462 AGMATQ9BSE5 352 aa7.42□□□□□ -1.22
RTN4-211ENST00000438462 CHAC1Q9BUX1 264 aa7.42□□□□□ -1.22
RTN4-211ENST00000438462 MCRIP1C9JLW8 97 aa7.41□□□□□ -1.22
RTN4-211ENST00000438462 DHFRP00374 187 aa7.41□□□□□ -1.22
RTN4-211ENST00000438462 ATP5G1P05496 136 aa7.41□□□□□ -1.22
RTN4-211ENST00000438462 CAPGP40121 348 aa7.41□□□□□ -1.22
RTN4-211ENST00000438462 ATP5G3P48201 142 aa7.41□□□□□ -1.22
RTN4-211ENST00000438462 UBE2KP61086 200 aa7.41□□□□□ -1.22
RTN4-211ENST00000438462 RPL11P62913 178 aaKnown RBP7.41□□□□□ -1.22
RTN4-211ENST00000438462 IFFO1Q0D2I5 559 aa7.41□□□□□ -1.22
RTN4-211ENST00000438462 KLK9Q2XQG4 91 aa7.41□□□□□ -1.22
RTN4-211ENST00000438462 OR10K2Q6IF99 312 aa7.41□□□□□ -1.22
RTN4-211ENST00000438462 ZNF554Q86TJ5 538 aa7.41□□□□□ -1.22
RTN4-211ENST00000438462 ANKRD42Q8N9B4 389 aa7.41□□□□□ -1.22
RTN4-211ENST00000438462 AQP11Q8NBQ7 271 aa7.41□□□□□ -1.22
RTN4-211ENST00000438462 TEX47Q8TBZ9 253 aa7.41□□□□□ -1.22
RTN4-211ENST00000438462 KLK9Q9UKQ9 250 aa7.41□□□□□ -1.22
RTN4-211ENST00000438462 CCDC182A6NF36 153 aa7.4□□□□□ -1.22
RTN4-211ENST00000438462 M0R1X1 148 aa7.4□□□□□ -1.22
RTN4-211ENST00000438462 GPX5O75715 221 aa7.4□□□□□ -1.22
RTN4-211ENST00000438462 CDRT1O95170 752 aa7.4□□□□□ -1.22
RTN4-211ENST00000438462 HBE1P02100 147 aa7.4□□□□□ -1.22
RTN4-211ENST00000438462 ISG15P05161 165 aa7.4□□□□□ -1.22
RTN4-211ENST00000438462 DEFA4P12838 97 aa7.4□□□□□ -1.22
RTN4-211ENST00000438462 ZNF773Q6PK81 442 aa7.4□□□□□ -1.22
RTN4-211ENST00000438462 GGHQ92820 318 aa7.4□□□□□ -1.22
RTN4-211ENST00000438462 GNPNAT1Q96EK6 184 aaPredicted RBP7.4□□□□□ -1.22
RTN4-211ENST00000438462 BSCL2Q96G97 398 aaPredicted RBP7.4□□□□□ -1.22
RTN4-211ENST00000438462 NSL1Q96IY1 281 aa7.4□□□□□ -1.22
RTN4-211ENST00000438462 CACNG5Q9UF02 275 aa7.4□□□□□ -1.22
RTN4-211ENST00000438462 E7EUB6 86 aa7.39□□□□□ -1.23
RTN4-211ENST00000438462 PANO1I0J062 215 aa7.39□□□□□ -1.23
RTN4-211ENST00000438462 MRASO14807 208 aa7.39□□□□□ -1.23
RTN4-211ENST00000438462 ST8SIA3O43173 380 aa7.39□□□□□ -1.23
RTN4-211ENST00000438462 CREBL2O60519 120 aaPredicted RBP7.39□□□□□ -1.23
RTN4-211ENST00000438462 SERPINA2P20848 420 aa7.39□□□□□ -1.23
RTN4-211ENST00000438462 CBX3Q13185 183 aa7.39□□□□□ -1.23
RTN4-211ENST00000438462 SSX6Q7RTT6 188 aa7.39□□□□□ -1.23
RTN4-211ENST00000438462 SLC35F2Q8IXU6 374 aa7.39□□□□□ -1.23
RTN4-211ENST00000438462 MNS1Q8NEH6 495 aa7.39□□□□□ -1.23
RTN4-211ENST00000438462 MRPL30Q8TCC3 161 aaKnown RBP7.39□□□□□ -1.23
RTN4-211ENST00000438462 ST8SIA2Q92186 375 aa7.39□□□□□ -1.23
RTN4-211ENST00000438462 GPER1Q99527 375 aa7.39□□□□□ -1.23
RTN4-211ENST00000438462 K7EQG2 157 aa7.38□□□□□ -1.23
RTN4-211ENST00000438462 KRT8P05787 483 aa7.38□□□□□ -1.23
RTN4-211ENST00000438462 CD5P06127 495 aa7.38□□□□□ -1.23
RTN4-211ENST00000438462 IL6RP08887 468 aaPredicted RBP7.38□□□□□ -1.23
RTN4-211ENST00000438462 PTBP1P26599 531 aaKnown RBP eCLIP7.38□□□□□ -1.231e-7■■■■□ 26.1
RTN4-211ENST00000438462 FXYD7P58549 80 aa7.38□□□□□ -1.23
RTN4-211ENST00000438462 HMGN3Q15651 99 aa7.38□□□□□ -1.23
RTN4-211ENST00000438462 RAB12Q6IQ22 244 aa7.38□□□□□ -1.23
RTN4-211ENST00000438462 MMD2Q8IY49 270 aa7.38□□□□□ -1.23
RTN4-211ENST00000438462 OR51A4Q8NGJ6 313 aa7.38□□□□□ -1.23
RTN4-211ENST00000438462 OR13C3Q8NGS6 347 aa7.38□□□□□ -1.23
RTN4-211ENST00000438462 GRAMD2BQ96HH9 432 aa7.38□□□□□ -1.23
RTN4-211ENST00000438462 NEDD4LQ96PU5 975 aa7.38□□□□□ -1.23
RTN4-211ENST00000438462 RAB40CQ96S21 281 aa7.38□□□□□ -1.23
RTN4-211ENST00000438462 DPH3P1Q9H4G8 78 aa7.38□□□□□ -1.23
RTN4-211ENST00000438462 CMTM6Q9NX76 183 aa7.38□□□□□ -1.23
RTN4-211ENST00000438462 MSRB1Q9NZV6 116 aa7.38□□□□□ -1.23
RTN4-211ENST00000438462 TRAV26-1A0A087WT03 109 aa7.37□□□□□ -1.23
RTN4-211ENST00000438462 IGHV3-66A0A0C4DH42 116 aa7.37□□□□□ -1.23
RTN4-211ENST00000438462 A0A1W2PP11 408 aa7.37□□□□□ -1.23
RTN4-211ENST00000438462 LYRM9A8MSI8 78 aa7.37□□□□□ -1.23
RTN4-211ENST00000438462 ZNF670-ZNF695F2Z2N8 137 aa7.37□□□□□ -1.23
RTN4-211ENST00000438462 H3BN98 237 aa7.37□□□□□ -1.23
RTN4-211ENST00000438462 SC5DO75845 299 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms