RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 PTBP1P26599 531 aaKnown RBP eCLIP12.24□□□□□ -0.45
TREX1-201ENST00000433541 CX3CL1P78423 397 aa12.24□□□□□ -0.45
TREX1-201ENST00000433541 TNXAQ16473 311 aa12.24□□□□□ -0.45
TREX1-201ENST00000433541 TRIQKQ629K1 86 aa12.24□□□□□ -0.45
TREX1-201ENST00000433541 ZNF57Q68EA5 555 aaPredicted RBP12.24□□□□□ -0.45
TREX1-201ENST00000433541 VKORC1L1Q8N0U8 176 aa12.24□□□□□ -0.45
TREX1-201ENST00000433541 TERB2Q8NHR7 220 aa12.24□□□□□ -0.45
TREX1-201ENST00000433541 ZFAND1Q8TCF1 268 aa12.24□□□□□ -0.45
TREX1-201ENST00000433541 CD300LFQ8TDQ1 290 aa12.24□□□□□ -0.45
TREX1-201ENST00000433541 ARPC1AQ92747 370 aa12.24□□□□□ -0.45
TREX1-201ENST00000433541 PHB2Q99623 299 aa12.24□□□□□ -0.45
TREX1-201ENST00000433541 CITED2Q99967 270 aaPredicted RBP12.24□□□□□ -0.45
TREX1-201ENST00000433541 SOSTQ9BQB4 213 aa12.24□□□□□ -0.45
TREX1-201ENST00000433541 C14orf166Q9Y224 244 aaKnown RBP12.24□□□□□ -0.45
TREX1-201ENST00000433541 TRAV41A0A0B4J266 112 aa12.23□□□□□ -0.45
TREX1-201ENST00000433541 RAMP3O60896 148 aa12.23□□□□□ -0.45
TREX1-201ENST00000433541 IGLV2-23P01705 113 aa12.23□□□□□ -0.45
TREX1-201ENST00000433541 PI3P19957 117 aa12.23□□□□□ -0.45
TREX1-201ENST00000433541 UCP3P55916 312 aa12.23□□□□□ -0.45
TREX1-201ENST00000433541 UBE2KP61086 200 aa12.23□□□□□ -0.45
TREX1-201ENST00000433541 ERVK-16P61578 105 aa12.23□□□□□ -0.45
TREX1-201ENST00000433541 TMEM267Q0VDI3 215 aaPredicted RBP12.23□□□□□ -0.45
TREX1-201ENST00000433541 EIF4EBP1Q13541 118 aaPredicted RBP12.23□□□□□ -0.45
TREX1-201ENST00000433541 FXYD3Q14802 87 aa12.23□□□□□ -0.45
TREX1-201ENST00000433541 ZNF79Q15937 498 aa12.23□□□□□ -0.45
TREX1-201ENST00000433541 TMEM65Q6PI78 240 aa12.23□□□□□ -0.45
TREX1-201ENST00000433541 TBC1D26Q86UD7 250 aa12.23□□□□□ -0.45
TREX1-201ENST00000433541 TEX45Q8NA69 505 aa12.23□□□□□ -0.45
TREX1-201ENST00000433541 DMBX1Q8NFW5 382 aa12.23□□□□□ -0.45
TREX1-201ENST00000433541 VSTM2AQ8TAG5 236 aa12.23□□□□□ -0.45
TREX1-201ENST00000433541 MARCH1Q8TCQ1 289 aa12.23□□□□□ -0.45
TREX1-201ENST00000433541 PRRT1Q99946 306 aa12.23□□□□□ -0.45
TREX1-201ENST00000433541 AIFM2Q9BRQ8 373 aa12.23□□□□□ -0.45
TREX1-201ENST00000433541 FAM103A1Q9BTL3 118 aaKnown RBP12.23□□□□□ -0.45
TREX1-201ENST00000433541 RSRP1Q9BUV0 290 aa12.23□□□□□ -0.45
TREX1-201ENST00000433541 HRASLSQ9HDD0 168 aa12.23□□□□□ -0.45
TREX1-201ENST00000433541 BATF3Q9NR55 127 aa12.23□□□□□ -0.45
TREX1-201ENST00000433541 COPZ2Q9P299 210 aa12.23□□□□□ -0.45
TREX1-201ENST00000433541 SCP2D1Q9UJQ7 156 aa12.23□□□□□ -0.45
TREX1-201ENST00000433541 SRRM4A7MD48 611 aaKnown RBP12.22□□□□□ -0.45
TREX1-201ENST00000433541 G3V318 75 aa12.22□□□□□ -0.45
TREX1-201ENST00000433541 MPPED1O15442 326 aa12.22□□□□□ -0.45
TREX1-201ENST00000433541 RPA2P15927 270 aa12.22□□□□□ -0.45
TREX1-201ENST00000433541 ECI1P42126 302 aa12.22□□□□□ -0.45
TREX1-201ENST00000433541 PJVKQ0ZLH3 352 aa12.22□□□□□ -0.45
TREX1-201ENST00000433541 CNPY1Q3B7I2 92 aa12.22□□□□□ -0.45
TREX1-201ENST00000433541 CXorf66Q5JRM2 361 aaPredicted RBP12.22□□□□□ -0.45
TREX1-201ENST00000433541 TEX38Q6PEX7 206 aa12.22□□□□□ -0.45
TREX1-201ENST00000433541 UNQ5815/PRO19632Q6UWF5 114 aa12.22□□□□□ -0.45
TREX1-201ENST00000433541 ZNF562Q6V9R5 426 aa12.22□□□□□ -0.45
TREX1-201ENST00000433541 COMMD1Q8N668 190 aa12.22□□□□□ -0.45
TREX1-201ENST00000433541 CCDC71LQ8N9Z2 235 aa12.22□□□□□ -0.45
TREX1-201ENST00000433541 OR51S1Q8NGJ8 323 aa12.22□□□□□ -0.45
TREX1-201ENST00000433541 RHOVQ96L33 236 aa12.22□□□□□ -0.45
TREX1-201ENST00000433541 SLC2A9Q9NRM0 540 aa12.22□□□□□ -0.45
TREX1-201ENST00000433541 A0A1W2PN81 502 aa12.21□□□□□ -0.45
TREX1-201ENST00000433541 A6NHS1 94 aa12.21□□□□□ -0.45
TREX1-201ENST00000433541 NUDT19A8MXV4 375 aa12.21□□□□□ -0.45
TREX1-201ENST00000433541 RBFOX2O43251 390 aaKnown RBP eCLIP12.21□□□□□ -0.45
TREX1-201ENST00000433541 OR2A4O95047 310 aa12.21□□□□□ -0.45
TREX1-201ENST00000433541 S1PR2O95136 353 aa12.21□□□□□ -0.45
TREX1-201ENST00000433541 HPRT1P00492 218 aa12.21□□□□□ -0.45
TREX1-201ENST00000433541 IGF1P05019 195 aa12.21□□□□□ -0.45
TREX1-201ENST00000433541 PF4V1P10720 104 aa12.21□□□□□ -0.45
TREX1-201ENST00000433541 NQO2P16083 231 aa12.21□□□□□ -0.45
TREX1-201ENST00000433541 F2RP25116 425 aa12.21□□□□□ -0.45
TREX1-201ENST00000433541 CD40LGP29965 261 aa12.21□□□□□ -0.45
TREX1-201ENST00000433541 CHRNA7P36544 502 aa12.21□□□□□ -0.45
TREX1-201ENST00000433541 ETV6P41212 452 aa12.21□□□□□ -0.45
TREX1-201ENST00000433541 LPAR6P43657 344 aa12.21□□□□□ -0.45
TREX1-201ENST00000433541 PIGPP57054 158 aa12.21□□□□□ -0.45
TREX1-201ENST00000433541 NDPQ00604 133 aa12.21□□□□□ -0.45
TREX1-201ENST00000433541 LHFPL1Q86WI0 220 aa12.21□□□□□ -0.45
TREX1-201ENST00000433541 NDUFA11Q86Y39 141 aa12.21□□□□□ -0.45
TREX1-201ENST00000433541 OR13C8Q8NGS7 320 aa12.21□□□□□ -0.45
TREX1-201ENST00000433541 ZNF486Q96H40 463 aaPredicted RBP12.21□□□□□ -0.45
TREX1-201ENST00000433541 OR2A7Q96R45 310 aa12.21□□□□□ -0.45
TREX1-201ENST00000433541 SRRQ9GZT4 340 aa12.21□□□□□ -0.45
TREX1-201ENST00000433541 ZNF355PQ9NSJ1 428 aa12.21□□□□□ -0.45
TREX1-201ENST00000433541 TSSC4Q9Y5U2 329 aaPredicted RBP12.21□□□□□ -0.45
TREX1-201ENST00000433541 ANK2Q01484 3957 aa12.21□□□□□ -0.46
TREX1-201ENST00000433541 KBTBD11O94819 623 aa12.2□□□□□ -0.46
TREX1-201ENST00000433541 SERPINE2P07093 398 aa12.2□□□□□ -0.46
TREX1-201ENST00000433541 TAS2R31P59538 309 aa12.2□□□□□ -0.46
TREX1-201ENST00000433541 MMD2Q8IY49 270 aa12.2□□□□□ -0.46
TREX1-201ENST00000433541 TCTEX1D1Q8N7M0 179 aa12.2□□□□□ -0.46
TREX1-201ENST00000433541 GDPD1Q8N9F7 314 aa12.2□□□□□ -0.46
TREX1-201ENST00000433541 LFNGQ8NES3 379 aa12.2□□□□□ -0.46
TREX1-201ENST00000433541 FAM110DQ8TAY7 271 aaPredicted RBP12.2□□□□□ -0.46
TREX1-201ENST00000433541 TRIM63Q969Q1 353 aa12.2□□□□□ -0.46
TREX1-201ENST00000433541 R3HDM4Q96D70 268 aa12.2□□□□□ -0.46
TREX1-201ENST00000433541 ZNF430Q9H8G1 570 aaPredicted RBP12.2□□□□□ -0.46
TREX1-201ENST00000433541 COMMD9Q9P000 198 aa12.2□□□□□ -0.46
TREX1-201ENST00000433541 FBXO7Q9Y3I1 522 aa12.2□□□□□ -0.46
TREX1-201ENST00000433541 TNCP24821 2201 aa12.2□□□□□ -0.46
TREX1-201ENST00000433541 DNHD1Q96M86 4753 aa12.2□□□□□ -0.46
TREX1-201ENST00000433541 TEX13DA0A0J9YY54 714 aaPredicted RBP12.19□□□□□ -0.46
TREX1-201ENST00000433541 LINC00854A0A1B0GVQ3 168 aa12.19□□□□□ -0.46
TREX1-201ENST00000433541 ZNF735P0CB33 412 aa12.19□□□□□ -0.46
TREX1-201ENST00000433541 APELAP0DMC3 54 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms