RNA–Protein interactions for RNA: ENST00000433224.1

LRRTM1-206, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-206ENST00000433224 OR4S2Q8NH73 311 aa10.55□□□□□ -0.72
LRRTM1-206ENST00000433224 CTDSP1Q9GZU7 261 aa10.55□□□□□ -0.72
LRRTM1-206ENST00000433224 BARX1Q9HBU1 254 aaPredicted RBP10.55□□□□□ -0.72
LRRTM1-206ENST00000433224 ZDHHC8Q9ULC8 765 aa10.55□□□□□ -0.72
LRRTM1-206ENST00000433224 ZNF106Q9H2Y7 1883 aaKnown RBP10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 WDFY4Q6ZS81 3184 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 IGKV3D-15A0A087WSY6 115 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 ZNF503-AS2A6NEH8 195 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 RBP4P02753 201 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 CD5P06127 495 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 ANOS1P23352 680 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 SUB1P53999 127 aaKnown RBP eCLIP10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 STARD4Q96DR4 205 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 OR4C12Q96R67 309 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 GINS3Q9BRX5 216 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 CALYQ9NYX4 217 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 TUBD1Q9UJT1 453 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 INSIG2Q9Y5U4 225 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 NAV2Q8IVL1 2488 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 IGHV1-18A0A0C4DH31 117 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 S1PR2O95136 353 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 RAB4AP20338 218 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 CHRNB4P30926 498 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 GFI1BQ5VTD9 330 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 SLC35E3Q7Z769 313 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 MUC15Q8N387 334 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 PRSS33Q8NF86 280 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 VAMP8Q9BV40 100 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 MRPL37Q9BZE1 423 aaKnown RBP10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 RBKSQ9H477 322 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 ASCL3Q9NQ33 180 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 PAM16Q9Y3D7 125 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 DUXBA0A1W2PPF3 345 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 FCN1O00602 326 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 CA11O75493 328 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 TDGF1P13385 188 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 RAB7AP51149 207 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 VMA21Q3ZAQ7 101 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 SPNS3Q6ZMD2 512 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 TMEM147Q9BVK8 224 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 ZNF331Q9NQX6 463 aaPredicted RBP10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 FKBP11Q9NYL4 201 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 NAT8BQ9UHF3 227 aa10.54□□□□□ -0.72
LRRTM1-206ENST00000433224 IGHV3OR16-10A0A075B7F0 116 aa10.53□□□□□ -0.72
LRRTM1-206ENST00000433224 TRBV6-7A0A0A0MS04 114 aa10.53□□□□□ -0.72
LRRTM1-206ENST00000433224 C5orf52A6NGY3 159 aa10.53□□□□□ -0.72
LRRTM1-206ENST00000433224 ZNF25P17030 456 aaPredicted RBP10.53□□□□□ -0.72
LRRTM1-206ENST00000433224 RNF151Q2KHN1 245 aa10.53□□□□□ -0.72
LRRTM1-206ENST00000433224 CYB5R2Q6BCY4 276 aa10.53□□□□□ -0.72
LRRTM1-206ENST00000433224 SMDT1Q9H4I9 107 aa10.53□□□□□ -0.72
LRRTM1-206ENST00000433224 HES4Q9HCC6 221 aa10.53□□□□□ -0.72
LRRTM1-206ENST00000433224 SRP19P09132 144 aaKnown RBP10.53□□□□□ -0.72
LRRTM1-206ENST00000433224 ORM2P19652 201 aa10.53□□□□□ -0.72
LRRTM1-206ENST00000433224 CLCF1Q9UBD9 225 aa10.53□□□□□ -0.72
LRRTM1-206ENST00000433224 RNF115Q9Y4L5 304 aa10.53□□□□□ -0.72
LRRTM1-206ENST00000433224 A0A1B0GU03 582 aa10.53□□□□□ -0.72
LRRTM1-206ENST00000433224 HSBP1L1C9JCN9 74 aa10.53□□□□□ -0.72
LRRTM1-206ENST00000433224 NDUFA2O43678 99 aa10.53□□□□□ -0.72
LRRTM1-206ENST00000433224 NDUFS6O75380 124 aaKnown RBP10.53□□□□□ -0.72
LRRTM1-206ENST00000433224 LY6HO94772 140 aa10.53□□□□□ -0.72
LRRTM1-206ENST00000433224 MEF2BQ02080 365 aaPredicted RBP10.53□□□□□ -0.72
LRRTM1-206ENST00000433224 HIST3H3Q16695 136 aa10.53□□□□□ -0.72
LRRTM1-206ENST00000433224 MST1LQ2TV78 715 aa10.53□□□□□ -0.72
LRRTM1-206ENST00000433224 HSD17B10Q99714 261 aaKnown RBP10.53□□□□□ -0.72
LRRTM1-206ENST00000433224 TM2D1Q9BX74 207 aa10.53□□□□□ -0.72
LRRTM1-206ENST00000433224 HIVEP3Q5T1R4 2406 aa10.53□□□□□ -0.72
LRRTM1-206ENST00000433224 WNK1Q9H4A3 2382 aa10.52□□□□□ -0.72
LRRTM1-206ENST00000433224 SS18L1O75177 396 aaPredicted RBP10.52□□□□□ -0.72
LRRTM1-206ENST00000433224 TPPP2P59282 170 aa10.52□□□□□ -0.72
LRRTM1-206ENST00000433224 DPPA3Q6W0C5 159 aa10.52□□□□□ -0.72
LRRTM1-206ENST00000433224 ZNF600Q6ZNG1 722 aa10.52□□□□□ -0.72
LRRTM1-206ENST00000433224 TRAV24A0A0B4J272 114 aa10.52□□□□□ -0.73
LRRTM1-206ENST00000433224 ADH4P08319 380 aa10.52□□□□□ -0.73
LRRTM1-206ENST00000433224 CCL3L1P16619 93 aa10.52□□□□□ -0.73
LRRTM1-206ENST00000433224 CCL1P22362 96 aa10.52□□□□□ -0.73
LRRTM1-206ENST00000433224 PEAR1Q5VY43 1037 aaPredicted RBP10.52□□□□□ -0.73
LRRTM1-206ENST00000433224 HCP5Q6MZN7 132 aa10.52□□□□□ -0.73
LRRTM1-206ENST00000433224 ACP7Q6ZNF0 438 aa10.52□□□□□ -0.73
LRRTM1-206ENST00000433224 CMTM2Q8TAZ6 248 aa10.52□□□□□ -0.73
LRRTM1-206ENST00000433224 GALNT14Q96FL9 552 aa10.52□□□□□ -0.73
LRRTM1-206ENST00000433224 M0R143 59 aa10.52□□□□□ -0.73
LRRTM1-206ENST00000433224 UBE2CO00762 179 aa10.52□□□□□ -0.73
LRRTM1-206ENST00000433224 THBS3P49746 956 aa10.52□□□□□ -0.73
LRRTM1-206ENST00000433224 LINC00205P59089 165 aa10.52□□□□□ -0.73
LRRTM1-206ENST00000433224 DAZAP1Q96EP5 407 aaKnown RBP10.52□□□□□ -0.73
LRRTM1-206ENST00000433224 CRIM1Q9NZV1 1036 aa10.52□□□□□ -0.73
LRRTM1-206ENST00000433224 SLC35B1P78383 322 aa10.51□□□□□ -0.73
LRRTM1-206ENST00000433224 KLRB1Q12918 225 aa10.51□□□□□ -0.73
LRRTM1-206ENST00000433224 TBR1Q16650 682 aa10.51□□□□□ -0.73
LRRTM1-206ENST00000433224 RSPO1Q2MKA7 263 aaPredicted RBP10.51□□□□□ -0.73
LRRTM1-206ENST00000433224 LHFPL1Q86WI0 220 aa10.51□□□□□ -0.73
LRRTM1-206ENST00000433224 OR8B3Q8NGG8 313 aa10.51□□□□□ -0.73
LRRTM1-206ENST00000433224 SGMS2Q8NHU3 365 aa10.51□□□□□ -0.73
LRRTM1-206ENST00000433224 OR8B2Q96RD0 313 aa10.51□□□□□ -0.73
LRRTM1-206ENST00000433224 METRNQ9UJH8 293 aa10.51□□□□□ -0.73
LRRTM1-206ENST00000433224 TRANK1O15050 2925 aa10.51□□□□□ -0.73
LRRTM1-206ENST00000433224 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.51□□□□□ -0.73
LRRTM1-206ENST00000433224 OR10J4P0C629 311 aa10.51□□□□□ -0.73
LRRTM1-206ENST00000433224 HOXB1P14653 301 aaPredicted RBP10.51□□□□□ -0.73
LRRTM1-206ENST00000433224 HOXA5P20719 270 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms