RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 PPIHO43447 177 aaKnown RBP16■□□□□ 0.15
VRK2-205ENST00000432057 IFNA17P01571 189 aa16■□□□□ 0.15
VRK2-205ENST00000432057 IGHV2-70P01814 119 aa16■□□□□ 0.15
VRK2-205ENST00000432057 DEFA5Q01523 94 aa16■□□□□ 0.15
VRK2-205ENST00000432057 TMEM155Q4W5P6 130 aa16■□□□□ 0.15
VRK2-205ENST00000432057 AVPI1Q5T686 147 aa16■□□□□ 0.15
VRK2-205ENST00000432057 ZNF833PQ6ZTB9 187 aa16■□□□□ 0.15
VRK2-205ENST00000432057 SCGB1C1Q8TD33 95 aa16■□□□□ 0.15
VRK2-205ENST00000432057 UBE2L5PA0A1B0GUS4 154 aa15.99■□□□□ 0.15
VRK2-205ENST00000432057 PMS2P5A8MQ11 134 aa15.99■□□□□ 0.15
VRK2-205ENST00000432057 RNASEK-C17orf49H0YIS7 233 aa15.99■□□□□ 0.15
VRK2-205ENST00000432057 LY6HO94772 140 aa15.99■□□□□ 0.15
VRK2-205ENST00000432057 SNCAP37840 140 aa15.99■□□□□ 0.15
VRK2-205ENST00000432057 C4orf17Q53FE4 359 aa15.99■□□□□ 0.15
VRK2-205ENST00000432057 ATRAIDQ6UW56 229 aa15.99■□□□□ 0.15
VRK2-205ENST00000432057 CBLN4Q9NTU7 201 aa15.99■□□□□ 0.15
VRK2-205ENST00000432057 TMA7Q9Y2S6 64 aaKnown RBP15.99■□□□□ 0.15
VRK2-205ENST00000432057 LRRC75BQ2VPJ9 315 aa15.99■□□□□ 0.15
VRK2-205ENST00000432057 AKR1C8PQ5T2L2 129 aa15.99■□□□□ 0.15
VRK2-205ENST00000432057 OR4A47Q6IF82 309 aa15.99■□□□□ 0.15
VRK2-205ENST00000432057 C11orf71Q6IPW1 123 aa15.99■□□□□ 0.15
VRK2-205ENST00000432057 RHOVQ96L33 236 aa15.99■□□□□ 0.15
VRK2-205ENST00000432057 MRPL20Q9BYC9 149 aaKnown RBP15.99■□□□□ 0.15
VRK2-205ENST00000432057 SLC35D1Q9NTN3 355 aa15.99■□□□□ 0.15
VRK2-205ENST00000432057 F8W036 122 aa15.98■□□□□ 0.15
VRK2-205ENST00000432057 CD5P06127 495 aa15.98■□□□□ 0.15
VRK2-205ENST00000432057 SOD3P08294 240 aa15.98■□□□□ 0.15
VRK2-205ENST00000432057 SPCS3P61009 180 aa15.98■□□□□ 0.15
VRK2-205ENST00000432057 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.98■□□□□ 0.15
VRK2-205ENST00000432057 ITLN2Q8WWU7 325 aaPredicted RBP15.98■□□□□ 0.15
VRK2-205ENST00000432057 TAGLNQ01995 201 aaKnown RBP15.97■□□□□ 0.15
VRK2-205ENST00000432057 RAB39BQ96DA2 213 aa15.97■□□□□ 0.15
VRK2-205ENST00000432057 WDR61Q9GZS3 305 aaKnown RBP15.97■□□□□ 0.15
VRK2-205ENST00000432057 RAB1BQ9H0U4 201 aa15.97■□□□□ 0.15
VRK2-205ENST00000432057 C15orf61A6NNL5 157 aa15.97■□□□□ 0.15
VRK2-205ENST00000432057 C15orf62A8K5M9 175 aa15.97■□□□□ 0.15
VRK2-205ENST00000432057 C9JQL5 133 aa15.97■□□□□ 0.15
VRK2-205ENST00000432057 DVL1P1P54792 670 aaPredicted RBP15.97■□□□□ 0.15
VRK2-205ENST00000432057 RTL8BQ17RB0 113 aa15.97■□□□□ 0.15
VRK2-205ENST00000432057 ZNF841Q6ZN19 808 aa15.97■□□□□ 0.15
VRK2-205ENST00000432057 COMMD1Q8N668 190 aa15.97■□□□□ 0.15
VRK2-205ENST00000432057 OR52E5Q8NH55 327 aa15.97■□□□□ 0.15
VRK2-205ENST00000432057 PARD6GQ9BYG4 376 aaPredicted RBP15.97■□□□□ 0.15
VRK2-205ENST00000432057 TRBV23-1A0A0A0MS06 115 aa15.96■□□□□ 0.15
VRK2-205ENST00000432057 J3QR06 171 aa15.96■□□□□ 0.15
VRK2-205ENST00000432057 GPR37O15354 613 aa15.96■□□□□ 0.15
VRK2-205ENST00000432057 IGKV1-16P04430 117 aa15.96■□□□□ 0.15
VRK2-205ENST00000432057 ARG1P05089 322 aa15.96■□□□□ 0.15
VRK2-205ENST00000432057 REG1BP48304 166 aa15.96■□□□□ 0.15
VRK2-205ENST00000432057 GUCA2BQ16661 112 aa15.96■□□□□ 0.15
VRK2-205ENST00000432057 GUK1Q16774 197 aa15.96■□□□□ 0.15
VRK2-205ENST00000432057 C10orf91Q5T1B1 145 aa15.96■□□□□ 0.15
VRK2-205ENST00000432057 OR13D1Q8NGV5 346 aa15.96■□□□□ 0.15
VRK2-205ENST00000432057 OR10X1Q8NGY0 326 aa15.96■□□□□ 0.15
VRK2-205ENST00000432057 SCRT1Q9BWW7 348 aa15.96■□□□□ 0.15
VRK2-205ENST00000432057 RALYQ9UKM9 306 aaKnown RBP15.96■□□□□ 0.15
VRK2-205ENST00000432057 A0A1W2PPR1 153 aa15.95■□□□□ 0.14
VRK2-205ENST00000432057 FAM157AC9JC47 383 aa15.95■□□□□ 0.14
VRK2-205ENST00000432057 F12P00748 615 aaPredicted RBP15.95■□□□□ 0.14
VRK2-205ENST00000432057 HRASP01112 189 aa15.95■□□□□ 0.14
VRK2-205ENST00000432057 SFTA3P0C7M3 94 aa15.95■□□□□ 0.14
VRK2-205ENST00000432057 OR8U8P0C7N1 319 aa15.95■□□□□ 0.14
VRK2-205ENST00000432057 IGHV1-8P0DP01 117 aa15.95■□□□□ 0.14
VRK2-205ENST00000432057 BTN1A1Q13410 526 aa15.95■□□□□ 0.14
VRK2-205ENST00000432057 POU2AF1Q16633 256 aa15.95■□□□□ 0.14
VRK2-205ENST00000432057 SPSB3Q6PJ21 355 aa15.95■□□□□ 0.14
VRK2-205ENST00000432057 ZNF429Q86V71 674 aa15.95■□□□□ 0.14
VRK2-205ENST00000432057 OR10P1Q8NGE3 313 aa15.95■□□□□ 0.14
VRK2-205ENST00000432057 ZNF596Q8TC21 504 aa15.95■□□□□ 0.14
VRK2-205ENST00000432057 TAF15Q92804 592 aaKnown RBP eCLIP15.95■□□□□ 0.14
VRK2-205ENST00000432057 PSMG3Q9BT73 122 aaPredicted RBP15.95■□□□□ 0.14
VRK2-205ENST00000432057 TMEM147Q9BVK8 224 aa15.95■□□□□ 0.14
VRK2-205ENST00000432057 TCF19Q9Y242 345 aa15.95■□□□□ 0.14
VRK2-205ENST00000432057 FSTL3O95633 263 aa15.95■□□□□ 0.14
VRK2-205ENST00000432057 VDAC2P45880 294 aaPredicted RBP15.95■□□□□ 0.14
VRK2-205ENST00000432057 DIAPH2-AS1Q14236 149 aa15.95■□□□□ 0.14
VRK2-205ENST00000432057 PDLIM3Q53GG5 364 aaPredicted RBP15.95■□□□□ 0.14
VRK2-205ENST00000432057 DHRS7BQ6IAN0 325 aaPredicted RBP15.95■□□□□ 0.14
VRK2-205ENST00000432057 C11orf42Q8N5U0 333 aa15.95■□□□□ 0.14
VRK2-205ENST00000432057 LINC00311Q8N616 119 aa15.95■□□□□ 0.14
VRK2-205ENST00000432057 CLCC1Q96S66 551 aa15.95■□□□□ 0.14
VRK2-205ENST00000432057 VSIRQ9H7M9 311 aa15.95■□□□□ 0.14
VRK2-205ENST00000432057 HEYLQ9NQ87 328 aaPredicted RBP15.95■□□□□ 0.14
VRK2-205ENST00000432057 CARHSP1Q9Y2V2 147 aaKnown RBP15.95■□□□□ 0.14
VRK2-205ENST00000432057 H2AFB1P0C5Y9 115 aa15.94■□□□□ 0.14
VRK2-205ENST00000432057 MYOD1P15172 320 aa15.94■□□□□ 0.14
VRK2-205ENST00000432057 CCL20P78556 96 aa15.94■□□□□ 0.14
VRK2-205ENST00000432057 HNF4GQ14541 408 aa15.94■□□□□ 0.14
VRK2-205ENST00000432057 ATP6V1FQ16864 119 aa15.94■□□□□ 0.14
VRK2-205ENST00000432057 C8orf31Q8N9H6 132 aa15.94■□□□□ 0.14
VRK2-205ENST00000432057 SUN5Q8TC36 379 aa15.94■□□□□ 0.14
VRK2-205ENST00000432057 PINX1Q96BK5 328 aaKnown RBP15.94■□□□□ 0.14
VRK2-205ENST00000432057 SEC11CQ9BY50 192 aa15.94■□□□□ 0.14
VRK2-205ENST00000432057 FOXA2Q9Y261 457 aaPredicted RBP15.94■□□□□ 0.14
VRK2-205ENST00000432057 MALRD1Q5VYJ5 2156 aa15.94■□□□□ 0.14
VRK2-205ENST00000432057 A0A087X0M5 115 aa15.93■□□□□ 0.14
VRK2-205ENST00000432057 A0A1B0GX30 115 aa15.93■□□□□ 0.14
VRK2-205ENST00000432057 SRRM4A7MD48 611 aaKnown RBP15.93■□□□□ 0.14
VRK2-205ENST00000432057 APOA2P02652 100 aa15.93■□□□□ 0.14
VRK2-205ENST00000432057 HOXA1P49639 335 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms