RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 TMEM187Q14656 261 aa3.66□□□□□ -1.82
UBE4A-202ENST00000431736 TMEM41BQ5BJD5 291 aa3.66□□□□□ -1.82
UBE4A-202ENST00000431736 TMEM42Q69YG0 159 aa3.66□□□□□ -1.82
UBE4A-202ENST00000431736 C22orf42Q6IC83 251 aa3.66□□□□□ -1.82
UBE4A-202ENST00000431736 C5orf56Q8N8D9 126 aa3.66□□□□□ -1.82
UBE4A-202ENST00000431736 LSM10Q969L4 123 aaKnown RBP3.66□□□□□ -1.82
UBE4A-202ENST00000431736 BATF3Q9NR55 127 aa3.66□□□□□ -1.82
UBE4A-202ENST00000431736 OR2W1Q9Y3N9 320 aa3.66□□□□□ -1.82
UBE4A-202ENST00000431736 SAA2-SAA4A0A096LPE2 208 aa3.65□□□□□ -1.82
UBE4A-202ENST00000431736 M0QYG6 137 aa3.65□□□□□ -1.82
UBE4A-202ENST00000431736 SAA2P0DJI9 122 aaPredicted RBP3.65□□□□□ -1.82
UBE4A-202ENST00000431736 FSTP19883 344 aa3.65□□□□□ -1.82
UBE4A-202ENST00000431736 MORN2Q502X0 79 aa3.65□□□□□ -1.82
UBE4A-202ENST00000431736 ZNF562Q6V9R5 426 aa3.65□□□□□ -1.82
UBE4A-202ENST00000431736 C11orf42Q8N5U0 333 aa3.65□□□□□ -1.82
UBE4A-202ENST00000431736 SLC25A46Q96AG3 418 aa3.65□□□□□ -1.82
UBE4A-202ENST00000431736 C21orf62Q9NYP8 219 aa3.65□□□□□ -1.82
UBE4A-202ENST00000431736 AK3Q9UIJ7 227 aa3.65□□□□□ -1.82
UBE4A-202ENST00000431736 SOX21Q9Y651 276 aaPredicted RBP3.65□□□□□ -1.82
UBE4A-202ENST00000431736 TMEM238LA0A1B0GVL6 79 aa3.65□□□□□ -1.82
UBE4A-202ENST00000431736 TNFSF12O43508 249 aa3.65□□□□□ -1.82
UBE4A-202ENST00000431736 PAX6P26367 422 aa3.65□□□□□ -1.82
UBE4A-202ENST00000431736 LPAR6P43657 344 aa3.65□□□□□ -1.82
UBE4A-202ENST00000431736 TM4SF20Q53R12 229 aa3.65□□□□□ -1.82
UBE4A-202ENST00000431736 CGB2Q6NT52 195 aa3.65□□□□□ -1.82
UBE4A-202ENST00000431736 PRSS48Q7RTY5 328 aa3.65□□□□□ -1.82
UBE4A-202ENST00000431736 TMED4Q7Z7H5 227 aa3.65□□□□□ -1.82
UBE4A-202ENST00000431736 ZNF645Q8N7E2 425 aa3.65□□□□□ -1.82
UBE4A-202ENST00000431736 C8orf31Q8N9H6 132 aa3.65□□□□□ -1.82
UBE4A-202ENST00000431736 OR9G4Q8NGQ1 327 aa3.65□□□□□ -1.82
UBE4A-202ENST00000431736 ARHGAP5-AS1Q96IT6 56 aa3.65□□□□□ -1.82
UBE4A-202ENST00000431736 C11orf54Q9H0W9 315 aaPredicted RBP3.65□□□□□ -1.82
UBE4A-202ENST00000431736 C5orf42Q9H799 3197 aa3.65□□□□□ -1.82
UBE4A-202ENST00000431736 FABP12A6NFH5 140 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 TSC22D2O75157 780 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 ZNF737O75373 536 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 PSKH1P11801 424 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 HIST1H1DP16402 221 aaKnown RBP3.65□□□□□ -1.83
UBE4A-202ENST00000431736 DTYMKP23919 212 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 PSG5Q15238 335 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 FAM76BQ5HYJ3 339 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 C1orf229Q6ZS94 237 aaPredicted RBP3.65□□□□□ -1.83
UBE4A-202ENST00000431736 ZNF446Q9NWS9 450 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 PTBP1P26599 531 aaKnown RBP eCLIP3.65□□□□□ -1.831e-8■■□□□ 14.1
UBE4A-202ENST00000431736 CSN1S1P47710 185 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 PPP5CP53041 499 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 DLX6P56179 175 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 GNMTQ14749 295 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 WDR86Q86TI4 376 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 LAX1Q8IWV1 398 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 C12orf45Q8N5I9 185 aaPredicted RBP3.65□□□□□ -1.83
UBE4A-202ENST00000431736 PLPPR1Q8TBJ4 325 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 PIFOQ8TCI5 191 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 RHOVQ96L33 236 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 ISG20L2Q9H9L3 353 aaKnown RBP3.65□□□□□ -1.83
UBE4A-202ENST00000431736 A0A1B0GTI1 187 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 TMEM127O75204 238 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 HBE1P02100 147 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 HLA-GP17693 338 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 TSPOP30536 169 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 CLDN12P56749 244 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 MRPS10P82664 201 aaKnown RBP3.65□□□□□ -1.83
UBE4A-202ENST00000431736 C2orf76Q3KRA6 126 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 AKIRIN2Q53H80 203 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 TCTEX1D4Q5JR98 221 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 ZNF497Q6ZNH5 498 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 FGFRL1Q8N441 504 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 OR2C3Q8N628 320 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 OR5B3Q8NH48 314 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 FBXO7Q9Y3I1 522 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 OR51B2Q9Y5P1 312 aa3.65□□□□□ -1.83
UBE4A-202ENST00000431736 XRCC3O43542 346 aa3.64□□□□□ -1.83
UBE4A-202ENST00000431736 KRASP01116 189 aa3.64□□□□□ -1.83
UBE4A-202ENST00000431736 SLURP1P55000 103 aa3.64□□□□□ -1.83
UBE4A-202ENST00000431736 DHRS2Q13268 280 aa3.64□□□□□ -1.83
UBE4A-202ENST00000431736 RPL39P5Q59GN2 51 aa3.64□□□□□ -1.83
UBE4A-202ENST00000431736 CIB3Q96Q77 187 aaPredicted RBP3.64□□□□□ -1.83
UBE4A-202ENST00000431736 PRRT1Q99946 306 aa3.64□□□□□ -1.83
UBE4A-202ENST00000431736 ARFGEF3Q5TH69 2177 aa3.64□□□□□ -1.83
UBE4A-202ENST00000431736 TRAV25A0A0B4J276 109 aa3.64□□□□□ -1.83
UBE4A-202ENST00000431736 A0A0B4J293 547 aa3.64□□□□□ -1.83
UBE4A-202ENST00000431736 FSHBP01225 129 aa3.64□□□□□ -1.83
UBE4A-202ENST00000431736 AMY2AP04746 511 aa3.64□□□□□ -1.83
UBE4A-202ENST00000431736 RCC1P18754 421 aaPredicted RBP3.64□□□□□ -1.83
UBE4A-202ENST00000431736 RPL5P46777 297 aaKnown RBP3.64□□□□□ -1.83
UBE4A-202ENST00000431736 ETV1P50549 477 aa3.64□□□□□ -1.83
UBE4A-202ENST00000431736 DHODHQ02127 395 aa3.64□□□□□ -1.83
UBE4A-202ENST00000431736 ARL16Q0P5N6 197 aa3.64□□□□□ -1.83
UBE4A-202ENST00000431736 CFAP161Q6P656 301 aa3.64□□□□□ -1.83
UBE4A-202ENST00000431736 OR4B1Q8NGF8 309 aa3.64□□□□□ -1.83
UBE4A-202ENST00000431736 TAF15Q92804 592 aaKnown RBP eCLIP3.64□□□□□ -1.83
UBE4A-202ENST00000431736 ACY3Q96HD9 319 aa3.64□□□□□ -1.83
UBE4A-202ENST00000431736 NABP2Q9BQ15 211 aa3.64□□□□□ -1.83
UBE4A-202ENST00000431736 RCC2Q9P258 522 aaKnown RBP3.64□□□□□ -1.83
UBE4A-202ENST00000431736 TET2Q6N021 2002 aaPredicted RBP3.64□□□□□ -1.83
UBE4A-202ENST00000431736 SMIM30A4D0T7 59 aa3.64□□□□□ -1.83
UBE4A-202ENST00000431736 ODF3BA8MYP8 253 aa3.64□□□□□ -1.83
UBE4A-202ENST00000431736 NFYAP23511 347 aaPredicted RBP3.64□□□□□ -1.83
UBE4A-202ENST00000431736 CHATP28329 748 aa3.64□□□□□ -1.83
UBE4A-202ENST00000431736 TAS2R31P59538 309 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms