RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 GAL3ST2Q9H3Q3 398 aa10.58□□□□□ -0.72
DDX56-204ENST00000431640 SAP30LQ9HAJ7 183 aa10.58□□□□□ -0.72
DDX56-204ENST00000431640 PPIAL4AQ9Y536 164 aa10.58□□□□□ -0.72
DDX56-204ENST00000431640 LINC00312Q9Y6C7 94 aa10.58□□□□□ -0.72
DDX56-204ENST00000431640 PMS2P5A8MQ11 134 aa10.57□□□□□ -0.72
DDX56-204ENST00000431640 IFNA17P01571 189 aa10.57□□□□□ -0.72
DDX56-204ENST00000431640 CCL20P78556 96 aa10.57□□□□□ -0.72
DDX56-204ENST00000431640 MRPS11P82912 194 aaKnown RBP10.57□□□□□ -0.72
DDX56-204ENST00000431640 PMS2P11Q13670 270 aa10.57□□□□□ -0.72
DDX56-204ENST00000431640 RPL39P5Q59GN2 51 aa10.57□□□□□ -0.72
DDX56-204ENST00000431640 ZNF506Q5JVG8 444 aa10.57□□□□□ -0.72
DDX56-204ENST00000431640 TMEM88Q6PEY1 159 aa10.57□□□□□ -0.72
DDX56-204ENST00000431640 DDB2Q92466 427 aa10.57□□□□□ -0.72
DDX56-204ENST00000431640 RSG1Q9BU20 258 aa10.57□□□□□ -0.72
DDX56-204ENST00000431640 TUBA4BQ9H853 241 aa10.57□□□□□ -0.72
DDX56-204ENST00000431640 RPRMQ9NS64 109 aa10.57□□□□□ -0.72
DDX56-204ENST00000431640 DYSFO75923 2080 aa10.57□□□□□ -0.72
DDX56-204ENST00000431640 HRNRQ86YZ3 2850 aaPredicted RBP10.57□□□□□ -0.72
DDX56-204ENST00000431640 A0A1B0GV50 99 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 TMEM178BH3BS89 294 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 TMPRSS2O15393 492 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 SIAH2O43255 324 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 HRASP01112 189 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 OR9G9P0C7N8 305 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 PLA2G2AP14555 144 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 NDUFB7P17568 137 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 APOBEC3AP31941 199 aaPredicted RBP10.56□□□□□ -0.72
DDX56-204ENST00000431640 LINC00205P59089 165 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 RHEBQ15382 184 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 VWC2Q2TAL6 325 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 ZNF429Q86V71 674 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 ZNF709Q8N972 641 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 ZNF439Q8NDP4 499 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 OR10G4Q8NGN3 311 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 RAB39BQ96DA2 213 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 PLPPR2Q96GM1 343 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 ZNF251Q9BRH9 671 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 GGACTQ9BVM4 153 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 QTRT1Q9BXR0 403 aaKnown RBP10.56□□□□□ -0.72
DDX56-204ENST00000431640 SLC25A10Q9UBX3 287 aaPredicted RBP10.56□□□□□ -0.72
DDX56-204ENST00000431640 RPUSD1Q9UJJ7 312 aaKnown RBP10.56□□□□□ -0.72
DDX56-204ENST00000431640 UBE2L5PA0A1B0GUS4 154 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 B9A039 149 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 C17orf112F2Z3M2 114 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 NDUFA2O43678 99 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 SELLP14151 372 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 DAOP14920 347 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 NFYBP25208 207 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 PAX6P26367 422 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 ADAM5Q6NVV9 412 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 SLC25A48Q6ZT89 311 aaKnown RBP10.56□□□□□ -0.72
DDX56-204ENST00000431640 CBLN2Q8IUK8 224 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 LYG1Q8N1E2 194 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 FAM216BQ8N7L0 139 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 C15orf54Q8N8G6 183 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 CLDND2Q8NHS1 167 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 LINC01560Q8TB33 94 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 RARRES2Q99969 163 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 RPS10P5Q9NQ39 176 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 TMEM106BQ9NUM4 274 aa10.56□□□□□ -0.72
DDX56-204ENST00000431640 MYO18BQ8IUG5 2567 aa10.55□□□□□ -0.72
DDX56-204ENST00000431640 UTP20O75691 2785 aaKnown RBP10.55□□□□□ -0.72
DDX56-204ENST00000431640 DOPEY1Q5JWR5 2465 aa10.55□□□□□ -0.72
DDX56-204ENST00000431640 SAA2-SAA4A0A096LPE2 208 aa10.55□□□□□ -0.72
DDX56-204ENST00000431640 SHISA9B4DS77 424 aa10.55□□□□□ -0.72
DDX56-204ENST00000431640 M0R036 132 aa10.55□□□□□ -0.72
DDX56-204ENST00000431640 SLC31A2O15432 143 aa10.55□□□□□ -0.72
DDX56-204ENST00000431640 NDUFB3O43676 98 aa10.55□□□□□ -0.72
DDX56-204ENST00000431640 IFNA1P01562 189 aa10.55□□□□□ -0.72
DDX56-204ENST00000431640 CD3EP07766 207 aa10.55□□□□□ -0.72
DDX56-204ENST00000431640 SRP19P09132 144 aaKnown RBP10.55□□□□□ -0.72
DDX56-204ENST00000431640 SAA2P0DJI9 122 aaPredicted RBP10.55□□□□□ -0.72
DDX56-204ENST00000431640 OR13C7P0DN81 318 aa10.55□□□□□ -0.72
DDX56-204ENST00000431640 AGAP20933 346 aa10.55□□□□□ -0.72
DDX56-204ENST00000431640 TAGLN2P37802 199 aaKnown RBP10.55□□□□□ -0.72
DDX56-204ENST00000431640 RELBQ01201 579 aa10.55□□□□□ -0.72
DDX56-204ENST00000431640 EFNB3Q15768 340 aa10.55□□□□□ -0.72
DDX56-204ENST00000431640 HAGHQ16775 308 aa10.55□□□□□ -0.72
DDX56-204ENST00000431640 ZNF787Q6DD87 383 aa10.55□□□□□ -0.72
DDX56-204ENST00000431640 FAM122CQ6P4D5 195 aa10.55□□□□□ -0.72
DDX56-204ENST00000431640 ZDHHC16Q969W1 377 aa10.55□□□□□ -0.72
DDX56-204ENST00000431640 DYNLRB1Q9NP97 96 aa10.55□□□□□ -0.72
DDX56-204ENST00000431640 SLC39A9Q9NUM3 307 aa10.55□□□□□ -0.72
DDX56-204ENST00000431640 CISD1Q9NZ45 108 aaKnown RBP10.55□□□□□ -0.72
DDX56-204ENST00000431640 DSCAMO60469 2012 aa10.55□□□□□ -0.72
DDX56-204ENST00000431640 C7orf77A4D0Y5 90 aa10.54□□□□□ -0.72
DDX56-204ENST00000431640 E7EQL1 145 aa10.54□□□□□ -0.72
DDX56-204ENST00000431640 MPDU1O75352 247 aa10.54□□□□□ -0.72
DDX56-204ENST00000431640 RAB11AP62491 216 aa10.54□□□□□ -0.72
DDX56-204ENST00000431640 RPL31P62899 125 aaKnown RBP10.54□□□□□ -0.72
DDX56-204ENST00000431640 FLI1Q01543 452 aaPredicted RBP10.54□□□□□ -0.72
DDX56-204ENST00000431640 ICAM4Q14773 271 aa10.54□□□□□ -0.72
DDX56-204ENST00000431640 POU2AF1Q16633 256 aa10.54□□□□□ -0.72
DDX56-204ENST00000431640 LRRC10Q5BKY1 277 aa10.54□□□□□ -0.72
DDX56-204ENST00000431640 DUX4L9Q6RFH8 374 aaPredicted RBP10.54□□□□□ -0.72
DDX56-204ENST00000431640 RBMS3Q6XE24 437 aaKnown RBP10.54□□□□□ -0.72
DDX56-204ENST00000431640 SSX9Q7RTT3 188 aa10.54□□□□□ -0.72
DDX56-204ENST00000431640 TCF23Q7RTU1 214 aa10.54□□□□□ -0.72
DDX56-204ENST00000431640 P2RX4Q99571 388 aa10.54□□□□□ -0.72
DDX56-204ENST00000431640 HEYLQ9NQ87 328 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms