RNA–Protein interactions for RNA: ENST00000431533.6

RPL28-204, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-204ENST00000431533 SCOCQ9UIL1 159 aa11.88□□□□□ -0.51
RPL28-204ENST00000431533 MRPS7Q9Y2R9 242 aaKnown RBP11.88□□□□□ -0.51
RPL28-204ENST00000431533 PRELID3BQ9Y3B1 194 aa11.88□□□□□ -0.51
RPL28-204ENST00000431533 TNFSF12O43508 249 aa11.87□□□□□ -0.51
RPL28-204ENST00000431533 SLC22A5O76082 557 aa11.87□□□□□ -0.51
RPL28-204ENST00000431533 SMIM18P0DKX4 95 aa11.87□□□□□ -0.51
RPL28-204ENST00000431533 CBX5P45973 191 aa11.87□□□□□ -0.51
RPL28-204ENST00000431533 FHL3Q13643 280 aa11.87□□□□□ -0.51
RPL28-204ENST00000431533 ASPHD1Q5U4P2 390 aa11.87□□□□□ -0.51
RPL28-204ENST00000431533 OSR1Q8TAX0 266 aaPredicted RBP11.87□□□□□ -0.51
RPL28-204ENST00000431533 SNAPC3Q92966 411 aa11.87□□□□□ -0.51
RPL28-204ENST00000431533 SLC25A46Q96AG3 418 aa11.87□□□□□ -0.51
RPL28-204ENST00000431533 ZMAT4Q9H898 229 aa11.87□□□□□ -0.51
RPL28-204ENST00000431533 PALMDQ9NP74 551 aa11.87□□□□□ -0.51
RPL28-204ENST00000431533 CCL28Q9NRJ3 127 aa11.87□□□□□ -0.51
RPL28-204ENST00000431533 DNAH9Q9NYC9 4486 aa11.87□□□□□ -0.51
RPL28-204ENST00000431533 PPYP01298 95 aa11.86□□□□□ -0.51
RPL28-204ENST00000431533 IGLV2-14P01704 120 aa11.86□□□□□ -0.51
RPL28-204ENST00000431533 EIF4EP06730 217 aaKnown RBP11.86□□□□□ -0.51
RPL28-204ENST00000431533 SLURP1P55000 103 aa11.86□□□□□ -0.51
RPL28-204ENST00000431533 UBE2KP61086 200 aa11.86□□□□□ -0.51
RPL28-204ENST00000431533 RUNX1Q01196 453 aa11.86□□□□□ -0.51
RPL28-204ENST00000431533 CASC10Q5T4H9 136 aa11.86□□□□□ -0.51
RPL28-204ENST00000431533 TEX45Q8NA69 505 aa11.86□□□□□ -0.51
RPL28-204ENST00000431533 POC5Q8NA72 575 aa11.86□□□□□ -0.51
RPL28-204ENST00000431533 SLC5A7Q9GZV3 580 aa11.86□□□□□ -0.51
RPL28-204ENST00000431533 NAA50Q9GZZ1 169 aaKnown RBP11.86□□□□□ -0.51
RPL28-204ENST00000431533 COA4Q9NYJ1 87 aa11.86□□□□□ -0.51
RPL28-204ENST00000431533 IGHV4OR15-8A0A075B7B6 117 aa11.85□□□□□ -0.51
RPL28-204ENST00000431533 A0A087WW49 117 aa11.85□□□□□ -0.51
RPL28-204ENST00000431533 MPPED1O15442 326 aa11.85□□□□□ -0.51
RPL28-204ENST00000431533 LGALS1P09382 135 aaKnown RBP11.85□□□□□ -0.51
RPL28-204ENST00000431533 SAA1P0DJI8 122 aaPredicted RBP11.85□□□□□ -0.51
RPL28-204ENST00000431533 DEFA5Q01523 94 aa11.85□□□□□ -0.51
RPL28-204ENST00000431533 CDK10Q15131 360 aa11.85□□□□□ -0.51
RPL28-204ENST00000431533 PRSS8Q16651 343 aa11.85□□□□□ -0.51
RPL28-204ENST00000431533 TMEM17Q86X19 198 aa11.85□□□□□ -0.51
RPL28-204ENST00000431533 VKORC1L1Q8N0U8 176 aa11.85□□□□□ -0.51
RPL28-204ENST00000431533 MFSD4AQ8N468 514 aa11.85□□□□□ -0.51
RPL28-204ENST00000431533 OR5AP2Q8NGF4 316 aa11.85□□□□□ -0.51
RPL28-204ENST00000431533 OR4S2Q8NH73 311 aa11.85□□□□□ -0.51
RPL28-204ENST00000431533 DCUN1D4Q92564 292 aa11.85□□□□□ -0.51
RPL28-204ENST00000431533 RCHY1Q96PM5 261 aa11.85□□□□□ -0.51
RPL28-204ENST00000431533 HSD17B10Q99714 261 aaKnown RBP11.85□□□□□ -0.51
RPL28-204ENST00000431533 SLA2Q9H6Q3 261 aa11.85□□□□□ -0.51
RPL28-204ENST00000431533 EHFQ9NZC4 300 aa11.85□□□□□ -0.51
RPL28-204ENST00000431533 MSGN1A6NI15 193 aa11.84□□□□□ -0.51
RPL28-204ENST00000431533 LINC01619G3V211 115 aa11.84□□□□□ -0.51
RPL28-204ENST00000431533 ACTL6BO94805 426 aa11.84□□□□□ -0.51
RPL28-204ENST00000431533 LYL1P12980 280 aa11.84□□□□□ -0.51
RPL28-204ENST00000431533 HERV-K104P61576 105 aa11.84□□□□□ -0.51
RPL28-204ENST00000431533 MRGPRG-AS1Q2M3A8 158 aa11.84□□□□□ -0.51
RPL28-204ENST00000431533 C10orf55Q5SWW7 151 aa11.84□□□□□ -0.51
RPL28-204ENST00000431533 OVCH2Q7RTZ1 564 aa11.84□□□□□ -0.51
RPL28-204ENST00000431533 SRSF12Q8WXF0 261 aaKnown RBP11.84□□□□□ -0.51
RPL28-204ENST00000431533 KCTD12Q96CX2 325 aaKnown RBP11.84□□□□□ -0.51
RPL28-204ENST00000431533 ZNF430Q9H8G1 570 aaPredicted RBP11.84□□□□□ -0.51
RPL28-204ENST00000431533 SORL1Q92673 2214 aa11.84□□□□□ -0.51
RPL28-204ENST00000431533 RYR3Q15413 4870 aa11.84□□□□□ -0.51
RPL28-204ENST00000431533 STAB2Q8WWQ8 2551 aa11.83□□□□□ -0.52
RPL28-204ENST00000431533 C13orf42A0A1B0GVH6 325 aa11.83□□□□□ -0.52
RPL28-204ENST00000431533 OVOL1O14753 267 aa11.83□□□□□ -0.52
RPL28-204ENST00000431533 HPGDSO60760 199 aa11.83□□□□□ -0.52
RPL28-204ENST00000431533 PMP2P02689 132 aa11.83□□□□□ -0.52
RPL28-204ENST00000431533 PRSS3P35030 304 aa11.83□□□□□ -0.52
RPL28-204ENST00000431533 GPR107Q5VW38 600 aa11.83□□□□□ -0.52
RPL28-204ENST00000431533 ZNF66Q6ZN08 573 aa11.83□□□□□ -0.52
RPL28-204ENST00000431533 SSX9Q7RTT3 188 aa11.83□□□□□ -0.52
RPL28-204ENST00000431533 SNX29P2Q8IUI4 249 aa11.83□□□□□ -0.52
RPL28-204ENST00000431533 MMD2Q8IY49 270 aa11.83□□□□□ -0.52
RPL28-204ENST00000431533 DLX4Q92988 240 aaPredicted RBP11.83□□□□□ -0.52
RPL28-204ENST00000431533 SMIM31A0A1B0GVY4 71 aa11.82□□□□□ -0.52
RPL28-204ENST00000431533 ANKRD34BA5PLL1 514 aa11.82□□□□□ -0.52
RPL28-204ENST00000431533 FAM25AB3EWG3 89 aa11.82□□□□□ -0.52
RPL28-204ENST00000431533 FAM25CB3EWG5 89 aa11.82□□□□□ -0.52
RPL28-204ENST00000431533 FAM25GB3EWG6 89 aa11.82□□□□□ -0.52
RPL28-204ENST00000431533 SULT1C2O00338 296 aa11.82□□□□□ -0.52
RPL28-204ENST00000431533 CREBL2O60519 120 aaPredicted RBP11.82□□□□□ -0.52
RPL28-204ENST00000431533 HSPB1P04792 205 aaKnown RBP11.82□□□□□ -0.52
RPL28-204ENST00000431533 RFX2P48378 723 aa11.82□□□□□ -0.52
RPL28-204ENST00000431533 RORCP51449 518 aa11.82□□□□□ -0.52
RPL28-204ENST00000431533 EIF4EBP1Q13541 118 aaPredicted RBP11.82□□□□□ -0.52
RPL28-204ENST00000431533 RNASE12Q5GAN4 147 aaKnown RBP11.82□□□□□ -0.52
RPL28-204ENST00000431533 ANKRD13BQ86YJ7 626 aa11.82□□□□□ -0.52
RPL28-204ENST00000431533 OR6Q1Q8NGQ2 317 aa11.82□□□□□ -0.52
RPL28-204ENST00000431533 OR5H2Q8NGV7 314 aa11.82□□□□□ -0.52
RPL28-204ENST00000431533 RHOVQ96L33 236 aa11.82□□□□□ -0.52
RPL28-204ENST00000431533 MRPS26Q9BYN8 205 aaKnown RBP11.82□□□□□ -0.52
RPL28-204ENST00000431533 H3BUA1 57 aa11.81□□□□□ -0.52
RPL28-204ENST00000431533 SAP30O75446 220 aa11.81□□□□□ -0.52
RPL28-204ENST00000431533 GABARAPO95166 117 aa11.81□□□□□ -0.52
RPL28-204ENST00000431533 APOA1P02647 267 aa11.81□□□□□ -0.52
RPL28-204ENST00000431533 OR9G9P0C7N8 305 aa11.81□□□□□ -0.52
RPL28-204ENST00000431533 KIR2DS2P43631 304 aa11.81□□□□□ -0.52
RPL28-204ENST00000431533 BRWD1-AS2P59051 145 aa11.81□□□□□ -0.52
RPL28-204ENST00000431533 CATR1Q13166 79 aa11.81□□□□□ -0.52
RPL28-204ENST00000431533 ZNF818PQ6ZRF7 136 aa11.81□□□□□ -0.52
RPL28-204ENST00000431533 SPAG16Q8N0X2 631 aa11.81□□□□□ -0.52
RPL28-204ENST00000431533 OR51H1Q8NH63 302 aa11.81□□□□□ -0.52
RPL28-204ENST00000431533 GIMAP1Q8WWP7 306 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms