RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 PPP5D1E7EU14 171 aa3.8□□□□□ -1.8
LRRK2-204ENST00000430804 LYNX1G3V0Z9 82 aa3.8□□□□□ -1.8
LRRK2-204ENST00000430804 GEMIN2O14893 280 aaKnown RBP3.8□□□□□ -1.8
LRRK2-204ENST00000430804 PGA4P0DJD7 388 aa3.8□□□□□ -1.8
LRRK2-204ENST00000430804 LYNX1P0DP58 116 aa3.8□□□□□ -1.8
LRRK2-204ENST00000430804 WT1P19544 449 aaPredicted RBP3.8□□□□□ -1.8
LRRK2-204ENST00000430804 OPRL1P41146 370 aa3.8□□□□□ -1.8
LRRK2-204ENST00000430804 FUT5Q11128 374 aa3.8□□□□□ -1.8
LRRK2-204ENST00000430804 HLA-DRB5Q30154 266 aa3.8□□□□□ -1.8
LRRK2-204ENST00000430804 PRR30Q53SZ7 412 aaPredicted RBP3.8□□□□□ -1.8
LRRK2-204ENST00000430804 TMEM229BQ8NBD8 167 aa3.8□□□□□ -1.8
LRRK2-204ENST00000430804 MDS2Q8NDY4 140 aa3.8□□□□□ -1.8
LRRK2-204ENST00000430804 C19orf24Q9BVV8 132 aa3.8□□□□□ -1.8
LRRK2-204ENST00000430804 VPREB3Q9UKI3 123 aa3.8□□□□□ -1.8
LRRK2-204ENST00000430804 DSPPQ9NZW4 1301 aa3.8□□□□□ -1.8
LRRK2-204ENST00000430804 DNAJC13O75165 2243 aa3.8□□□□□ -1.8
LRRK2-204ENST00000430804 IFITM5A6NNB3 132 aa3.8□□□□□ -1.8
LRRK2-204ENST00000430804 ZNF561-AS1K7EIQ3 104 aa3.8□□□□□ -1.8
LRRK2-204ENST00000430804 PLPP2O43688 288 aa3.8□□□□□ -1.8
LRRK2-204ENST00000430804 CST4P01036 141 aa3.8□□□□□ -1.8
LRRK2-204ENST00000430804 CTSDP07339 412 aaPredicted RBP3.8□□□□□ -1.8
LRRK2-204ENST00000430804 OR5AL1P0C617 328 aa3.8□□□□□ -1.8
LRRK2-204ENST00000430804 LYL1P12980 280 aa3.8□□□□□ -1.8
LRRK2-204ENST00000430804 CNTFRP26992 372 aa3.8□□□□□ -1.8
LRRK2-204ENST00000430804 RPL12P30050 165 aaKnown RBP3.8□□□□□ -1.8
LRRK2-204ENST00000430804 TWIST1Q15672 202 aa3.8□□□□□ -1.8
LRRK2-204ENST00000430804 TMEM128Q5BJH2 165 aa3.8□□□□□ -1.8
LRRK2-204ENST00000430804 PRNTQ86SH4 94 aa3.8□□□□□ -1.8
LRRK2-204ENST00000430804 TPRX1Q8N7U7 411 aa3.8□□□□□ -1.8
LRRK2-204ENST00000430804 YIPF5Q969M3 257 aa3.8□□□□□ -1.8
LRRK2-204ENST00000430804 HSPB7Q9UBY9 170 aa3.8□□□□□ -1.8
LRRK2-204ENST00000430804 BRWD1Q9NSI6 2320 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 SHISA3A0PJX4 238 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 J3QR89 54 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 HILS1P60008 231 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 CKS1BP61024 79 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 PSMG4Q5JS54 123 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 C8orf86Q6ZUL3 223 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 IL17RELQ6ZVW7 336 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 LRRC75AQ8NAA5 344 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 SMIM7Q9BQ49 75 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.79□□□□□ -1.8
LRRK2-204ENST00000430804 IGHV1-18A0A0C4DH31 117 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 ADARB2-AS1A8MUL3 147 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 G3V3Q6 166 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 MFNGO00587 321 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 ZNF207O43670 478 aaKnown RBP3.79□□□□□ -1.8
LRRK2-204ENST00000430804 GCM2O75603 506 aaPredicted RBP3.79□□□□□ -1.8
LRRK2-204ENST00000430804 HCCSP53701 268 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 IGLV3-21P80748 117 aaPredicted RBP3.79□□□□□ -1.8
LRRK2-204ENST00000430804 NHLH2Q02577 135 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 SPINK9Q5DT21 86 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 TEX261Q6UWH6 196 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 DRAXINQ8NBI3 349 aaPredicted RBP3.79□□□□□ -1.8
LRRK2-204ENST00000430804 FAM216AQ8WUB2 273 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 ASB13Q8WXK3 278 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 C20orf141Q9NUB4 165 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 KDM3BQ7LBC6 1761 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 ZC3H12DA2A288 527 aaKnown RBP3.79□□□□□ -1.8
LRRK2-204ENST00000430804 CD160O95971 181 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 CA1P00915 261 aaPredicted RBP3.79□□□□□ -1.8
LRRK2-204ENST00000430804 REG1AP05451 166 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 RNASE1P07998 156 aaKnown RBP3.79□□□□□ -1.8
LRRK2-204ENST00000430804 LINC00869P0C866 280 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 PRTN3P24158 256 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 CTF1Q16619 201 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 FAM219BQ5XKK7 198 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 CGB2Q6NT52 195 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 TEX45Q8NA69 505 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 TSKUQ8WUA8 353 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 ZDHHC11Q9H8X9 412 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 TRAV1-2A0A0B4J238 106 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 HSBP1O75506 76 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 IGHV1-46P01743 117 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 HSPB1P04792 205 aaKnown RBP3.79□□□□□ -1.8
LRRK2-204ENST00000430804 DEFB130BP0DP73 79 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 DEFB130AP0DP74 79 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 GP9P14770 177 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 IGFBP2P18065 325 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 MST1P26927 711 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 C5orf64Q2M2E5 130 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 OR10W1Q8NGF6 305 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 C12orf57Q99622 126 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 ZNF586Q9NXT0 402 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 IL20Q9NYY1 176 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 IGHV2-70DA0A0C4DH43 119 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 IL7P13232 177 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 SUCLG1P53597 346 aaKnown RBP3.79□□□□□ -1.8
LRRK2-204ENST00000430804 TPTE2P1Q5T6R2 138 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 SPATA31B1PQ5VZV4 182 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 GLDNQ6ZMI3 551 aaPredicted RBP3.79□□□□□ -1.8
LRRK2-204ENST00000430804 TMUB2Q71RG4 321 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 OR10G4Q8NGN3 311 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 OR10G9Q8NGN4 311 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 OR10G7Q8NGN6 311 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 TMEM204Q9BSN7 226 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 GSX2Q9BZM3 304 aa3.79□□□□□ -1.8
LRRK2-204ENST00000430804 SLIRPQ9GZT3 109 aaKnown RBP3.79□□□□□ -1.8
LRRK2-204ENST00000430804 RBFOX1Q9NWB1 397 aaKnown RBP3.79□□□□□ -1.8
LRRK2-204ENST00000430804 TRGV1A0A0A0MS02 117 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms