RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 OVCH2Q7RTZ1 564 aa10.89□□□□□ -0.67
PTCH1-207ENST00000429896 TMEM14DPA8MWL7 114 aa10.89□□□□□ -0.67
PTCH1-207ENST00000429896 PSG2P11465 335 aa10.89□□□□□ -0.67
PTCH1-207ENST00000429896 SPCS3P61009 180 aa10.89□□□□□ -0.67
PTCH1-207ENST00000429896 SLC35B1P78383 322 aa10.89□□□□□ -0.67
PTCH1-207ENST00000429896 MEF2CQ06413 473 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-207ENST00000429896 NEUROG1Q92886 237 aa10.89□□□□□ -0.67
PTCH1-207ENST00000429896 MRGPRFQ96AM1 343 aa10.89□□□□□ -0.67
PTCH1-207ENST00000429896 MDC1Q14676 2089 aaKnown RBP10.88□□□□□ -0.67
PTCH1-207ENST00000429896 OR8I2Q8N0Y5 310 aa10.88□□□□□ -0.67
PTCH1-207ENST00000429896 KLHDC1Q8N7A1 406 aa10.88□□□□□ -0.67
PTCH1-207ENST00000429896 ATP5SQ99766 215 aa10.88□□□□□ -0.67
PTCH1-207ENST00000429896 HLA-GP17693 338 aa10.88□□□□□ -0.67
PTCH1-207ENST00000429896 C19orf35Q6ZS72 473 aa10.88□□□□□ -0.67
PTCH1-207ENST00000429896 AGAP20933 346 aa10.88□□□□□ -0.67
PTCH1-207ENST00000429896 TWIST1Q15672 202 aa10.88□□□□□ -0.67
PTCH1-207ENST00000429896 FAM162BQ5T6X4 162 aa10.88□□□□□ -0.67
PTCH1-207ENST00000429896 MS4A10Q96PG2 267 aa10.88□□□□□ -0.67
PTCH1-207ENST00000429896 PRNDQ9UKY0 176 aa10.88□□□□□ -0.67
PTCH1-207ENST00000429896 HMSDA8MTL9 139 aa10.88□□□□□ -0.67
PTCH1-207ENST00000429896 C16orf82Q7Z2V1 217 aa10.88□□□□□ -0.67
PTCH1-207ENST00000429896 ZNF645Q8N7E2 425 aa10.88□□□□□ -0.67
PTCH1-207ENST00000429896 Q9N2K0 584 aa10.88□□□□□ -0.67
PTCH1-207ENST00000429896 MMP26Q9NRE1 261 aa10.88□□□□□ -0.67
PTCH1-207ENST00000429896 E7EQL1 145 aa10.88□□□□□ -0.67
PTCH1-207ENST00000429896 MFNGO00587 321 aa10.88□□□□□ -0.67
PTCH1-207ENST00000429896 PLAUP00749 431 aa10.88□□□□□ -0.67
PTCH1-207ENST00000429896 S100A8P05109 93 aa10.88□□□□□ -0.67
PTCH1-207ENST00000429896 MELTFP08582 738 aa10.88□□□□□ -0.67
PTCH1-207ENST00000429896 ZP3P21754 424 aa10.88□□□□□ -0.67
PTCH1-207ENST00000429896 PNRC2Q9NPJ4 139 aaKnown RBP10.88□□□□□ -0.67
PTCH1-207ENST00000429896 ACACAQ13085 2346 aa10.88□□□□□ -0.67
PTCH1-207ENST00000429896 HELTA6NFD8 242 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 PRR32B1ATL7 298 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 J3QR89 54 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 RTN4RL2Q86UN3 420 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 C7orf66A4D0T2 115 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 C1QL2Q7Z5L3 287 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 RNF138Q8WVD3 245 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 TMEM186Q96B77 213 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 ABHD14BQ96IU4 210 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 ZNF319Q9P2F9 582 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 KCNK7Q9Y2U2 307 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 J3QRE1 110 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 VDAC1P21796 283 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 ADIPOQQ15848 244 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 OR2C3Q8N628 320 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 BVESQ8NE79 360 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 NRIP2Q9BQI9 281 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 GSX1Q9H4S2 264 aaPredicted RBP10.87□□□□□ -0.67
PTCH1-207ENST00000429896 OR2T8A6NH00 312 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 IGKV3-20P01619 116 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 FAM157CP0CG43 387 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 CCKARP32238 428 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 TAS2R60P59551 318 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 GHITMQ9H3K2 345 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 ZNF106Q9H2Y7 1883 aaKnown RBP10.87□□□□□ -0.67
PTCH1-207ENST00000429896 UBE2L6O14933 153 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 EIF3GO75821 320 aaKnown RBP eCLIP10.87□□□□□ -0.67
PTCH1-207ENST00000429896 P01737 135 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 C10orf113Q5VZT2 155 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 CCDC88CQ9P219 2028 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 CXCL3P19876 107 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 MDKP21741 143 aaPredicted RBP10.87□□□□□ -0.67
PTCH1-207ENST00000429896 COL8A1P27658 744 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 EFNB1P98172 346 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 ZNF524Q96C55 264 aa10.87□□□□□ -0.67
PTCH1-207ENST00000429896 SVILO95425 2214 aa10.86□□□□□ -0.67
PTCH1-207ENST00000429896 FAM181BA6NEQ2 426 aa10.86□□□□□ -0.67
PTCH1-207ENST00000429896 RCC1P18754 421 aaPredicted RBP10.86□□□□□ -0.67
PTCH1-207ENST00000429896 LEAP2Q969E1 77 aa10.86□□□□□ -0.67
PTCH1-207ENST00000429896 SDHCQ99643 169 aaPredicted RBP10.86□□□□□ -0.67
PTCH1-207ENST00000429896 CACNA1CQ13936 2221 aa10.86□□□□□ -0.67
PTCH1-207ENST00000429896 C11orf94C9JXX5 98 aa10.86□□□□□ -0.67
PTCH1-207ENST00000429896 SRSF10O75494 262 aaKnown RBP10.86□□□□□ -0.67
PTCH1-207ENST00000429896 Q6ZN92 141 aa10.86□□□□□ -0.67
PTCH1-207ENST00000429896 RAB40CQ96S21 281 aa10.86□□□□□ -0.67
PTCH1-207ENST00000429896 FBLL1A6NHQ2 334 aaKnown RBP10.86□□□□□ -0.67
PTCH1-207ENST00000429896 HPRT1P00492 218 aa10.86□□□□□ -0.67
PTCH1-207ENST00000429896 SLC25A16P16260 332 aa10.86□□□□□ -0.67
PTCH1-207ENST00000429896 SRSF9Q13242 221 aaKnown RBP eCLIP10.86□□□□□ -0.67
PTCH1-207ENST00000429896 ASPHD2Q6ICH7 369 aa10.86□□□□□ -0.67
PTCH1-207ENST00000429896 FAM210BQ96KR6 192 aa10.86□□□□□ -0.67
PTCH1-207ENST00000429896 RANP62826 216 aaKnown RBP10.86□□□□□ -0.67
PTCH1-207ENST00000429896 RPL24P83731 157 aaKnown RBP10.86□□□□□ -0.67
PTCH1-207ENST00000429896 FHL1Q13642 323 aa10.86□□□□□ -0.67
PTCH1-207ENST00000429896 GTF3AQ92664 365 aaKnown RBP10.86□□□□□ -0.67
PTCH1-207ENST00000429896 SSTR5P35346 364 aa10.86□□□□□ -0.67
PTCH1-207ENST00000429896 TDGF1P3P51864 188 aa10.86□□□□□ -0.67
PTCH1-207ENST00000429896 TRAF4Q9BUZ4 470 aaPredicted RBP10.86□□□□□ -0.67
PTCH1-207ENST00000429896 LINC00312Q9Y6C7 94 aa10.86□□□□□ -0.67
PTCH1-207ENST00000429896 M0R3E3 92 aa10.85□□□□□ -0.67
PTCH1-207ENST00000429896 MPC2O95563 127 aa10.85□□□□□ -0.67
PTCH1-207ENST00000429896 PF4V1P10720 104 aa10.85□□□□□ -0.67
PTCH1-207ENST00000429896 IGFBP3P17936 291 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-207ENST00000429896 FAM216AQ8WUB2 273 aa10.85□□□□□ -0.67
PTCH1-207ENST00000429896 SPSB4Q96A44 273 aa10.85□□□□□ -0.67
PTCH1-207ENST00000429896 RRN3P1Q2M238 152 aa10.85□□□□□ -0.67
PTCH1-207ENST00000429896 CYB5R2Q6BCY4 276 aa10.85□□□□□ -0.67
PTCH1-207ENST00000429896 LDLRAD3Q86YD5 345 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms