RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 WDR86Q86TI4 376 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 PRR18Q8N4B5 295 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 OR10G9Q8NGN4 311 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 OR10G7Q8NGN6 311 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 OR10D4PQ8NGN7 298 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 OR5R1Q8NH85 324 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 SLC25A40Q8TBP6 338 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 DTD1Q8TEA8 209 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 EDARADDQ8WWZ3 215 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 RAB1CQ92928 201 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 NEIL1Q96FI4 390 aaPredicted RBP7.28□□□□□ -1.24
GABPB1-205ENST00000429662 ABHD17AQ96GS6 310 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 IMMP2LQ96T52 175 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 OR2J1Q9GZK6 312 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 OR2D2Q9H210 308 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 C12orf49Q9H741 205 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 VSIRQ9H7M9 311 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 ZDHHC11Q9H8X9 412 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 RAB9BQ9NP90 201 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 OBP2BQ9NPH6 170 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 MED12Q93074 2177 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 POLEQ07864 2286 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 ARGFXA6NJG6 315 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 IFITM10A6NMD0 228 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 PMS2P5A8MQ11 134 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 C12orf77C9JDV5 145 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 PPP5D1E7EU14 171 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 F6UZH7 168 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 DVL1O14640 695 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 SPINT2O43291 252 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 PDE6DO43924 150 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 HBZP02008 142 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 KITLGP21583 273 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 MDKP21741 143 aaPredicted RBP7.27□□□□□ -1.25
GABPB1-205ENST00000429662 FGF7P21781 194 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 CD82P27701 267 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 KIR2DS2P43631 304 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 FGF8P55075 233 aaPredicted RBP7.27□□□□□ -1.25
GABPB1-205ENST00000429662 ELLP55199 621 aaPredicted RBP7.27□□□□□ -1.25
GABPB1-205ENST00000429662 PKIAP61925 76 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 IZUMO4Q1ZYL8 232 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 SMIM21Q3B7S5 101 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 AARDQ4LEZ3 155 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 FAM209BQ5JX69 171 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 FFAR4Q5NUL3 377 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 OR8G2PQ6IF36 304 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 KCNIP4Q6PIL6 250 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 SPNS3Q6ZMD2 512 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 ACP7Q6ZNF0 438 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.27□□□□□ -1.25
GABPB1-205ENST00000429662 FAM90A1Q86YD7 464 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 TMEM183AQ8IXX5 376 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 RPP25LQ8N5L8 163 aaKnown RBP7.27□□□□□ -1.25
GABPB1-205ENST00000429662 OR52E5Q8NH55 327 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 PPP1R35Q8TAP8 253 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 RNASEH2CQ8TDP1 164 aaKnown RBP7.27□□□□□ -1.25
GABPB1-205ENST00000429662 ABHD5Q8WTS1 349 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 FRZBQ92765 325 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 KCNIP2Q9NS61 270 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 TINAGQ9UJW2 476 aa7.27□□□□□ -1.25
GABPB1-205ENST00000429662 ODAMA1E959 279 aa7.26□□□□□ -1.25
GABPB1-205ENST00000429662 TSTD3H0UI37 97 aa7.26□□□□□ -1.25
GABPB1-205ENST00000429662 PHOX2AO14813 284 aa7.26□□□□□ -1.25
GABPB1-205ENST00000429662 RBFOX2O43251 390 aaKnown RBP eCLIP7.26□□□□□ -1.25
GABPB1-205ENST00000429662 HRASP01112 189 aa7.26□□□□□ -1.25
GABPB1-205ENST00000429662 KRASP01116 189 aa7.26□□□□□ -1.25
GABPB1-205ENST00000429662 TYMSP04818 313 aa7.26□□□□□ -1.25
GABPB1-205ENST00000429662 GRPP07492 148 aa7.26□□□□□ -1.25
GABPB1-205ENST00000429662 HOXB4P17483 251 aaPredicted RBP7.26□□□□□ -1.25
GABPB1-205ENST00000429662 GZMHP20718 246 aa7.26□□□□□ -1.25
GABPB1-205ENST00000429662 IGHV1-2P23083 117 aa7.26□□□□□ -1.25
GABPB1-205ENST00000429662 GALR1P47211 349 aa7.26□□□□□ -1.25
GABPB1-205ENST00000429662 RPL23P62829 140 aaKnown RBP7.26□□□□□ -1.25
GABPB1-205ENST00000429662 ARG2P78540 354 aa7.26□□□□□ -1.25
GABPB1-205ENST00000429662 LCN2P80188 198 aa7.26□□□□□ -1.25
GABPB1-205ENST00000429662 DEFA6Q01524 100 aa7.26□□□□□ -1.25
GABPB1-205ENST00000429662 PSG7Q13046 419 aa7.26□□□□□ -1.25
GABPB1-205ENST00000429662 ADIRFQ15847 76 aa7.26□□□□□ -1.25
GABPB1-205ENST00000429662 SPATA46Q5T0L3 261 aa7.26□□□□□ -1.25
GABPB1-205ENST00000429662 Q6ZT83 130 aa7.26□□□□□ -1.25
GABPB1-205ENST00000429662 FAM214BQ7L5A3 538 aa7.26□□□□□ -1.25
GABPB1-205ENST00000429662 C16orf82Q7Z2V1 217 aa7.26□□□□□ -1.25
GABPB1-205ENST00000429662 CISD2Q8N5K1 135 aaKnown RBP7.26□□□□□ -1.25
GABPB1-205ENST00000429662 ZNF383Q8NA42 475 aa7.26□□□□□ -1.25
GABPB1-205ENST00000429662 OR1L1Q8NH94 360 aa7.26□□□□□ -1.25
GABPB1-205ENST00000429662 KLF14Q8TD94 323 aaPredicted RBP7.26□□□□□ -1.25
GABPB1-205ENST00000429662 DEFB127Q9H1M4 99 aa7.26□□□□□ -1.25
GABPB1-205ENST00000429662 OR51B6Q9H340 312 aa7.26□□□□□ -1.25
GABPB1-205ENST00000429662 NCOR1P1Q9H4R4 102 aa7.26□□□□□ -1.25
GABPB1-205ENST00000429662 GAB2Q9UQC2 676 aa7.26□□□□□ -1.25
GABPB1-205ENST00000429662 TP53TG5Q9Y2B4 290 aa7.26□□□□□ -1.25
GABPB1-205ENST00000429662 VPS13CQ709C8 3753 aa7.26□□□□□ -1.25
GABPB1-205ENST00000429662 NCKAP5O14513 1909 aa7.26□□□□□ -1.25
GABPB1-205ENST00000429662 DIDO1Q9BTC0 2240 aaKnown RBP7.26□□□□□ -1.25
GABPB1-205ENST00000429662 TRAV39A0A0B4J263 110 aa7.25□□□□□ -1.25
GABPB1-205ENST00000429662 A0A1B0GWJ7 208 aa7.25□□□□□ -1.25
GABPB1-205ENST00000429662 ITGB1BP1O14713 200 aa7.25□□□□□ -1.25
GABPB1-205ENST00000429662 GGCTO75223 188 aaKnown RBP7.25□□□□□ -1.25
GABPB1-205ENST00000429662 WISP2O76076 250 aa7.25□□□□□ -1.25
GABPB1-205ENST00000429662 S1PR2O95136 353 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms