RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 OSR1Q8TAX0 266 aaPredicted RBP11.78□□□□□ -0.52
SEC13-210ENST00000428626 ACOT12Q8WYK0 555 aa11.78□□□□□ -0.52
SEC13-210ENST00000428626 ADTRPQ96IZ2 230 aa11.78□□□□□ -0.52
SEC13-210ENST00000428626 ST6GALNAC5Q9BVH7 336 aa11.78□□□□□ -0.52
SEC13-210ENST00000428626 DMRT1Q9Y5R6 373 aa11.78□□□□□ -0.52
SEC13-210ENST00000428626 A0A1B0GW64 132 aa11.77□□□□□ -0.53
SEC13-210ENST00000428626 METTL21EPA6NDL7 271 aa11.77□□□□□ -0.53
SEC13-210ENST00000428626 TMEM235A6NFC5 223 aa11.77□□□□□ -0.53
SEC13-210ENST00000428626 E7EUB6 86 aa11.77□□□□□ -0.53
SEC13-210ENST00000428626 SSX5O60225 188 aa11.77□□□□□ -0.53
SEC13-210ENST00000428626 FCGR3BO75015 233 aa11.77□□□□□ -0.53
SEC13-210ENST00000428626 HLA-DQB1P01920 261 aa11.77□□□□□ -0.53
SEC13-210ENST00000428626 LYL1P12980 280 aa11.77□□□□□ -0.53
SEC13-210ENST00000428626 EDN2P20800 178 aa11.77□□□□□ -0.53
SEC13-210ENST00000428626 EIF4EBP1Q13541 118 aaPredicted RBP11.77□□□□□ -0.53
SEC13-210ENST00000428626 HAGHQ16775 308 aa11.77□□□□□ -0.53
SEC13-210ENST00000428626 UBE2UQ5VVX9 321 aa11.77□□□□□ -0.53
SEC13-210ENST00000428626 HACD4Q5VWC8 232 aa11.77□□□□□ -0.53
SEC13-210ENST00000428626 SGPP2Q8IWX5 399 aa11.77□□□□□ -0.53
SEC13-210ENST00000428626 ZNF645Q8N7E2 425 aa11.77□□□□□ -0.53
SEC13-210ENST00000428626 TXNL4BQ9NX01 149 aaKnown RBP11.77□□□□□ -0.53
SEC13-210ENST00000428626 SIGLEC8Q9NYZ4 499 aa11.77□□□□□ -0.53
SEC13-210ENST00000428626 RBMX2Q9Y388 322 aaKnown RBP11.77□□□□□ -0.53
SEC13-210ENST00000428626 HMX3A6NHT5 357 aa11.76□□□□□ -0.53
SEC13-210ENST00000428626 GALP22466 123 aa11.76□□□□□ -0.53
SEC13-210ENST00000428626 EXOSC2Q13868 293 aaKnown RBP11.76□□□□□ -0.53
SEC13-210ENST00000428626 CDK10Q15131 360 aa11.76□□□□□ -0.53
SEC13-210ENST00000428626 RPEL1Q2QD12 228 aa11.76□□□□□ -0.53
SEC13-210ENST00000428626 GPHA2Q96T91 129 aa11.76□□□□□ -0.53
SEC13-210ENST00000428626 BLOC1S6Q9UL45 172 aa11.76□□□□□ -0.53
SEC13-210ENST00000428626 OR2W1Q9Y3N9 320 aa11.76□□□□□ -0.53
SEC13-210ENST00000428626 EPPK1P58107 5090 aaKnown RBP11.76□□□□□ -0.53
SEC13-210ENST00000428626 NOTOA8MTQ0 251 aa11.75□□□□□ -0.53
SEC13-210ENST00000428626 TEX22C9J3V5 150 aa11.75□□□□□ -0.53
SEC13-210ENST00000428626 H0Y980 276 aa11.75□□□□□ -0.53
SEC13-210ENST00000428626 MPPED1O15442 326 aa11.75□□□□□ -0.53
SEC13-210ENST00000428626 OR2A4O95047 310 aa11.75□□□□□ -0.53
SEC13-210ENST00000428626 IL6RP08887 468 aaPredicted RBP11.75□□□□□ -0.53
SEC13-210ENST00000428626 FGF9P31371 208 aaPredicted RBP11.75□□□□□ -0.53
SEC13-210ENST00000428626 HSPA13P48723 471 aa11.75□□□□□ -0.53
SEC13-210ENST00000428626 KCTD9Q7L273 389 aa11.75□□□□□ -0.53
SEC13-210ENST00000428626 SPARTQ8N0X7 666 aa11.75□□□□□ -0.53
SEC13-210ENST00000428626 TTC9CQ8N5M4 171 aa11.75□□□□□ -0.53
SEC13-210ENST00000428626 SNAPC3Q92966 411 aa11.75□□□□□ -0.53
SEC13-210ENST00000428626 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.74□□□□□ -0.53
SEC13-210ENST00000428626 FAM223BA6NKX1 122 aa11.74□□□□□ -0.53
SEC13-210ENST00000428626 PPP5D1E7EU14 171 aa11.74□□□□□ -0.53
SEC13-210ENST00000428626 TUSC2O75896 110 aa11.74□□□□□ -0.53
SEC13-210ENST00000428626 OR2J3O76001 311 aa11.74□□□□□ -0.53
SEC13-210ENST00000428626 HLA-AP01891 365 aaKnown RBP11.74□□□□□ -0.53
SEC13-210ENST00000428626 PTHLHP12272 177 aa11.74□□□□□ -0.53
SEC13-210ENST00000428626 GABARAPL2P60520 117 aa11.74□□□□□ -0.53
SEC13-210ENST00000428626 ATP5G2Q06055 141 aa11.74□□□□□ -0.53
SEC13-210ENST00000428626 CD300EQ496F6 205 aaPredicted RBP11.74□□□□□ -0.53
SEC13-210ENST00000428626 FAM223AQ8IWN6 122 aa11.74□□□□□ -0.53
SEC13-210ENST00000428626 MMD2Q8IY49 270 aa11.74□□□□□ -0.53
SEC13-210ENST00000428626 Q8N402 240 aa11.74□□□□□ -0.53
SEC13-210ENST00000428626 LGALS14Q8TCE9 139 aa11.74□□□□□ -0.53
SEC13-210ENST00000428626 DCUN1D5Q9BTE7 237 aa11.74□□□□□ -0.53
SEC13-210ENST00000428626 DCSTAMPQ9H295 470 aa11.74□□□□□ -0.53
SEC13-210ENST00000428626 VCX3BQ9H321 246 aa11.74□□□□□ -0.53
SEC13-210ENST00000428626 RNF167Q9H6Y7 350 aa11.74□□□□□ -0.53
SEC13-210ENST00000428626 RETNQ9HD89 108 aa11.74□□□□□ -0.53
SEC13-210ENST00000428626 DAPK2Q9UIK4 370 aa11.74□□□□□ -0.53
SEC13-210ENST00000428626 RAB26Q9ULW5 256 aa11.74□□□□□ -0.53
SEC13-210ENST00000428626 LCE6AA0A183 80 aa11.73□□□□□ -0.53
SEC13-210ENST00000428626 ZNF785A8K8V0 405 aa11.73□□□□□ -0.53
SEC13-210ENST00000428626 CLEC2LP0C7M8 214 aa11.73□□□□□ -0.53
SEC13-210ENST00000428626 MYOD1P15172 320 aa11.73□□□□□ -0.53
SEC13-210ENST00000428626 PSMB9P28065 219 aa11.73□□□□□ -0.53
SEC13-210ENST00000428626 ARL6IP1Q15041 203 aa11.73□□□□□ -0.53
SEC13-210ENST00000428626 C15orf32Q32M92 178 aa11.73□□□□□ -0.53
SEC13-210ENST00000428626 LCN12Q6JVE5 192 aa11.73□□□□□ -0.53
SEC13-210ENST00000428626 CNIH2Q6PI25 160 aa11.73□□□□□ -0.53
SEC13-210ENST00000428626 LINC00322Q6ZN03 302 aaPredicted RBP11.73□□□□□ -0.53
SEC13-210ENST00000428626 PUSL1Q8N0Z8 303 aaKnown RBP11.73□□□□□ -0.53
SEC13-210ENST00000428626 OR5H6Q8NGV6 325 aa11.73□□□□□ -0.53
SEC13-210ENST00000428626 SPIN2AQ99865 258 aa11.73□□□□□ -0.53
SEC13-210ENST00000428626 SPIN2BQ9BPZ2 258 aa11.73□□□□□ -0.53
SEC13-210ENST00000428626 WFDC10AQ9H1F0 79 aa11.73□□□□□ -0.53
SEC13-210ENST00000428626 OR51E2Q9H255 320 aa11.73□□□□□ -0.53
SEC13-210ENST00000428626 ANXA10Q9UJ72 324 aa11.73□□□□□ -0.53
SEC13-210ENST00000428626 SPATA2Q9UM82 520 aa11.73□□□□□ -0.53
SEC13-210ENST00000428626 SELENOKQ9Y6D0 94 aa11.73□□□□□ -0.53
SEC13-210ENST00000428626 HYDINQ4G0P3 5121 aa11.72□□□□□ -0.53
SEC13-210ENST00000428626 CGB1A6NKQ9 187 aa11.72□□□□□ -0.53
SEC13-210ENST00000428626 KBTBD11O94819 623 aa11.72□□□□□ -0.53
SEC13-210ENST00000428626 CD7P09564 240 aa11.72□□□□□ -0.53
SEC13-210ENST00000428626 CTXN2P0C2S0 81 aa11.72□□□□□ -0.53
SEC13-210ENST00000428626 TATDN3Q17R31 274 aa11.72□□□□□ -0.53
SEC13-210ENST00000428626 SFXN4Q6P4A7 337 aa11.72□□□□□ -0.53
SEC13-210ENST00000428626 GVQW1Q8N7I0 195 aa11.72□□□□□ -0.53
SEC13-210ENST00000428626 NECAP1Q8NC96 275 aa11.72□□□□□ -0.53
SEC13-210ENST00000428626 TMEM167AQ8TBQ9 72 aa11.72□□□□□ -0.53
SEC13-210ENST00000428626 SLC25A38Q96DW6 304 aa11.72□□□□□ -0.53
SEC13-210ENST00000428626 FANCD2OSQ96PS1 177 aa11.72□□□□□ -0.53
SEC13-210ENST00000428626 SPATA25Q9BR10 227 aa11.72□□□□□ -0.53
SEC13-210ENST00000428626 CENPOQ9BU64 300 aa11.72□□□□□ -0.53
SEC13-210ENST00000428626 PLEKHA3Q9HB20 300 aa11.72□□□□□ -0.53
SEC13-210ENST00000428626 PALMDQ9NP74 551 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms