RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 HS3ST3A1Q9Y663 406 aa13.49□□□□□ -0.25
C9orf3-206ENST00000428313 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.48□□□□□ -0.25
C9orf3-206ENST00000428313 CRYBB3P26998 211 aa13.48□□□□□ -0.25
C9orf3-206ENST00000428313 CA7P43166 264 aa13.48□□□□□ -0.25
C9orf3-206ENST00000428313 TNFRSF4P43489 277 aa13.48□□□□□ -0.25
C9orf3-206ENST00000428313 HIST1H1AQ02539 215 aaPredicted RBP13.48□□□□□ -0.25
C9orf3-206ENST00000428313 TNXAQ16473 311 aa13.48□□□□□ -0.25
C9orf3-206ENST00000428313 MRPL54Q6P161 138 aaKnown RBP13.48□□□□□ -0.25
C9orf3-206ENST00000428313 RASL11AQ6T310 242 aa13.48□□□□□ -0.25
C9orf3-206ENST00000428313 FGFRL1Q8N441 504 aa13.48□□□□□ -0.25
C9orf3-206ENST00000428313 TMEM70Q9BUB7 260 aa13.48□□□□□ -0.25
C9orf3-206ENST00000428313 IL23AQ9NPF7 189 aa13.48□□□□□ -0.25
C9orf3-206ENST00000428313 RTTNQ86VV8 2226 aa13.48□□□□□ -0.25
C9orf3-206ENST00000428313 A0A1B0GV72 72 aa13.48□□□□□ -0.25
C9orf3-206ENST00000428313 CCL5P13501 91 aa13.48□□□□□ -0.25
C9orf3-206ENST00000428313 SSTR5P35346 364 aa13.48□□□□□ -0.25
C9orf3-206ENST00000428313 ARF1P84077 181 aaKnown RBP13.48□□□□□ -0.25
C9orf3-206ENST00000428313 FAM27BQ5VT28 67 aa13.48□□□□□ -0.25
C9orf3-206ENST00000428313 NEGR1Q7Z3B1 354 aa13.48□□□□□ -0.25
C9orf3-206ENST00000428313 C5orf17Q8NAS9 161 aa13.48□□□□□ -0.25
C9orf3-206ENST00000428313 RNF208Q9H0X6 261 aa13.48□□□□□ -0.25
C9orf3-206ENST00000428313 OR2D2Q9H210 308 aa13.48□□□□□ -0.25
C9orf3-206ENST00000428313 OR4C46A6NHA9 309 aa13.47□□□□□ -0.25
C9orf3-206ENST00000428313 MPDU1O75352 247 aa13.47□□□□□ -0.25
C9orf3-206ENST00000428313 SMIM17P0DL12 118 aa13.47□□□□□ -0.25
C9orf3-206ENST00000428313 BCL3P20749 454 aa13.47□□□□□ -0.25
C9orf3-206ENST00000428313 KRTAP27-1Q3LI81 207 aa13.47□□□□□ -0.25
C9orf3-206ENST00000428313 GCSAMLQ5JQS6 135 aa13.47□□□□□ -0.25
C9orf3-206ENST00000428313 WIPF2Q8TF74 440 aaPredicted RBP13.47□□□□□ -0.25
C9orf3-206ENST00000428313 PIGCQ92535 297 aa13.47□□□□□ -0.25
C9orf3-206ENST00000428313 CRISPLD2Q9H0B8 497 aa13.47□□□□□ -0.25
C9orf3-206ENST00000428313 MMP17Q9ULZ9 603 aa13.47□□□□□ -0.25
C9orf3-206ENST00000428313 YTHDF2Q9Y5A9 579 aaKnown RBP13.47□□□□□ -0.25
C9orf3-206ENST00000428313 IGLV3-32A0A0A0MS00 114 aa13.47□□□□□ -0.25
C9orf3-206ENST00000428313 VAMP5O95183 116 aa13.47□□□□□ -0.25
C9orf3-206ENST00000428313 P0C879 139 aa13.47□□□□□ -0.25
C9orf3-206ENST00000428313 AREGP15514 252 aa13.47□□□□□ -0.25
C9orf3-206ENST00000428313 WDR74Q6RFH5 385 aaPredicted RBP13.47□□□□□ -0.25
C9orf3-206ENST00000428313 OR1F12Q8NHA8 337 aa13.47□□□□□ -0.25
C9orf3-206ENST00000428313 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.47□□□□□ -0.25
C9orf3-206ENST00000428313 GP6Q9HCN6 339 aa13.47□□□□□ -0.25
C9orf3-206ENST00000428313 C19orf25Q9UFG5 118 aaPredicted RBP13.47□□□□□ -0.25
C9orf3-206ENST00000428313 SMIM27A0A1W2PRY6 76 aa13.46□□□□□ -0.25
C9orf3-206ENST00000428313 LRRC30A6NM36 301 aa13.46□□□□□ -0.25
C9orf3-206ENST00000428313 G3V3Y1 287 aa13.46□□□□□ -0.25
C9orf3-206ENST00000428313 PPIAL4GP0DN37 164 aa13.46□□□□□ -0.25
C9orf3-206ENST00000428313 CEACAM3P40198 252 aa13.46□□□□□ -0.25
C9orf3-206ENST00000428313 OPRK1P41145 380 aa13.46□□□□□ -0.25
C9orf3-206ENST00000428313 ST6GALNAC6Q969X2 333 aa13.46□□□□□ -0.25
C9orf3-206ENST00000428313 TMEM45BQ96B21 275 aa13.46□□□□□ -0.25
C9orf3-206ENST00000428313 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.46□□□□□ -0.25
C9orf3-206ENST00000428313 MTCH1Q9NZJ7 389 aa13.46□□□□□ -0.25
C9orf3-206ENST00000428313 RARRES3Q9UL19 164 aa13.46□□□□□ -0.25
C9orf3-206ENST00000428313 PPP1R3CQ9UQK1 317 aa13.46□□□□□ -0.25
C9orf3-206ENST00000428313 C5orf67F2Z3F1 127 aa13.46□□□□□ -0.26
C9orf3-206ENST00000428313 CELA2BP08218 269 aaPredicted RBP13.46□□□□□ -0.26
C9orf3-206ENST00000428313 GATA2P23769 480 aaPredicted RBP13.46□□□□□ -0.26
C9orf3-206ENST00000428313 FKBP2P26885 142 aaKnown RBP13.46□□□□□ -0.26
C9orf3-206ENST00000428313 PRSS12P56730 875 aa13.46□□□□□ -0.26
C9orf3-206ENST00000428313 SEC11AP67812 179 aa13.46□□□□□ -0.26
C9orf3-206ENST00000428313 SPATA12Q7Z6I5 190 aa13.46□□□□□ -0.26
C9orf3-206ENST00000428313 OR1N2Q8NGR9 330 aa13.46□□□□□ -0.26
C9orf3-206ENST00000428313 WNT16Q9UBV4 365 aa13.46□□□□□ -0.26
C9orf3-206ENST00000428313 H3BMH7 237 aa13.45□□□□□ -0.26
C9orf3-206ENST00000428313 SPINK4O60575 86 aa13.45□□□□□ -0.26
C9orf3-206ENST00000428313 MT-CO2P00403 227 aa13.45□□□□□ -0.26
C9orf3-206ENST00000428313 ZNF16P17020 682 aaPredicted RBP13.45□□□□□ -0.26
C9orf3-206ENST00000428313 EN2P19622 333 aaPredicted RBP13.45□□□□□ -0.26
C9orf3-206ENST00000428313 GDF1P27539 372 aa13.45□□□□□ -0.26
C9orf3-206ENST00000428313 LINC00596Q86U02 117 aa13.45□□□□□ -0.26
C9orf3-206ENST00000428313 SPSB4Q96A44 273 aa13.45□□□□□ -0.26
C9orf3-206ENST00000428313 SAP30LQ9HAJ7 183 aa13.45□□□□□ -0.26
C9orf3-206ENST00000428313 SCRT2Q9NQ03 307 aa13.45□□□□□ -0.26
C9orf3-206ENST00000428313 C7orf71A4D174 169 aa13.44□□□□□ -0.26
C9orf3-206ENST00000428313 IZUMO1RA6ND01 250 aa13.44□□□□□ -0.26
C9orf3-206ENST00000428313 ISLRO14498 428 aa13.44□□□□□ -0.26
C9orf3-206ENST00000428313 EDDM3BP56851 147 aa13.44□□□□□ -0.26
C9orf3-206ENST00000428313 FAM162BQ5T6X4 162 aa13.44□□□□□ -0.26
C9orf3-206ENST00000428313 TNFRSF19Q9NS68 423 aa13.44□□□□□ -0.26
C9orf3-206ENST00000428313 TMEM38BQ9NVV0 291 aa13.44□□□□□ -0.26
C9orf3-206ENST00000428313 ARL2-SNX15V9GYD0 113 aa13.44□□□□□ -0.26
C9orf3-206ENST00000428313 RRHO14718 337 aa13.44□□□□□ -0.26
C9orf3-206ENST00000428313 USF1P22415 310 aaPredicted RBP13.44□□□□□ -0.26
C9orf3-206ENST00000428313 GCHFRP30047 84 aa13.44□□□□□ -0.26
C9orf3-206ENST00000428313 KIR2DL1P43626 348 aaPredicted RBP13.44□□□□□ -0.26
C9orf3-206ENST00000428313 GNG4P50150 75 aa13.44□□□□□ -0.26
C9orf3-206ENST00000428313 C20orf204Q6ZNR8 217 aa13.44□□□□□ -0.26
C9orf3-206ENST00000428313 CHRNA10Q9GZZ6 450 aa13.44□□□□□ -0.26
C9orf3-206ENST00000428313 MS4A6AQ9H2W1 248 aa13.44□□□□□ -0.26
C9orf3-206ENST00000428313 ZNF331Q9NQX6 463 aaPredicted RBP13.44□□□□□ -0.26
C9orf3-206ENST00000428313 KLRF1Q9NZS2 232 aa13.44□□□□□ -0.26
C9orf3-206ENST00000428313 TP73-AS1Q9UF72 201 aa13.44□□□□□ -0.26
C9orf3-206ENST00000428313 ZG16O60844 167 aa13.43□□□□□ -0.26
C9orf3-206ENST00000428313 SLAQ13239 276 aa13.43□□□□□ -0.26
C9orf3-206ENST00000428313 Q6ZSR6 202 aa13.43□□□□□ -0.26
C9orf3-206ENST00000428313 SPACA3Q8IXA5 215 aa13.43□□□□□ -0.26
C9orf3-206ENST00000428313 YAF2Q8IY57 180 aa13.43□□□□□ -0.26
C9orf3-206ENST00000428313 ZNF296Q8WUU4 475 aaPredicted RBP13.43□□□□□ -0.26
C9orf3-206ENST00000428313 GUCD1Q96NT3 240 aa13.43□□□□□ -0.26
C9orf3-206ENST00000428313 CHRDL1Q9BU40 450 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms