RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 MOB3BQ86TA1 216 aa12.24□□□□□ -0.45
GINS3-203ENST00000426538 VKORC1L1Q8N0U8 176 aa12.24□□□□□ -0.45
GINS3-203ENST00000426538 TBX15Q96SF7 602 aa12.24□□□□□ -0.45
GINS3-203ENST00000426538 PLSCR3Q9NRY6 295 aa12.24□□□□□ -0.45
GINS3-203ENST00000426538 NSG2Q9Y328 171 aa12.24□□□□□ -0.45
GINS3-203ENST00000426538 FAM90A9PA6NNJ1 464 aa12.23□□□□□ -0.45
GINS3-203ENST00000426538 LY6LH3BQJ8 138 aa12.23□□□□□ -0.45
GINS3-203ENST00000426538 P0C879 139 aa12.23□□□□□ -0.45
GINS3-203ENST00000426538 CXCL2P19875 107 aa12.23□□□□□ -0.45
GINS3-203ENST00000426538 POLR2GP62487 172 aaKnown RBP eCLIP12.23□□□□□ -0.45
GINS3-203ENST00000426538 LOXL1Q08397 574 aaPredicted RBP12.23□□□□□ -0.45
GINS3-203ENST00000426538 TPTE2P1Q5T6R2 138 aa12.23□□□□□ -0.45
GINS3-203ENST00000426538 ACOT7LQ6ZUV0 252 aa12.23□□□□□ -0.45
GINS3-203ENST00000426538 OR4A16Q8NH70 328 aa12.23□□□□□ -0.45
GINS3-203ENST00000426538 REG4Q9BYZ8 158 aa12.23□□□□□ -0.45
GINS3-203ENST00000426538 RCL1Q9Y2P8 373 aaKnown RBP12.23□□□□□ -0.45
GINS3-203ENST00000426538 APCP25054 2843 aa12.23□□□□□ -0.45
GINS3-203ENST00000426538 A0A0D9SG52 128 aa12.23□□□□□ -0.45
GINS3-203ENST00000426538 RNF223E7ERA6 249 aa12.23□□□□□ -0.45
GINS3-203ENST00000426538 OR2F2O95006 317 aa12.23□□□□□ -0.45
GINS3-203ENST00000426538 RPS16P62249 146 aaKnown RBP12.23□□□□□ -0.45
GINS3-203ENST00000426538 OR2F1Q13607 317 aa12.23□□□□□ -0.45
GINS3-203ENST00000426538 TMEM177Q53S58 311 aa12.23□□□□□ -0.45
GINS3-203ENST00000426538 MINOS1Q5TGZ0 78 aa12.23□□□□□ -0.45
GINS3-203ENST00000426538 LINC01356Q8N9X3 169 aa12.23□□□□□ -0.45
GINS3-203ENST00000426538 HARBI1Q96MB7 349 aa12.23□□□□□ -0.45
GINS3-203ENST00000426538 MAGT1Q9H0U3 335 aa12.23□□□□□ -0.45
GINS3-203ENST00000426538 TMEM140Q9NV12 185 aa12.23□□□□□ -0.45
GINS3-203ENST00000426538 HILPDAQ9Y5L2 63 aa12.23□□□□□ -0.45
GINS3-203ENST00000426538 MINOS1-NBL1R4GNA1 71 aa12.23□□□□□ -0.45
GINS3-203ENST00000426538 NAV2Q8IVL1 2488 aa12.22□□□□□ -0.45
GINS3-203ENST00000426538 IGHV3-72A0A0B4J1Y9 119 aa12.22□□□□□ -0.45
GINS3-203ENST00000426538 TRAV20A0A0B4J274 112 aa12.22□□□□□ -0.45
GINS3-203ENST00000426538 FAM90A26D6RGX4 464 aa12.22□□□□□ -0.45
GINS3-203ENST00000426538 CHST1O43916 411 aa12.22□□□□□ -0.45
GINS3-203ENST00000426538 GATA3P23771 443 aa12.22□□□□□ -0.45
GINS3-203ENST00000426538 S100A11P31949 105 aa12.22□□□□□ -0.45
GINS3-203ENST00000426538 VAMP2P63027 116 aa12.22□□□□□ -0.45
GINS3-203ENST00000426538 POU2AF1Q16633 256 aa12.22□□□□□ -0.45
GINS3-203ENST00000426538 MIDNQ504T8 468 aa12.22□□□□□ -0.45
GINS3-203ENST00000426538 CCDC144NLQ6NUI1 221 aa12.22□□□□□ -0.45
GINS3-203ENST00000426538 TMUB2Q71RG4 321 aa12.22□□□□□ -0.45
GINS3-203ENST00000426538 LHFPL4Q7Z7J7 247 aa12.22□□□□□ -0.45
GINS3-203ENST00000426538 OR8H3Q8N146 312 aa12.22□□□□□ -0.45
GINS3-203ENST00000426538 C1orf159Q96HA4 380 aa12.22□□□□□ -0.45
GINS3-203ENST00000426538 Q96MF0 132 aa12.22□□□□□ -0.45
GINS3-203ENST00000426538 ARL6Q9H0F7 186 aa12.22□□□□□ -0.45
GINS3-203ENST00000426538 ZC4H2Q9NQZ6 224 aa12.22□□□□□ -0.45
GINS3-203ENST00000426538 HIF1ANQ9NWT6 349 aa12.22□□□□□ -0.45
GINS3-203ENST00000426538 TBL2Q9Y4P3 447 aaKnown RBP12.22□□□□□ -0.45
GINS3-203ENST00000426538 AUP1Q9Y679 476 aa12.22□□□□□ -0.45
GINS3-203ENST00000426538 A0A096LNT2 108 aa12.21□□□□□ -0.45
GINS3-203ENST00000426538 KCNAB3O43448 404 aa12.21□□□□□ -0.45
GINS3-203ENST00000426538 SSSCA1O60232 199 aa12.21□□□□□ -0.45
GINS3-203ENST00000426538 TSC22D2O75157 780 aa12.21□□□□□ -0.45
GINS3-203ENST00000426538 MED6O75586 246 aa12.21□□□□□ -0.45
GINS3-203ENST00000426538 OR9G9P0C7N8 305 aa12.21□□□□□ -0.45
GINS3-203ENST00000426538 ZNF345Q14585 488 aa12.21□□□□□ -0.45
GINS3-203ENST00000426538 SSX2Q16385 188 aa12.21□□□□□ -0.45
GINS3-203ENST00000426538 OR4A47Q6IF82 309 aa12.21□□□□□ -0.45
GINS3-203ENST00000426538 MS4A7Q9GZW8 240 aaPredicted RBP12.21□□□□□ -0.45
GINS3-203ENST00000426538 C7orf69Q9H7B7 122 aa12.21□□□□□ -0.45
GINS3-203ENST00000426538 CACFD1Q9UGQ2 172 aa12.21□□□□□ -0.45
GINS3-203ENST00000426538 MAP1AP78559 2803 aaPredicted RBP12.21□□□□□ -0.46
GINS3-203ENST00000426538 SRRM4A7MD48 611 aaKnown RBP12.2□□□□□ -0.46
GINS3-203ENST00000426538 OOSP1A8MZH6 123 aa12.2□□□□□ -0.46
GINS3-203ENST00000426538 SYNGR2O43760 224 aa12.2□□□□□ -0.46
GINS3-203ENST00000426538 LGALS7P47929 136 aa12.2□□□□□ -0.46
GINS3-203ENST00000426538 TNFRSF9Q07011 255 aa12.2□□□□□ -0.46
GINS3-203ENST00000426538 LDLRAD2Q5SZI1 272 aa12.2□□□□□ -0.46
GINS3-203ENST00000426538 RBMXL1Q96E39 390 aaKnown RBP12.2□□□□□ -0.46
GINS3-203ENST00000426538 CENPVL3A0A0U1RRI6 287 aa12.2□□□□□ -0.46
GINS3-203ENST00000426538 A0A1W2PPI3 338 aa12.2□□□□□ -0.46
GINS3-203ENST00000426538 RNF222A6NCQ9 220 aa12.2□□□□□ -0.46
GINS3-203ENST00000426538 IFNA17P01571 189 aa12.2□□□□□ -0.46
GINS3-203ENST00000426538 RPL12P30050 165 aaKnown RBP12.2□□□□□ -0.46
GINS3-203ENST00000426538 P2RY1P47900 373 aa12.2□□□□□ -0.46
GINS3-203ENST00000426538 UBE2KP61086 200 aa12.2□□□□□ -0.46
GINS3-203ENST00000426538 OPCMLQ14982 345 aa12.2□□□□□ -0.46
GINS3-203ENST00000426538 KCNRGQ8N5I3 272 aa12.2□□□□□ -0.46
GINS3-203ENST00000426538 MAPK1IP1LQ8NDC0 245 aa12.2□□□□□ -0.46
GINS3-203ENST00000426538 VSTM2AQ8TAG5 236 aa12.2□□□□□ -0.46
GINS3-203ENST00000426538 MALSU1Q96EH3 234 aa12.2□□□□□ -0.46
GINS3-203ENST00000426538 AQP10Q96PS8 301 aa12.2□□□□□ -0.46
GINS3-203ENST00000426538 RAB40CQ96S21 281 aa12.2□□□□□ -0.46
GINS3-203ENST00000426538 HSPB7Q9UBY9 170 aa12.2□□□□□ -0.46
GINS3-203ENST00000426538 KANTRA0A1W2PQU2 76 aa12.19□□□□□ -0.46
GINS3-203ENST00000426538 TIMM23O14925 209 aa12.19□□□□□ -0.46
GINS3-203ENST00000426538 TGFAP01135 160 aa12.19□□□□□ -0.46
GINS3-203ENST00000426538 CAV2P51636 162 aa12.19□□□□□ -0.46
GINS3-203ENST00000426538 OR2B8PP59922 312 aa12.19□□□□□ -0.46
GINS3-203ENST00000426538 RPL23AP62750 156 aaKnown RBP12.19□□□□□ -0.46
GINS3-203ENST00000426538 RELBQ01201 579 aa12.19□□□□□ -0.46
GINS3-203ENST00000426538 GPR157Q5UAW9 335 aa12.19□□□□□ -0.46
GINS3-203ENST00000426538 QTRT1Q9BXR0 403 aaKnown RBP12.19□□□□□ -0.46
GINS3-203ENST00000426538 BET1LQ9NYM9 111 aa12.19□□□□□ -0.46
GINS3-203ENST00000426538 TRAV3A0A0B4J244 114 aa12.18□□□□□ -0.46
GINS3-203ENST00000426538 NPFFO15130 113 aa12.18□□□□□ -0.46
GINS3-203ENST00000426538 GPR137BO60478 399 aa12.18□□□□□ -0.46
GINS3-203ENST00000426538 SAA1P0DJI8 122 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms