RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 NUBP2Q9Y5Y2 271 aa10.61□□□□□ -0.71
SNX3-204ENST00000426155 BOLA2-SMG1P6H3BVE0 249 aa10.6□□□□□ -0.71
SNX3-204ENST00000426155 CCL24O00175 119 aa10.6□□□□□ -0.71
SNX3-204ENST00000426155 APOA1P02647 267 aa10.6□□□□□ -0.71
SNX3-204ENST00000426155 PMP2P02689 132 aa10.6□□□□□ -0.71
SNX3-204ENST00000426155 CBX5P45973 191 aa10.6□□□□□ -0.71
SNX3-204ENST00000426155 RORCP51449 518 aa10.6□□□□□ -0.71
SNX3-204ENST00000426155 BRWD1-AS2P59051 145 aa10.6□□□□□ -0.71
SNX3-204ENST00000426155 TAGLNQ01995 201 aaKnown RBP10.6□□□□□ -0.71
SNX3-204ENST00000426155 FXYD3Q14802 87 aa10.6□□□□□ -0.71
SNX3-204ENST00000426155 CDK10Q15131 360 aa10.6□□□□□ -0.71
SNX3-204ENST00000426155 NDUFA5Q16718 116 aa10.6□□□□□ -0.71
SNX3-204ENST00000426155 RNASE12Q5GAN4 147 aaKnown RBP10.6□□□□□ -0.71
SNX3-204ENST00000426155 UNQ5815/PRO19632Q6UWF5 114 aa10.6□□□□□ -0.71
SNX3-204ENST00000426155 ZNF562Q6V9R5 426 aa10.6□□□□□ -0.71
SNX3-204ENST00000426155 TMEM17Q86X19 198 aa10.6□□□□□ -0.71
SNX3-204ENST00000426155 OR5AP2Q8NGF4 316 aa10.6□□□□□ -0.71
SNX3-204ENST00000426155 TCTEX1D2Q8WW35 142 aa10.6□□□□□ -0.71
SNX3-204ENST00000426155 EHFQ9NZC4 300 aa10.6□□□□□ -0.71
SNX3-204ENST00000426155 FOXA2Q9Y261 457 aaPredicted RBP10.6□□□□□ -0.71
SNX3-204ENST00000426155 SAA1P0DJI8 122 aaPredicted RBP10.59□□□□□ -0.71
SNX3-204ENST00000426155 APELAP0DMC3 54 aa10.59□□□□□ -0.71
SNX3-204ENST00000426155 RRASP10301 218 aa10.59□□□□□ -0.71
SNX3-204ENST00000426155 HOXD3P31249 432 aaPredicted RBP10.59□□□□□ -0.71
SNX3-204ENST00000426155 PRSS3P35030 304 aa10.59□□□□□ -0.71
SNX3-204ENST00000426155 MYCNOSP40205 109 aa10.59□□□□□ -0.71
SNX3-204ENST00000426155 LGALS7P47929 136 aa10.59□□□□□ -0.71
SNX3-204ENST00000426155 RFX2P48378 723 aa10.59□□□□□ -0.71
SNX3-204ENST00000426155 EIF2B2P49770 351 aaKnown RBP10.59□□□□□ -0.71
SNX3-204ENST00000426155 SMCPP49901 116 aaPredicted RBP10.59□□□□□ -0.71
SNX3-204ENST00000426155 RAB9AP51151 201 aa10.59□□□□□ -0.71
SNX3-204ENST00000426155 DEFA5Q01523 94 aa10.59□□□□□ -0.71
SNX3-204ENST00000426155 OXA1LQ15070 435 aa10.59□□□□□ -0.71
SNX3-204ENST00000426155 ACTBL2Q562R1 376 aa10.59□□□□□ -0.71
SNX3-204ENST00000426155 LCE2AQ5TA79 106 aaPredicted RBP10.59□□□□□ -0.71
SNX3-204ENST00000426155 ASPHD1Q5U4P2 390 aa10.59□□□□□ -0.71
SNX3-204ENST00000426155 TMEM65Q6PI78 240 aa10.59□□□□□ -0.71
SNX3-204ENST00000426155 OVCH2Q7RTZ1 564 aa10.59□□□□□ -0.71
SNX3-204ENST00000426155 VKORC1L1Q8N0U8 176 aa10.59□□□□□ -0.71
SNX3-204ENST00000426155 ZNF491Q8N8L2 437 aa10.59□□□□□ -0.71
SNX3-204ENST00000426155 C4orf3Q8WVX3 66 aa10.59□□□□□ -0.71
SNX3-204ENST00000426155 ACOT12Q8WYK0 555 aa10.59□□□□□ -0.71
SNX3-204ENST00000426155 MS4A10Q96PG2 267 aa10.59□□□□□ -0.71
SNX3-204ENST00000426155 NEURL2Q9BR09 285 aa10.59□□□□□ -0.71
SNX3-204ENST00000426155 SLC5A7Q9GZV3 580 aa10.59□□□□□ -0.71
SNX3-204ENST00000426155 FAM25AB3EWG3 89 aa10.58□□□□□ -0.72
SNX3-204ENST00000426155 FAM25CB3EWG5 89 aa10.58□□□□□ -0.72
SNX3-204ENST00000426155 FAM25GB3EWG6 89 aa10.58□□□□□ -0.72
SNX3-204ENST00000426155 CNIH1O95406 144 aa10.58□□□□□ -0.72
SNX3-204ENST00000426155 HLA-DMAP28067 261 aa10.58□□□□□ -0.72
SNX3-204ENST00000426155 CD40LGP29965 261 aa10.58□□□□□ -0.72
SNX3-204ENST00000426155 SLC6A1P30531 599 aa10.58□□□□□ -0.72
SNX3-204ENST00000426155 UBE2KP61086 200 aa10.58□□□□□ -0.72
SNX3-204ENST00000426155 VMA21Q3ZAQ7 101 aa10.58□□□□□ -0.72
SNX3-204ENST00000426155 C10orf55Q5SWW7 151 aa10.58□□□□□ -0.72
SNX3-204ENST00000426155 ZNF818PQ6ZRF7 136 aa10.58□□□□□ -0.72
SNX3-204ENST00000426155 MFSD4AQ8N468 514 aa10.58□□□□□ -0.72
SNX3-204ENST00000426155 GPX8Q8TED1 209 aa10.58□□□□□ -0.72
SNX3-204ENST00000426155 RCC1LQ96I51 464 aaKnown RBP10.58□□□□□ -0.72
SNX3-204ENST00000426155 UBE2E2Q96LR5 201 aa10.58□□□□□ -0.72
SNX3-204ENST00000426155 I3L521 148 aa10.57□□□□□ -0.72
SNX3-204ENST00000426155 RAMP3O60896 148 aa10.57□□□□□ -0.72
SNX3-204ENST00000426155 SLC22A5O76082 557 aa10.57□□□□□ -0.72
SNX3-204ENST00000426155 IGHV3-11P01762 117 aa10.57□□□□□ -0.72
SNX3-204ENST00000426155 NAT1P18440 290 aa10.57□□□□□ -0.72
SNX3-204ENST00000426155 S100A1P23297 94 aa10.57□□□□□ -0.72
SNX3-204ENST00000426155 HRH1P35367 487 aa10.57□□□□□ -0.72
SNX3-204ENST00000426155 KRTAP10-11P60412 298 aa10.57□□□□□ -0.72
SNX3-204ENST00000426155 FHL3Q13643 280 aa10.57□□□□□ -0.72
SNX3-204ENST00000426155 TNXAQ16473 311 aa10.57□□□□□ -0.72
SNX3-204ENST00000426155 PRSS8Q16651 343 aa10.57□□□□□ -0.72
SNX3-204ENST00000426155 AKIRIN2Q53H80 203 aa10.57□□□□□ -0.72
SNX3-204ENST00000426155 LYSMD2Q8IV50 215 aa10.57□□□□□ -0.72
SNX3-204ENST00000426155 OR5T1Q8NG75 326 aa10.57□□□□□ -0.72
SNX3-204ENST00000426155 OR11H1Q8NG94 326 aa10.57□□□□□ -0.72
SNX3-204ENST00000426155 OR5H2Q8NGV7 314 aa10.57□□□□□ -0.72
SNX3-204ENST00000426155 OSR1Q8TAX0 266 aaPredicted RBP10.57□□□□□ -0.72
SNX3-204ENST00000426155 GIMAP1Q8WWP7 306 aa10.57□□□□□ -0.72
SNX3-204ENST00000426155 CMTM3Q96MX0 182 aa10.57□□□□□ -0.72
SNX3-204ENST00000426155 HSD17B10Q99714 261 aaKnown RBP10.57□□□□□ -0.72
SNX3-204ENST00000426155 ZNF2Q9BSG1 426 aaPredicted RBP10.57□□□□□ -0.72
SNX3-204ENST00000426155 FXYD6Q9H0Q3 95 aa10.57□□□□□ -0.72
SNX3-204ENST00000426155 MIXL1Q9H2W2 232 aa10.57□□□□□ -0.72
SNX3-204ENST00000426155 ZNF430Q9H8G1 570 aaPredicted RBP10.57□□□□□ -0.72
SNX3-204ENST00000426155 AKIP1Q9NQ31 210 aa10.57□□□□□ -0.72
SNX3-204ENST00000426155 AURKAIP1Q9NWT8 199 aaPredicted RBP10.57□□□□□ -0.72
SNX3-204ENST00000426155 VSIG4Q9Y279 399 aa10.57□□□□□ -0.72
SNX3-204ENST00000426155 PRELID3BQ9Y3B1 194 aa10.57□□□□□ -0.72
SNX3-204ENST00000426155 PPP5CP53041 499 aa10.56□□□□□ -0.72
SNX3-204ENST00000426155 TPPP2P59282 170 aa10.56□□□□□ -0.72
SNX3-204ENST00000426155 HERV-K104P61576 105 aa10.56□□□□□ -0.72
SNX3-204ENST00000426155 TMEM267Q0VDI3 215 aaPredicted RBP10.56□□□□□ -0.72
SNX3-204ENST00000426155 DYRK1AQ13627 763 aa10.56□□□□□ -0.72
SNX3-204ENST00000426155 MZT2AQ6P582 158 aa10.56□□□□□ -0.72
SNX3-204ENST00000426155 ZNF66Q6ZN08 573 aa10.56□□□□□ -0.72
SNX3-204ENST00000426155 LAX1Q8IWV1 398 aa10.56□□□□□ -0.72
SNX3-204ENST00000426155 TCTEX1D1Q8N7M0 179 aa10.56□□□□□ -0.72
SNX3-204ENST00000426155 TEX45Q8NA69 505 aa10.56□□□□□ -0.72
SNX3-204ENST00000426155 OR5M8Q8NGP6 311 aa10.56□□□□□ -0.72
SNX3-204ENST00000426155 OR51H1Q8NH63 302 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms