RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 CMTM3Q96MX0 182 aa13.56□□□□□ -0.24
SLC6A1-202ENST00000425938 APOA1P02647 267 aa13.55□□□□□ -0.24
SLC6A1-202ENST00000425938 SAA1P0DJI8 122 aaPredicted RBP13.55□□□□□ -0.24
SLC6A1-202ENST00000425938 PRSS3P35030 304 aa13.55□□□□□ -0.24
SLC6A1-202ENST00000425938 RORCP51449 518 aa13.55□□□□□ -0.24
SLC6A1-202ENST00000425938 FXYD4P59646 89 aa13.55□□□□□ -0.24
SLC6A1-202ENST00000425938 HERV-K104P61576 105 aa13.55□□□□□ -0.24
SLC6A1-202ENST00000425938 TNXAQ16473 311 aa13.55□□□□□ -0.24
SLC6A1-202ENST00000425938 ANKRD13BQ86YJ7 626 aa13.55□□□□□ -0.24
SLC6A1-202ENST00000425938 MFSD4AQ8N468 514 aa13.55□□□□□ -0.24
SLC6A1-202ENST00000425938 ZBTB34Q8NCN2 500 aa13.55□□□□□ -0.24
SLC6A1-202ENST00000425938 MRPS26Q9BYN8 205 aaKnown RBP13.55□□□□□ -0.24
SLC6A1-202ENST00000425938 SLC5A7Q9GZV3 580 aa13.55□□□□□ -0.24
SLC6A1-202ENST00000425938 ALX4Q9H161 411 aaPredicted RBP13.55□□□□□ -0.24
SLC6A1-202ENST00000425938 CCL28Q9NRJ3 127 aa13.55□□□□□ -0.24
SLC6A1-202ENST00000425938 LINC01619G3V211 115 aa13.54□□□□□ -0.24
SLC6A1-202ENST00000425938 MPPED1O15442 326 aa13.54□□□□□ -0.24
SLC6A1-202ENST00000425938 IGHV3-11P01762 117 aa13.54□□□□□ -0.24
SLC6A1-202ENST00000425938 EIF4EP06730 217 aaKnown RBP13.54□□□□□ -0.24
SLC6A1-202ENST00000425938 KIR2DS2P43631 304 aa13.54□□□□□ -0.24
SLC6A1-202ENST00000425938 TAS2R46P59540 309 aa13.54□□□□□ -0.24
SLC6A1-202ENST00000425938 DGCR2P98153 550 aa13.54□□□□□ -0.24
SLC6A1-202ENST00000425938 EIF4EBP1Q13541 118 aaPredicted RBP13.54□□□□□ -0.24
SLC6A1-202ENST00000425938 ASPHD1Q5U4P2 390 aa13.54□□□□□ -0.24
SLC6A1-202ENST00000425938 MMD2Q8IY49 270 aa13.54□□□□□ -0.24
SLC6A1-202ENST00000425938 VSTM2AQ8TAG5 236 aa13.54□□□□□ -0.24
SLC6A1-202ENST00000425938 GIMAP1Q8WWP7 306 aa13.54□□□□□ -0.24
SLC6A1-202ENST00000425938 AP3S1Q92572 193 aa13.54□□□□□ -0.24
SLC6A1-202ENST00000425938 BORCS5Q969J3 196 aa13.54□□□□□ -0.24
SLC6A1-202ENST00000425938 EHFQ9NZC4 300 aa13.54□□□□□ -0.24
SLC6A1-202ENST00000425938 A0A0G2JLM5 398 aa13.53□□□□□ -0.24
SLC6A1-202ENST00000425938 C13orf42A0A1B0GVH6 325 aa13.53□□□□□ -0.24
SLC6A1-202ENST00000425938 WI2-2373I1.2A0A1W2PRP0 233 aa13.53□□□□□ -0.24
SLC6A1-202ENST00000425938 MSGN1A6NI15 193 aa13.53□□□□□ -0.24
SLC6A1-202ENST00000425938 K7EIL1 84 aa13.53□□□□□ -0.24
SLC6A1-202ENST00000425938 TNFSF12O43508 249 aa13.53□□□□□ -0.24
SLC6A1-202ENST00000425938 RAMP3O60896 148 aa13.53□□□□□ -0.24
SLC6A1-202ENST00000425938 GABARAPO95166 117 aa13.53□□□□□ -0.24
SLC6A1-202ENST00000425938 CATR1Q13166 79 aa13.53□□□□□ -0.24
SLC6A1-202ENST00000425938 MRGPRG-AS1Q2M3A8 158 aa13.53□□□□□ -0.24
SLC6A1-202ENST00000425938 MZT2AQ6P582 158 aa13.53□□□□□ -0.24
SLC6A1-202ENST00000425938 OR5H2Q8NGV7 314 aa13.53□□□□□ -0.24
SLC6A1-202ENST00000425938 SRSF12Q8WXF0 261 aaKnown RBP13.53□□□□□ -0.24
SLC6A1-202ENST00000425938 RHOVQ96L33 236 aa13.53□□□□□ -0.24
SLC6A1-202ENST00000425938 ZNF430Q9H8G1 570 aaPredicted RBP13.53□□□□□ -0.24
SLC6A1-202ENST00000425938 ANAPC10Q9UM13 185 aa13.53□□□□□ -0.24
SLC6A1-202ENST00000425938 OVOL1O14753 267 aa13.52□□□□□ -0.25
SLC6A1-202ENST00000425938 OR2A4O95047 310 aa13.52□□□□□ -0.25
SLC6A1-202ENST00000425938 HRASP01112 189 aa13.52□□□□□ -0.25
SLC6A1-202ENST00000425938 HSPB1P04792 205 aaKnown RBP13.52□□□□□ -0.25
SLC6A1-202ENST00000425938 INSL3P51460 131 aa13.52□□□□□ -0.25
SLC6A1-202ENST00000425938 DCTN2Q13561 401 aaKnown RBP13.52□□□□□ -0.25
SLC6A1-202ENST00000425938 CTF1Q16619 201 aa13.52□□□□□ -0.25
SLC6A1-202ENST00000425938 DEFB121Q5J5C9 76 aa13.52□□□□□ -0.25
SLC6A1-202ENST00000425938 GPR107Q5VW38 600 aa13.52□□□□□ -0.25
SLC6A1-202ENST00000425938 GPR141Q7Z602 305 aa13.52□□□□□ -0.25
SLC6A1-202ENST00000425938 TMEM17Q86X19 198 aa13.52□□□□□ -0.25
SLC6A1-202ENST00000425938 DCUN1D4Q92564 292 aa13.52□□□□□ -0.25
SLC6A1-202ENST00000425938 OR2A7Q96R45 310 aa13.52□□□□□ -0.25
SLC6A1-202ENST00000425938 GPHA2Q96T91 129 aa13.52□□□□□ -0.25
SLC6A1-202ENST00000425938 SPIN2AQ99865 258 aa13.52□□□□□ -0.25
SLC6A1-202ENST00000425938 SPIN2BQ9BPZ2 258 aa13.52□□□□□ -0.25
SLC6A1-202ENST00000425938 AIFM2Q9BRQ8 373 aa13.52□□□□□ -0.25
SLC6A1-202ENST00000425938 NAA50Q9GZZ1 169 aaKnown RBP13.52□□□□□ -0.25
SLC6A1-202ENST00000425938 COA4Q9NYJ1 87 aa13.52□□□□□ -0.25
SLC6A1-202ENST00000425938 IGHV4OR15-8A0A075B7B6 117 aa13.51□□□□□ -0.25
SLC6A1-202ENST00000425938 A0A087WW49 117 aa13.51□□□□□ -0.25
SLC6A1-202ENST00000425938 BRI3O95415 125 aa13.51□□□□□ -0.25
SLC6A1-202ENST00000425938 PMP2P02689 132 aa13.51□□□□□ -0.25
SLC6A1-202ENST00000425938 OR9G9P0C7N8 305 aa13.51□□□□□ -0.25
SLC6A1-202ENST00000425938 APELAP0DMC3 54 aa13.51□□□□□ -0.25
SLC6A1-202ENST00000425938 NAT1P18440 290 aa13.51□□□□□ -0.25
SLC6A1-202ENST00000425938 RFX2P48378 723 aa13.51□□□□□ -0.25
SLC6A1-202ENST00000425938 SLURP1P55000 103 aa13.51□□□□□ -0.25
SLC6A1-202ENST00000425938 DYRK1AQ13627 763 aa13.51□□□□□ -0.25
SLC6A1-202ENST00000425938 VKORC1L1Q8N0U8 176 aa13.51□□□□□ -0.25
SLC6A1-202ENST00000425938 SPAG16Q8N0X2 631 aa13.51□□□□□ -0.25
SLC6A1-202ENST00000425938 TINAGL1Q9GZM7 467 aaPredicted RBP13.51□□□□□ -0.25
SLC6A1-202ENST00000425938 SCPEP1Q9HB40 452 aa13.51□□□□□ -0.25
SLC6A1-202ENST00000425938 FAM25AB3EWG3 89 aa13.5□□□□□ -0.25
SLC6A1-202ENST00000425938 FAM25CB3EWG5 89 aa13.5□□□□□ -0.25
SLC6A1-202ENST00000425938 FAM25GB3EWG6 89 aa13.5□□□□□ -0.25
SLC6A1-202ENST00000425938 RBFOX2O43251 390 aaKnown RBP eCLIP13.5□□□□□ -0.25
SLC6A1-202ENST00000425938 HPGDSO60760 199 aa13.5□□□□□ -0.25
SLC6A1-202ENST00000425938 KBTBD11O94819 623 aa13.5□□□□□ -0.25
SLC6A1-202ENST00000425938 ECI1P42126 302 aa13.5□□□□□ -0.25
SLC6A1-202ENST00000425938 DHRS11Q6UWP2 260 aa13.5□□□□□ -0.25
SLC6A1-202ENST00000425938 SNX29P2Q8IUI4 249 aa13.5□□□□□ -0.25
SLC6A1-202ENST00000425938 DLX4Q92988 240 aaPredicted RBP13.5□□□□□ -0.25
SLC6A1-202ENST00000425938 ZNF2Q9BSG1 426 aaPredicted RBP13.5□□□□□ -0.25
SLC6A1-202ENST00000425938 SCOCQ9UIL1 159 aa13.5□□□□□ -0.25
SLC6A1-202ENST00000425938 SULT1C2O00338 296 aa13.49□□□□□ -0.25
SLC6A1-202ENST00000425938 ZNF182P17025 639 aaPredicted RBP13.49□□□□□ -0.25
SLC6A1-202ENST00000425938 ELK1P19419 428 aa13.49□□□□□ -0.25
SLC6A1-202ENST00000425938 ZP3P21754 424 aa13.49□□□□□ -0.25
SLC6A1-202ENST00000425938 MAS1LP35410 378 aa13.49□□□□□ -0.25
SLC6A1-202ENST00000425938 BRWD1-AS2P59051 145 aa13.49□□□□□ -0.25
SLC6A1-202ENST00000425938 AADACL3Q5VUY0 350 aa13.49□□□□□ -0.25
SLC6A1-202ENST00000425938 ZNF818PQ6ZRF7 136 aa13.49□□□□□ -0.25
SLC6A1-202ENST00000425938 ZNF429Q86V71 674 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms