RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 ZNF137PP52743 207 aa7.75□□□□□ -1.17
HMGB4-201ENST00000425537 PAX9P55771 341 aa7.75□□□□□ -1.17
HMGB4-201ENST00000425537 DLX6P56179 175 aa7.75□□□□□ -1.17
HMGB4-201ENST00000425537 ATP5IP56385 69 aaPredicted RBP7.75□□□□□ -1.17
HMGB4-201ENST00000425537 RAB2AP61019 212 aa7.75□□□□□ -1.17
HMGB4-201ENST00000425537 GNB2P62879 340 aa7.75□□□□□ -1.17
HMGB4-201ENST00000425537 CLINT1Q14677 625 aa7.75□□□□□ -1.17
HMGB4-201ENST00000425537 AANATQ16613 207 aa7.75□□□□□ -1.17
HMGB4-201ENST00000425537 FAM74A1Q5RGS3 127 aa7.75□□□□□ -1.17
HMGB4-201ENST00000425537 WDR25Q64LD2 544 aaPredicted RBP7.75□□□□□ -1.17
HMGB4-201ENST00000425537 DPPA3Q6W0C5 159 aa7.75□□□□□ -1.17
HMGB4-201ENST00000425537 ZNF429Q86V71 674 aa7.75□□□□□ -1.17
HMGB4-201ENST00000425537 PDPNQ86YL7 162 aa7.75□□□□□ -1.17
HMGB4-201ENST00000425537 ABHD12Q8N2K0 398 aa7.75□□□□□ -1.17
HMGB4-201ENST00000425537 VSTM2AQ8TAG5 236 aa7.75□□□□□ -1.17
HMGB4-201ENST00000425537 LEAP2Q969E1 77 aa7.75□□□□□ -1.17
HMGB4-201ENST00000425537 RHOVQ96L33 236 aa7.75□□□□□ -1.17
HMGB4-201ENST00000425537 PSMG3-AS1Q96PY0 264 aa7.75□□□□□ -1.17
HMGB4-201ENST00000425537 ZNF251Q9BRH9 671 aa7.75□□□□□ -1.17
HMGB4-201ENST00000425537 PATZ1Q9HBE1 687 aaKnown RBP7.75□□□□□ -1.17
HMGB4-201ENST00000425537 PARP11Q9NR21 331 aa7.75□□□□□ -1.17
HMGB4-201ENST00000425537 A0A1W2PPE3 182 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 MFSD2BA6NFX1 497 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 LYNX1G3V0Z9 82 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 H7C2Y5 167 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 M0R1W7 72 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 SOX15O60248 233 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 FBXO24O75426 580 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 CST7O76096 145 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 NXPH3O95157 252 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 IGHV3-7P01780 117 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 PRH1P02810 166 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 OR8U8P0C7N1 319 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 LYNX1P0DP58 116 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 CAMLGP49069 296 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 F2RL1P55085 397 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 BRWD1-AS2P59051 145 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 RAB11AP62491 216 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 TLE4Q04727 773 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 IZUMO4Q1ZYL8 232 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 PDLIM3Q53GG5 364 aaPredicted RBP7.74□□□□□ -1.17
HMGB4-201ENST00000425537 SPANXN5Q5MJ07 72 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 SP5Q6BEB4 398 aaPredicted RBP7.74□□□□□ -1.17
HMGB4-201ENST00000425537 ZNF841Q6ZN19 808 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 TGIF2LXQ8IUE1 241 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 MRPL41Q8IXM3 137 aaKnown RBP7.74□□□□□ -1.17
HMGB4-201ENST00000425537 ODF3L1Q8IXM7 274 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 PUSL1Q8N0Z8 303 aaKnown RBP7.74□□□□□ -1.17
HMGB4-201ENST00000425537 HSD17B11Q8NBQ5 300 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 BEND2Q8NDZ0 799 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 OR10P1Q8NGE3 313 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 OR13D1Q8NGV5 346 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 OR4A5Q8NH83 315 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 PCNPQ8WW12 178 aaKnown RBP7.74□□□□□ -1.17
HMGB4-201ENST00000425537 CXorf58Q96LI9 332 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 SPOCK3Q9BQ16 436 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 CLEC7AQ9BXN2 247 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 MMP26Q9NRE1 261 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 TMEM140Q9NV12 185 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 ZNF257Q9Y2Q1 563 aa7.74□□□□□ -1.17
HMGB4-201ENST00000425537 C15orf61A6NNL5 157 aa7.73□□□□□ -1.17
HMGB4-201ENST00000425537 SHOXO15266 292 aa7.73□□□□□ -1.17
HMGB4-201ENST00000425537 MMP23AO75900 390 aa7.73□□□□□ -1.17
HMGB4-201ENST00000425537 TMEM50AO95807 157 aa7.73□□□□□ -1.17
HMGB4-201ENST00000425537 FAM157CP0CG43 387 aa7.73□□□□□ -1.17
HMGB4-201ENST00000425537 CT45A6P0DMU7 189 aa7.73□□□□□ -1.17
HMGB4-201ENST00000425537 CT45A5P0DMU8 189 aa7.73□□□□□ -1.17
HMGB4-201ENST00000425537 CT45A7P0DMV0 189 aa7.73□□□□□ -1.17
HMGB4-201ENST00000425537 COX6B1P14854 86 aa7.73□□□□□ -1.17
HMGB4-201ENST00000425537 CEACAM3P40198 252 aa7.73□□□□□ -1.17
HMGB4-201ENST00000425537 LGALS7P47929 136 aa7.73□□□□□ -1.17
HMGB4-201ENST00000425537 SLC38A11Q08AI6 406 aa7.73□□□□□ -1.17
HMGB4-201ENST00000425537 TMEM177Q53S58 311 aa7.73□□□□□ -1.17
HMGB4-201ENST00000425537 AKR1C8PQ5T2L2 129 aa7.73□□□□□ -1.17
HMGB4-201ENST00000425537 AVPI1Q5T686 147 aa7.73□□□□□ -1.17
HMGB4-201ENST00000425537 TMEM14EPQ6UXP3 125 aa7.73□□□□□ -1.17
HMGB4-201ENST00000425537 C1orf122Q6ZSJ8 110 aa7.73□□□□□ -1.17
HMGB4-201ENST00000425537 KIR3DL3Q8N743 410 aa7.73□□□□□ -1.17
HMGB4-201ENST00000425537 TMEM217Q8N7C4 229 aa7.73□□□□□ -1.17
HMGB4-201ENST00000425537 ZNF383Q8NA42 475 aa7.73□□□□□ -1.17
HMGB4-201ENST00000425537 LY6G5BQ8NDX9 201 aa7.73□□□□□ -1.17
HMGB4-201ENST00000425537 LFNGQ8NES3 379 aa7.73□□□□□ -1.17
HMGB4-201ENST00000425537 OR5AN1Q8NGI8 311 aa7.73□□□□□ -1.17
HMGB4-201ENST00000425537 OR4C13Q8NGP0 309 aa7.73□□□□□ -1.17
HMGB4-201ENST00000425537 OR2G3Q8NGZ4 309 aa7.73□□□□□ -1.17
HMGB4-201ENST00000425537 LHX4Q969G2 390 aa7.73□□□□□ -1.17
HMGB4-201ENST00000425537 FLYWCH2Q96CP2 140 aaKnown RBP7.73□□□□□ -1.17
HMGB4-201ENST00000425537 PSMG3Q9BT73 122 aaPredicted RBP7.73□□□□□ -1.17
HMGB4-201ENST00000425537 TMEM147Q9BVK8 224 aa7.73□□□□□ -1.17
HMGB4-201ENST00000425537 SSBP3Q9BWW4 388 aaPredicted RBP7.73□□□□□ -1.17
HMGB4-201ENST00000425537 WFDC1Q9HC57 220 aa7.73□□□□□ -1.17
HMGB4-201ENST00000425537 HEYLQ9NQ87 328 aaPredicted RBP7.73□□□□□ -1.17
HMGB4-201ENST00000425537 BET1LQ9NYM9 111 aa7.73□□□□□ -1.17
HMGB4-201ENST00000425537 FOXA2Q9Y261 457 aaPredicted RBP7.73□□□□□ -1.17
HMGB4-201ENST00000425537 WASHC3Q9Y3C0 194 aa7.73□□□□□ -1.17
HMGB4-201ENST00000425537 LOC105371242A0A075B767 164 aa7.72□□□□□ -1.17
HMGB4-201ENST00000425537 BTBD17A6NE02 478 aa7.72□□□□□ -1.17
HMGB4-201ENST00000425537 CYSRT1A8MQ03 144 aa7.72□□□□□ -1.17
HMGB4-201ENST00000425537 A8MXK9 166 aa7.72□□□□□ -1.17
HMGB4-201ENST00000425537 H3BP45 60 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms