RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 PATZ1Q9HBE1 687 aaKnown RBP21.59■■□□□ 1.05
LDB1-202ENST00000425280 A0A1W2PPH5 198 aa21.59■■□□□ 1.05
LDB1-202ENST00000425280 REG1BP48304 166 aa21.59■■□□□ 1.05
LDB1-202ENST00000425280 DIAPH2-AS1Q14236 149 aa21.59■■□□□ 1.05
LDB1-202ENST00000425280 PXDC1Q5TGL8 231 aa21.59■■□□□ 1.05
LDB1-202ENST00000425280 OR13D1Q8NGV5 346 aa21.59■■□□□ 1.05
LDB1-202ENST00000425280 RFNGQ9Y644 331 aa21.59■■□□□ 1.05
LDB1-202ENST00000425280 HRASP01112 189 aa21.58■■□□□ 1.05
LDB1-202ENST00000425280 IFNA17P01571 189 aa21.58■■□□□ 1.05
LDB1-202ENST00000425280 ZNF137PP52743 207 aa21.58■■□□□ 1.05
LDB1-202ENST00000425280 LY6G5BQ8NDX9 201 aa21.58■■□□□ 1.05
LDB1-202ENST00000425280 C22orf46C9J442 243 aa21.57■■□□□ 1.04
LDB1-202ENST00000425280 RNF224P0DH78 156 aa21.57■■□□□ 1.04
LDB1-202ENST00000425280 DLX1P56177 255 aa21.57■■□□□ 1.04
LDB1-202ENST00000425280 SPCS3P61009 180 aa21.57■■□□□ 1.04
LDB1-202ENST00000425280 HBG1P69891 147 aa21.57■■□□□ 1.04
LDB1-202ENST00000425280 HBG2P69892 147 aa21.57■■□□□ 1.04
LDB1-202ENST00000425280 ZNF525Q8N782 197 aa21.57■■□□□ 1.04
LDB1-202ENST00000425280 OR5AN1Q8NGI8 311 aa21.57■■□□□ 1.04
LDB1-202ENST00000425280 OR52E5Q8NH55 327 aa21.57■■□□□ 1.04
LDB1-202ENST00000425280 MARC2Q969Z3 335 aa21.57■■□□□ 1.04
LDB1-202ENST00000425280 NARFLQ9H6Q4 476 aa21.57■■□□□ 1.04
LDB1-202ENST00000425280 H0YJW9 148 aa21.57■■□□□ 1.04
LDB1-202ENST00000425280 RBP4P02753 201 aa21.57■■□□□ 1.04
LDB1-202ENST00000425280 BLOC1S1P78537 153 aa21.57■■□□□ 1.04
LDB1-202ENST00000425280 STRAPQ9Y3F4 350 aaKnown RBP21.57■■□□□ 1.04
LDB1-202ENST00000425280 APOA2P02652 100 aa21.56■■□□□ 1.04
LDB1-202ENST00000425280 EFNA4P52798 201 aa21.56■■□□□ 1.04
LDB1-202ENST00000425280 GNB2P62879 340 aa21.56■■□□□ 1.04
LDB1-202ENST00000425280 PDLIM3Q53GG5 364 aaPredicted RBP21.56■■□□□ 1.04
LDB1-202ENST00000425280 PARP11Q9NR21 331 aa21.56■■□□□ 1.04
LDB1-202ENST00000425280 CACFD1Q9UGQ2 172 aa21.56■■□□□ 1.04
LDB1-202ENST00000425280 IGHV2-26A0A0B4J1V2 119 aa21.56■■□□□ 1.04
LDB1-202ENST00000425280 C15orf61A6NNL5 157 aa21.56■■□□□ 1.04
LDB1-202ENST00000425280 SRRM4A7MD48 611 aaKnown RBP21.56■■□□□ 1.04
LDB1-202ENST00000425280 GPR6P46095 362 aaPredicted RBP21.56■■□□□ 1.04
LDB1-202ENST00000425280 Q6ZRG5 221 aa21.56■■□□□ 1.04
LDB1-202ENST00000425280 ZNF429Q86V71 674 aa21.56■■□□□ 1.04
LDB1-202ENST00000425280 TSNAXQ99598 290 aaKnown RBP21.56■■□□□ 1.04
LDB1-202ENST00000425280 NABP2Q9BQ15 211 aa21.56■■□□□ 1.04
LDB1-202ENST00000425280 NUP50Q9UKX7 468 aa21.56■■□□□ 1.04
LDB1-202ENST00000425280 RUNX1Q01196 453 aa21.55■■□□□ 1.04
LDB1-202ENST00000425280 TAGLNQ01995 201 aaKnown RBP21.55■■□□□ 1.04
LDB1-202ENST00000425280 OR8G2PQ6IF36 304 aa21.55■■□□□ 1.04
LDB1-202ENST00000425280 TMEM182Q6ZP80 229 aaPredicted RBP21.55■■□□□ 1.04
LDB1-202ENST00000425280 OR2G3Q8NGZ4 309 aa21.55■■□□□ 1.04
LDB1-202ENST00000425280 HRH4Q9H3N8 390 aa21.55■■□□□ 1.04
LDB1-202ENST00000425280 IFNA5P01569 189 aa21.54■■□□□ 1.04
LDB1-202ENST00000425280 LIPFP07098 398 aa21.54■■□□□ 1.04
LDB1-202ENST00000425280 IL6RP08887 468 aaPredicted RBP21.54■■□□□ 1.04
LDB1-202ENST00000425280 PRB3Q04118 309 aaPredicted RBP21.54■■□□□ 1.04
LDB1-202ENST00000425280 LILRB2Q8N423 598 aa21.54■■□□□ 1.04
LDB1-202ENST00000425280 ZNF843Q8N446 348 aa21.54■■□□□ 1.04
LDB1-202ENST00000425280 TNFRSF14Q92956 283 aa21.54■■□□□ 1.04
LDB1-202ENST00000425280 GNPNAT1Q96EK6 184 aaPredicted RBP21.54■■□□□ 1.04
LDB1-202ENST00000425280 MMP26Q9NRE1 261 aa21.54■■□□□ 1.04
LDB1-202ENST00000425280 FOXA2Q9Y261 457 aaPredicted RBP21.54■■□□□ 1.04
LDB1-202ENST00000425280 TET2Q6N021 2002 aaPredicted RBP21.54■■□□□ 1.04
LDB1-202ENST00000425280 PMS2P5A8MQ11 134 aa21.54■■□□□ 1.04
LDB1-202ENST00000425280 C1QL1O75973 258 aa21.54■■□□□ 1.04
LDB1-202ENST00000425280 SLC38A11Q08AI6 406 aa21.54■■□□□ 1.04
LDB1-202ENST00000425280 BTNL8Q6UX41 500 aa21.54■■□□□ 1.04
LDB1-202ENST00000425280 LINC00052Q96N35 136 aa21.54■■□□□ 1.04
LDB1-202ENST00000425280 SSBP3Q9BWW4 388 aaPredicted RBP21.54■■□□□ 1.04
LDB1-202ENST00000425280 TMEM14BQ9NUH8 114 aa21.54■■□□□ 1.04
LDB1-202ENST00000425280 ONECUT1Q9UBC0 465 aa21.54■■□□□ 1.04
LDB1-202ENST00000425280 RAB19A4D1S5 217 aa21.53■■□□□ 1.04
LDB1-202ENST00000425280 H7C2Y5 167 aa21.53■■□□□ 1.04
LDB1-202ENST00000425280 RAB5CP51148 216 aa21.53■■□□□ 1.04
LDB1-202ENST00000425280 TCF19Q9Y242 345 aa21.53■■□□□ 1.04
LDB1-202ENST00000425280 OVOL3O00110 214 aa21.52■■□□□ 1.04
LDB1-202ENST00000425280 IGLV1-47P01700 117 aa21.52■■□□□ 1.04
LDB1-202ENST00000425280 IL3RAP26951 378 aa21.52■■□□□ 1.04
LDB1-202ENST00000425280 FHITP49789 147 aa21.52■■□□□ 1.04
LDB1-202ENST00000425280 TGIF2LXQ8IUE1 241 aa21.52■■□□□ 1.04
LDB1-202ENST00000425280 OSR1Q8TAX0 266 aaPredicted RBP21.52■■□□□ 1.04
LDB1-202ENST00000425280 CLEC7AQ9BXN2 247 aa21.52■■□□□ 1.04
LDB1-202ENST00000425280 SHOXO15266 292 aa21.52■■□□□ 1.04
LDB1-202ENST00000425280 GOSR1O95249 250 aa21.52■■□□□ 1.04
LDB1-202ENST00000425280 VDAC2P45880 294 aaPredicted RBP21.52■■□□□ 1.04
LDB1-202ENST00000425280 PRRX1P54821 245 aa21.52■■□□□ 1.04
LDB1-202ENST00000425280 TMEM177Q53S58 311 aa21.52■■□□□ 1.04
LDB1-202ENST00000425280 NUDT19A8MXV4 375 aa21.51■■□□□ 1.03
LDB1-202ENST00000425280 LY86O95711 162 aa21.51■■□□□ 1.03
LDB1-202ENST00000425280 ARG1P05089 322 aa21.51■■□□□ 1.03
LDB1-202ENST00000425280 ZP3P21754 424 aa21.51■■□□□ 1.03
LDB1-202ENST00000425280 HLA-DRB5Q30154 266 aa21.51■■□□□ 1.03
LDB1-202ENST00000425280 SLC25A24Q6NUK1 477 aa21.51■■□□□ 1.03
LDB1-202ENST00000425280 PCGF1Q9BSM1 259 aa21.51■■□□□ 1.03
LDB1-202ENST00000425280 LOC105371242A0A075B767 164 aa21.51■■□□□ 1.03
LDB1-202ENST00000425280 hCG_1809904A0A1W2PP81 198 aa21.51■■□□□ 1.03
LDB1-202ENST00000425280 A0A1W2PPE2 198 aa21.51■■□□□ 1.03
LDB1-202ENST00000425280 A0A1W2PR64 198 aa21.51■■□□□ 1.03
LDB1-202ENST00000425280 A0A1W2PRV1 198 aa21.51■■□□□ 1.03
LDB1-202ENST00000425280 C15orf62A8K5M9 175 aa21.51■■□□□ 1.03
LDB1-202ENST00000425280 UPK2O00526 184 aa21.51■■□□□ 1.03
LDB1-202ENST00000425280 PRH1P02810 166 aa21.51■■□□□ 1.03
LDB1-202ENST00000425280 CAMLGP49069 296 aa21.51■■□□□ 1.03
LDB1-202ENST00000425280 RPS16P62249 146 aaKnown RBP21.51■■□□□ 1.03
LDB1-202ENST00000425280 IL34Q6ZMJ4 242 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms