RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 OR5B12Q96R08 314 aa10.04□□□□□ -0.8
VRK3-203ENST00000424804 GPHA2Q96T91 129 aa10.04□□□□□ -0.8
VRK3-203ENST00000424804 ASCL2Q99929 193 aa10.04□□□□□ -0.8
VRK3-203ENST00000424804 RNF5Q99942 180 aa10.04□□□□□ -0.8
VRK3-203ENST00000424804 SLC5A7Q9GZV3 580 aa10.04□□□□□ -0.8
VRK3-203ENST00000424804 CCL28Q9NRJ3 127 aa10.04□□□□□ -0.8
VRK3-203ENST00000424804 RBMX2Q9Y388 322 aaKnown RBP10.04□□□□□ -0.8
VRK3-203ENST00000424804 PRELID3BQ9Y3B1 194 aa10.04□□□□□ -0.8
VRK3-203ENST00000424804 TENM2Q9NT68 2774 aa10.04□□□□□ -0.8
VRK3-203ENST00000424804 RGS5O15539 181 aa10.03□□□□□ -0.8
VRK3-203ENST00000424804 SLC22A5O76082 557 aa10.03□□□□□ -0.8
VRK3-203ENST00000424804 PPYP01298 95 aa10.03□□□□□ -0.8
VRK3-203ENST00000424804 HLA-DMAP28067 261 aa10.03□□□□□ -0.8
VRK3-203ENST00000424804 RFX2P48378 723 aa10.03□□□□□ -0.8
VRK3-203ENST00000424804 HERV-K104P61576 105 aa10.03□□□□□ -0.8
VRK3-203ENST00000424804 RPL30P62888 115 aaKnown RBP10.03□□□□□ -0.8
VRK3-203ENST00000424804 TAGLNQ01995 201 aaKnown RBP10.03□□□□□ -0.8
VRK3-203ENST00000424804 FXYD3Q14802 87 aa10.03□□□□□ -0.8
VRK3-203ENST00000424804 SPCS2Q15005 226 aa10.03□□□□□ -0.8
VRK3-203ENST00000424804 VMA21Q3ZAQ7 101 aa10.03□□□□□ -0.8
VRK3-203ENST00000424804 ZNF660Q6AZW8 331 aaPredicted RBP10.03□□□□□ -0.8
VRK3-203ENST00000424804 UNQ5815/PRO19632Q6UWF5 114 aa10.03□□□□□ -0.8
VRK3-203ENST00000424804 IDO2Q6ZQW0 420 aa10.03□□□□□ -0.8
VRK3-203ENST00000424804 OR5H2Q8NGV7 314 aa10.03□□□□□ -0.8
VRK3-203ENST00000424804 ARPC1AQ92747 370 aa10.03□□□□□ -0.8
VRK3-203ENST00000424804 CCDC160A6NGH7 325 aa10.02□□□□□ -0.81
VRK3-203ENST00000424804 APELAP0DMC3 54 aa10.02□□□□□ -0.81
VRK3-203ENST00000424804 LGALS7P47929 136 aa10.02□□□□□ -0.81
VRK3-203ENST00000424804 RAB9AP51151 201 aa10.02□□□□□ -0.81
VRK3-203ENST00000424804 CRIP2P52943 208 aaPredicted RBP10.02□□□□□ -0.81
VRK3-203ENST00000424804 TMEM267Q0VDI3 215 aaPredicted RBP10.02□□□□□ -0.81
VRK3-203ENST00000424804 PJVKQ0ZLH3 352 aa10.02□□□□□ -0.81
VRK3-203ENST00000424804 TNXAQ16473 311 aa10.02□□□□□ -0.81
VRK3-203ENST00000424804 TMEM177Q53S58 311 aa10.02□□□□□ -0.81
VRK3-203ENST00000424804 LFNGQ8NES3 379 aa10.02□□□□□ -0.81
VRK3-203ENST00000424804 OR1N2Q8NGR9 330 aa10.02□□□□□ -0.81
VRK3-203ENST00000424804 DCUN1D4Q92564 292 aa10.02□□□□□ -0.81
VRK3-203ENST00000424804 MS4A10Q96PG2 267 aa10.02□□□□□ -0.81
VRK3-203ENST00000424804 PHB2Q99623 299 aa10.02□□□□□ -0.81
VRK3-203ENST00000424804 ALX4Q9H161 411 aaPredicted RBP10.02□□□□□ -0.81
VRK3-203ENST00000424804 ZNF355PQ9NSJ1 428 aa10.02□□□□□ -0.81
VRK3-203ENST00000424804 EXTL2Q9UBQ6 330 aa10.02□□□□□ -0.81
VRK3-203ENST00000424804 ZNF256Q9Y2P7 627 aaPredicted RBP10.02□□□□□ -0.81
VRK3-203ENST00000424804 SRRM4A7MD48 611 aaKnown RBP10.01□□□□□ -0.81
VRK3-203ENST00000424804 IGLV2-14P01704 120 aa10.01□□□□□ -0.81
VRK3-203ENST00000424804 IGLV2-23P01705 113 aa10.01□□□□□ -0.81
VRK3-203ENST00000424804 RPL5P46777 297 aaKnown RBP10.01□□□□□ -0.81
VRK3-203ENST00000424804 ACTBL2Q562R1 376 aa10.01□□□□□ -0.81
VRK3-203ENST00000424804 ZNF562Q6V9R5 426 aa10.01□□□□□ -0.81
VRK3-203ENST00000424804 MFSD4AQ8N468 514 aa10.01□□□□□ -0.81
VRK3-203ENST00000424804 RAB2BQ8WUD1 216 aa10.01□□□□□ -0.81
VRK3-203ENST00000424804 DDB2Q92466 427 aa10.01□□□□□ -0.81
VRK3-203ENST00000424804 CMTM3Q96MX0 182 aa10.01□□□□□ -0.81
VRK3-203ENST00000424804 HSD17B10Q99714 261 aaKnown RBP10.01□□□□□ -0.81
VRK3-203ENST00000424804 ZNF2Q9BSG1 426 aaPredicted RBP10.01□□□□□ -0.81
VRK3-203ENST00000424804 FOXA2Q9Y261 457 aaPredicted RBP10.01□□□□□ -0.81
VRK3-203ENST00000424804 VSIG4Q9Y279 399 aa10.01□□□□□ -0.81
VRK3-203ENST00000424804 NUBP2Q9Y5Y2 271 aa10.01□□□□□ -0.81
VRK3-203ENST00000424804 EPPK1P58107 5090 aaKnown RBP10.01□□□□□ -0.81
VRK3-203ENST00000424804 ARPC1BO15143 372 aaKnown RBP10□□□□□ -0.81
VRK3-203ENST00000424804 MPPED1O15442 326 aa10□□□□□ -0.81
VRK3-203ENST00000424804 CD40LGP29965 261 aa10□□□□□ -0.81
VRK3-203ENST00000424804 HRH1P35367 487 aa10□□□□□ -0.81
VRK3-203ENST00000424804 INSL3P51460 131 aa10□□□□□ -0.81
VRK3-203ENST00000424804 TAS2R46P59540 309 aa10□□□□□ -0.81
VRK3-203ENST00000424804 TSPAN5P62079 268 aa10□□□□□ -0.81
VRK3-203ENST00000424804 ZNF616Q08AN1 781 aa10□□□□□ -0.81
VRK3-203ENST00000424804 ZNF66Q6ZN08 573 aa10□□□□□ -0.81
VRK3-203ENST00000424804 SSX9Q7RTT3 188 aa10□□□□□ -0.81
VRK3-203ENST00000424804 SBSPONQ8IVN8 264 aa10□□□□□ -0.81
VRK3-203ENST00000424804 VKORC1L1Q8N0U8 176 aa10□□□□□ -0.81
VRK3-203ENST00000424804 OR5T1Q8NG75 326 aa10□□□□□ -0.81
VRK3-203ENST00000424804 OR4S2Q8NH73 311 aa10□□□□□ -0.81
VRK3-203ENST00000424804 OSR1Q8TAX0 266 aaPredicted RBP10□□□□□ -0.81
VRK3-203ENST00000424804 GPX8Q8TED1 209 aa10□□□□□ -0.81
VRK3-203ENST00000424804 DLX4Q92988 240 aaPredicted RBP10□□□□□ -0.81
VRK3-203ENST00000424804 SULT1C2O00338 296 aa9.99□□□□□ -0.81
VRK3-203ENST00000424804 ACTL6BO94805 426 aa9.99□□□□□ -0.81
VRK3-203ENST00000424804 IGHV3-11P01762 117 aa9.99□□□□□ -0.81
VRK3-203ENST00000424804 CRYGBP07316 175 aa9.99□□□□□ -0.81
VRK3-203ENST00000424804 OR8U8P0C7N1 319 aa9.99□□□□□ -0.81
VRK3-203ENST00000424804 SAA1P0DJI8 122 aaPredicted RBP9.99□□□□□ -0.81
VRK3-203ENST00000424804 TMBIM6P55061 237 aa9.99□□□□□ -0.81
VRK3-203ENST00000424804 TPPP2P59282 170 aa9.99□□□□□ -0.81
VRK3-203ENST00000424804 UBE2KP61086 200 aa9.99□□□□□ -0.81
VRK3-203ENST00000424804 CATR1Q13166 79 aa9.99□□□□□ -0.81
VRK3-203ENST00000424804 DYRK1AQ13627 763 aa9.99□□□□□ -0.81
VRK3-203ENST00000424804 AADACL3Q5VUY0 350 aa9.99□□□□□ -0.81
VRK3-203ENST00000424804 ZNF818PQ6ZRF7 136 aa9.99□□□□□ -0.81
VRK3-203ENST00000424804 TCTEX1D1Q8N7M0 179 aa9.99□□□□□ -0.81
VRK3-203ENST00000424804 OR6F1Q8NGZ6 308 aa9.99□□□□□ -0.81
VRK3-203ENST00000424804 OR51H1Q8NH63 302 aa9.99□□□□□ -0.81
VRK3-203ENST00000424804 GIMAP1Q8WWP7 306 aa9.99□□□□□ -0.81
VRK3-203ENST00000424804 SCPEP1Q9HB40 452 aa9.99□□□□□ -0.81
VRK3-203ENST00000424804 C3orf84H3BNL1 204 aa9.98□□□□□ -0.81
VRK3-203ENST00000424804 M0QYG6 137 aa9.98□□□□□ -0.81
VRK3-203ENST00000424804 CTDSP2O14595 271 aa9.98□□□□□ -0.81
VRK3-203ENST00000424804 TRGV3P03979 118 aa9.98□□□□□ -0.81
VRK3-203ENST00000424804 SPNP16150 400 aa9.98□□□□□ -0.81
VRK3-203ENST00000424804 RCVRNP35243 200 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms