RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 VCX3AQ9NNX9 186 aa11.9□□□□□ -0.5
SPC24-201ENST00000423327 DIABLOQ9NR28 239 aa11.9□□□□□ -0.5
SPC24-201ENST00000423327 CCL28Q9NRJ3 127 aa11.9□□□□□ -0.5
SPC24-201ENST00000423327 LSM4Q9Y4Z0 139 aaKnown RBP11.9□□□□□ -0.5
SPC24-201ENST00000423327 HUWE1Q7Z6Z7 4374 aaKnown RBP11.89□□□□□ -0.51
SPC24-201ENST00000423327 MSGN1A6NI15 193 aa11.89□□□□□ -0.51
SPC24-201ENST00000423327 RAMP3O60896 148 aa11.89□□□□□ -0.51
SPC24-201ENST00000423327 SLC22A5O76082 557 aa11.89□□□□□ -0.51
SPC24-201ENST00000423327 BRI3O95415 125 aa11.89□□□□□ -0.51
SPC24-201ENST00000423327 PPYP01298 95 aa11.89□□□□□ -0.51
SPC24-201ENST00000423327 HSPB1P04792 205 aaKnown RBP11.89□□□□□ -0.51
SPC24-201ENST00000423327 EIF4EP06730 217 aaKnown RBP11.89□□□□□ -0.51
SPC24-201ENST00000423327 TAS2R20P59543 309 aa11.89□□□□□ -0.51
SPC24-201ENST00000423327 VBP1P61758 197 aa11.89□□□□□ -0.51
SPC24-201ENST00000423327 DYRK1AQ13627 763 aa11.89□□□□□ -0.51
SPC24-201ENST00000423327 CDK10Q15131 360 aa11.89□□□□□ -0.51
SPC24-201ENST00000423327 CROCCP3Q8IVE0 287 aa11.89□□□□□ -0.51
SPC24-201ENST00000423327 MFSD4AQ8N468 514 aa11.89□□□□□ -0.51
SPC24-201ENST00000423327 SAMD12Q8N8I0 201 aa11.89□□□□□ -0.51
SPC24-201ENST00000423327 ADAD2Q8NCV1 583 aaKnown RBP11.89□□□□□ -0.51
SPC24-201ENST00000423327 SECTM1Q8WVN6 248 aa11.89□□□□□ -0.51
SPC24-201ENST00000423327 TCTEX1D2Q8WW35 142 aa11.89□□□□□ -0.51
SPC24-201ENST00000423327 HSD17B10Q99714 261 aaKnown RBP11.89□□□□□ -0.51
SPC24-201ENST00000423327 TINAGL1Q9GZM7 467 aaPredicted RBP11.89□□□□□ -0.51
SPC24-201ENST00000423327 ZNF355PQ9NSJ1 428 aa11.89□□□□□ -0.51
SPC24-201ENST00000423327 TAS2R8Q9NYW2 309 aa11.89□□□□□ -0.51
SPC24-201ENST00000423327 A0A1B0GW64 132 aa11.88□□□□□ -0.51
SPC24-201ENST00000423327 TNFSF12O43508 249 aa11.88□□□□□ -0.51
SPC24-201ENST00000423327 TRBV12-3P01733 135 aa11.88□□□□□ -0.51
SPC24-201ENST00000423327 ZNF45Q02386 682 aa11.88□□□□□ -0.51
SPC24-201ENST00000423327 ACSM6Q6P461 480 aa11.88□□□□□ -0.51
SPC24-201ENST00000423327 PUSL1Q8N0Z8 303 aaKnown RBP11.88□□□□□ -0.51
SPC24-201ENST00000423327 ACOT12Q8WYK0 555 aa11.88□□□□□ -0.51
SPC24-201ENST00000423327 TMEM68Q96MH6 324 aa11.88□□□□□ -0.51
SPC24-201ENST00000423327 B9D2Q9BPU9 175 aa11.88□□□□□ -0.51
SPC24-201ENST00000423327 NAA50Q9GZZ1 169 aaKnown RBP11.88□□□□□ -0.51
SPC24-201ENST00000423327 PRELID3BQ9Y3B1 194 aa11.88□□□□□ -0.51
SPC24-201ENST00000423327 TEX22C9J3V5 150 aa11.87□□□□□ -0.51
SPC24-201ENST00000423327 E7EUB6 86 aa11.87□□□□□ -0.51
SPC24-201ENST00000423327 KBTBD11O94819 623 aa11.87□□□□□ -0.51
SPC24-201ENST00000423327 CBX5P45973 191 aa11.87□□□□□ -0.51
SPC24-201ENST00000423327 INSL3P51460 131 aa11.87□□□□□ -0.51
SPC24-201ENST00000423327 MSMO1Q15800 293 aa11.87□□□□□ -0.51
SPC24-201ENST00000423327 ZNF66Q6ZN08 573 aa11.87□□□□□ -0.51
SPC24-201ENST00000423327 ZNF818PQ6ZRF7 136 aa11.87□□□□□ -0.51
SPC24-201ENST00000423327 C19orf35Q6ZS72 473 aa11.87□□□□□ -0.51
SPC24-201ENST00000423327 OR5AP2Q8NGF4 316 aa11.87□□□□□ -0.51
SPC24-201ENST00000423327 OR4S2Q8NH73 311 aa11.87□□□□□ -0.51
SPC24-201ENST00000423327 COA4Q9NYJ1 87 aa11.87□□□□□ -0.51
SPC24-201ENST00000423327 ADAM30Q9UKF2 790 aa11.87□□□□□ -0.51
SPC24-201ENST00000423327 ZNF256Q9Y2P7 627 aaPredicted RBP11.87□□□□□ -0.51
SPC24-201ENST00000423327 MRPS7Q9Y2R9 242 aaKnown RBP11.87□□□□□ -0.51
SPC24-201ENST00000423327 SAP30O75446 220 aa11.86□□□□□ -0.51
SPC24-201ENST00000423327 PRH1P02810 166 aa11.86□□□□□ -0.51
SPC24-201ENST00000423327 OR9G9P0C7N8 305 aa11.86□□□□□ -0.51
SPC24-201ENST00000423327 NAT1P18440 290 aa11.86□□□□□ -0.51
SPC24-201ENST00000423327 CD40LGP29965 261 aa11.86□□□□□ -0.51
SPC24-201ENST00000423327 FXYD4P59646 89 aa11.86□□□□□ -0.51
SPC24-201ENST00000423327 TMEM69Q5SWH9 247 aa11.86□□□□□ -0.51
SPC24-201ENST00000423327 HAPLN4Q86UW8 402 aa11.86□□□□□ -0.51
SPC24-201ENST00000423327 ZNF429Q86V71 674 aa11.86□□□□□ -0.51
SPC24-201ENST00000423327 MMD2Q8IY49 270 aa11.86□□□□□ -0.51
SPC24-201ENST00000423327 TMEM167AQ8TBQ9 72 aa11.86□□□□□ -0.51
SPC24-201ENST00000423327 GIMAP1Q8WWP7 306 aa11.86□□□□□ -0.51
SPC24-201ENST00000423327 S100A16Q96FQ6 103 aaKnown RBP11.86□□□□□ -0.51
SPC24-201ENST00000423327 PHB2Q99623 299 aa11.86□□□□□ -0.51
SPC24-201ENST00000423327 DCUN1D5Q9BTE7 237 aa11.86□□□□□ -0.51
SPC24-201ENST00000423327 ZMAT5Q9UDW3 170 aaKnown RBP11.86□□□□□ -0.51
SPC24-201ENST00000423327 TRBV9A0A0B4J1U6 114 aa11.85□□□□□ -0.51
SPC24-201ENST00000423327 C13orf42A0A1B0GVH6 325 aa11.85□□□□□ -0.51
SPC24-201ENST00000423327 ANKRD34BA5PLL1 514 aa11.85□□□□□ -0.51
SPC24-201ENST00000423327 HMX3A6NHT5 357 aa11.85□□□□□ -0.51
SPC24-201ENST00000423327 CGB1A6NKQ9 187 aa11.85□□□□□ -0.51
SPC24-201ENST00000423327 IL6RP08887 468 aaPredicted RBP11.85□□□□□ -0.51
SPC24-201ENST00000423327 MYOD1P15172 320 aa11.85□□□□□ -0.51
SPC24-201ENST00000423327 RFX2P48378 723 aa11.85□□□□□ -0.51
SPC24-201ENST00000423327 ZNF343Q6P1L6 599 aa11.85□□□□□ -0.51
SPC24-201ENST00000423327 TMEM17Q86X19 198 aa11.85□□□□□ -0.51
SPC24-201ENST00000423327 KCTD12Q96CX2 325 aaKnown RBP11.85□□□□□ -0.51
SPC24-201ENST00000423327 SLC5A7Q9GZV3 580 aa11.85□□□□□ -0.51
SPC24-201ENST00000423327 IFT46Q9NQC8 304 aa11.85□□□□□ -0.51
SPC24-201ENST00000423327 A0A0G2JLM5 398 aa11.84□□□□□ -0.51
SPC24-201ENST00000423327 OR2A4O95047 310 aa11.84□□□□□ -0.51
SPC24-201ENST00000423327 GABARAPO95166 117 aa11.84□□□□□ -0.51
SPC24-201ENST00000423327 SPNP16150 400 aa11.84□□□□□ -0.51
SPC24-201ENST00000423327 GNRHRP30968 328 aa11.84□□□□□ -0.51
SPC24-201ENST00000423327 CD69Q07108 199 aa11.84□□□□□ -0.51
SPC24-201ENST00000423327 CTF1Q16619 201 aa11.84□□□□□ -0.51
SPC24-201ENST00000423327 IL34Q6ZMJ4 242 aa11.84□□□□□ -0.51
SPC24-201ENST00000423327 SSX9Q7RTT3 188 aa11.84□□□□□ -0.51
SPC24-201ENST00000423327 SPAG16Q8N0X2 631 aa11.84□□□□□ -0.51
SPC24-201ENST00000423327 TTC9CQ8N5M4 171 aa11.84□□□□□ -0.51
SPC24-201ENST00000423327 OR2A7Q96R45 310 aa11.84□□□□□ -0.51
SPC24-201ENST00000423327 FXYD6Q9H0Q3 95 aa11.84□□□□□ -0.51
SPC24-201ENST00000423327 AKIP1Q9NQ31 210 aa11.84□□□□□ -0.51
SPC24-201ENST00000423327 EHFQ9NZC4 300 aa11.84□□□□□ -0.51
SPC24-201ENST00000423327 COMMD3Q9UBI1 195 aa11.84□□□□□ -0.51
SPC24-201ENST00000423327 SULT1C2O00338 296 aa11.83□□□□□ -0.52
SPC24-201ENST00000423327 PMP2P02689 132 aa11.83□□□□□ -0.52
SPC24-201ENST00000423327 KIR2DS2P43631 304 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms