RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 OPN1MW3P0DN78 364 aa12.4□□□□□ -0.42
BRAT1-202ENST00000421712 PTBP1P26599 531 aaKnown RBP eCLIP12.4□□□□□ -0.42
BRAT1-202ENST00000421712 UCP3P55916 312 aa12.4□□□□□ -0.42
BRAT1-202ENST00000421712 PJVKQ0ZLH3 352 aa12.4□□□□□ -0.42
BRAT1-202ENST00000421712 FXYD3Q14802 87 aa12.4□□□□□ -0.42
BRAT1-202ENST00000421712 ECSCRQ19T08 205 aa12.4□□□□□ -0.42
BRAT1-202ENST00000421712 C2orf68Q2NKX9 166 aa12.4□□□□□ -0.42
BRAT1-202ENST00000421712 TEX38Q6PEX7 206 aa12.4□□□□□ -0.42
BRAT1-202ENST00000421712 ZNF562Q6V9R5 426 aa12.4□□□□□ -0.42
BRAT1-202ENST00000421712 VKORC1L1Q8N0U8 176 aa12.4□□□□□ -0.42
BRAT1-202ENST00000421712 TERB2Q8NHR7 220 aa12.4□□□□□ -0.42
BRAT1-202ENST00000421712 GRPEL2Q8TAA5 225 aa12.4□□□□□ -0.42
BRAT1-202ENST00000421712 CD300LFQ8TDQ1 290 aa12.4□□□□□ -0.42
BRAT1-202ENST00000421712 RSRP1Q9BUV0 290 aa12.4□□□□□ -0.42
BRAT1-202ENST00000421712 MCUBQ9NWR8 336 aa12.4□□□□□ -0.42
BRAT1-202ENST00000421712 TRAV41A0A0B4J266 112 aa12.39□□□□□ -0.43
BRAT1-202ENST00000421712 A6NHS1 94 aa12.39□□□□□ -0.43
BRAT1-202ENST00000421712 G3V318 75 aa12.39□□□□□ -0.43
BRAT1-202ENST00000421712 ACTL6BO94805 426 aa12.39□□□□□ -0.43
BRAT1-202ENST00000421712 CRYGBP07316 175 aa12.39□□□□□ -0.43
BRAT1-202ENST00000421712 SAA1P0DJI8 122 aaPredicted RBP12.39□□□□□ -0.43
BRAT1-202ENST00000421712 INPP1P49441 399 aa12.39□□□□□ -0.43
BRAT1-202ENST00000421712 BRWD1-AS2P59051 145 aa12.39□□□□□ -0.43
BRAT1-202ENST00000421712 AP3S2P59780 193 aa12.39□□□□□ -0.43
BRAT1-202ENST00000421712 CD83Q01151 205 aa12.39□□□□□ -0.43
BRAT1-202ENST00000421712 TMEM267Q0VDI3 215 aaPredicted RBP12.39□□□□□ -0.43
BRAT1-202ENST00000421712 ZNF79Q15937 498 aa12.39□□□□□ -0.43
BRAT1-202ENST00000421712 SSX9Q7RTT3 188 aa12.39□□□□□ -0.43
BRAT1-202ENST00000421712 TBC1D26Q86UD7 250 aa12.39□□□□□ -0.43
BRAT1-202ENST00000421712 NDUFA11Q86Y39 141 aa12.39□□□□□ -0.43
BRAT1-202ENST00000421712 TOMM5Q8N4H5 51 aa12.39□□□□□ -0.43
BRAT1-202ENST00000421712 COMMD1Q8N668 190 aa12.39□□□□□ -0.43
BRAT1-202ENST00000421712 OR4C16Q8NGL9 310 aa12.39□□□□□ -0.43
BRAT1-202ENST00000421712 ZFAND1Q8TCF1 268 aa12.39□□□□□ -0.43
BRAT1-202ENST00000421712 ARPC1AQ92747 370 aa12.39□□□□□ -0.43
BRAT1-202ENST00000421712 AIFM2Q9BRQ8 373 aa12.39□□□□□ -0.43
BRAT1-202ENST00000421712 FAM103A1Q9BTL3 118 aaKnown RBP12.39□□□□□ -0.43
BRAT1-202ENST00000421712 TSSC4Q9Y5U2 329 aaPredicted RBP12.39□□□□□ -0.43
BRAT1-202ENST00000421712 CREBL2O60519 120 aaPredicted RBP12.38□□□□□ -0.43
BRAT1-202ENST00000421712 OR2A4O95047 310 aa12.38□□□□□ -0.43
BRAT1-202ENST00000421712 HPRT1P00492 218 aa12.38□□□□□ -0.43
BRAT1-202ENST00000421712 ZNF735P0CB33 412 aa12.38□□□□□ -0.43
BRAT1-202ENST00000421712 PI3P19957 117 aa12.38□□□□□ -0.43
BRAT1-202ENST00000421712 FAUP35544 74 aaKnown RBP12.38□□□□□ -0.43
BRAT1-202ENST00000421712 ETV6P41212 452 aa12.38□□□□□ -0.43
BRAT1-202ENST00000421712 NDPQ00604 133 aa12.38□□□□□ -0.43
BRAT1-202ENST00000421712 TNXAQ16473 311 aa12.38□□□□□ -0.43
BRAT1-202ENST00000421712 TCTEX1D4Q5JR98 221 aa12.38□□□□□ -0.43
BRAT1-202ENST00000421712 CXorf66Q5JRM2 361 aaPredicted RBP12.38□□□□□ -0.43
BRAT1-202ENST00000421712 UNQ5815/PRO19632Q6UWF5 114 aa12.38□□□□□ -0.43
BRAT1-202ENST00000421712 LHFPL1Q86WI0 220 aa12.38□□□□□ -0.43
BRAT1-202ENST00000421712 VSTM2AQ8TAG5 236 aa12.38□□□□□ -0.43
BRAT1-202ENST00000421712 RHOVQ96L33 236 aa12.38□□□□□ -0.43
BRAT1-202ENST00000421712 OR2A7Q96R45 310 aa12.38□□□□□ -0.43
BRAT1-202ENST00000421712 PHB2Q99623 299 aa12.38□□□□□ -0.43
BRAT1-202ENST00000421712 PRRT1Q99946 306 aa12.38□□□□□ -0.43
BRAT1-202ENST00000421712 HRASLSQ9HDD0 168 aa12.38□□□□□ -0.43
BRAT1-202ENST00000421712 SCP2D1Q9UJQ7 156 aa12.38□□□□□ -0.43
BRAT1-202ENST00000421712 RBFOX2O43251 390 aaKnown RBP eCLIP12.37□□□□□ -0.43
BRAT1-202ENST00000421712 F2RP25116 425 aa12.37□□□□□ -0.43
BRAT1-202ENST00000421712 ECI1P42126 302 aa12.37□□□□□ -0.43
BRAT1-202ENST00000421712 LPAR6P43657 344 aa12.37□□□□□ -0.43
BRAT1-202ENST00000421712 PIGPP57054 158 aa12.37□□□□□ -0.43
BRAT1-202ENST00000421712 ERVK-16P61578 105 aa12.37□□□□□ -0.43
BRAT1-202ENST00000421712 PRSS8Q16651 343 aa12.37□□□□□ -0.43
BRAT1-202ENST00000421712 CNPY1Q3B7I2 92 aa12.37□□□□□ -0.43
BRAT1-202ENST00000421712 ZNF57Q68EA5 555 aaPredicted RBP12.37□□□□□ -0.43
BRAT1-202ENST00000421712 TMEM65Q6PI78 240 aa12.37□□□□□ -0.43
BRAT1-202ENST00000421712 MMD2Q8IY49 270 aa12.37□□□□□ -0.43
BRAT1-202ENST00000421712 LFNGQ8NES3 379 aa12.37□□□□□ -0.43
BRAT1-202ENST00000421712 DMBX1Q8NFW5 382 aa12.37□□□□□ -0.43
BRAT1-202ENST00000421712 OR51S1Q8NGJ8 323 aa12.37□□□□□ -0.43
BRAT1-202ENST00000421712 FAM110DQ8TAY7 271 aaPredicted RBP12.37□□□□□ -0.43
BRAT1-202ENST00000421712 MARCH1Q8TCQ1 289 aa12.37□□□□□ -0.43
BRAT1-202ENST00000421712 BATF3Q9NR55 127 aa12.37□□□□□ -0.43
BRAT1-202ENST00000421712 SLC2A9Q9NRM0 540 aa12.37□□□□□ -0.43
BRAT1-202ENST00000421712 COPZ2Q9P299 210 aa12.37□□□□□ -0.43
BRAT1-202ENST00000421712 C14orf166Q9Y224 244 aaKnown RBP12.37□□□□□ -0.43
BRAT1-202ENST00000421712 FBXO7Q9Y3I1 522 aa12.37□□□□□ -0.43
BRAT1-202ENST00000421712 ANK2Q01484 3957 aa12.37□□□□□ -0.43
BRAT1-202ENST00000421712 A0A1W2PN81 502 aa12.36□□□□□ -0.43
BRAT1-202ENST00000421712 NUDT19A8MXV4 375 aa12.36□□□□□ -0.43
BRAT1-202ENST00000421712 ARPC1BO15143 372 aaKnown RBP12.36□□□□□ -0.43
BRAT1-202ENST00000421712 MPPED1O15442 326 aa12.36□□□□□ -0.43
BRAT1-202ENST00000421712 S1PR2O95136 353 aa12.36□□□□□ -0.43
BRAT1-202ENST00000421712 TSPAN15O95858 294 aa12.36□□□□□ -0.43
BRAT1-202ENST00000421712 ELANEP08246 267 aa12.36□□□□□ -0.43
BRAT1-202ENST00000421712 PF4V1P10720 104 aa12.36□□□□□ -0.43
BRAT1-202ENST00000421712 RPA2P15927 270 aa12.36□□□□□ -0.43
BRAT1-202ENST00000421712 NQO2P16083 231 aa12.36□□□□□ -0.43
BRAT1-202ENST00000421712 CHRNA7P36544 502 aa12.36□□□□□ -0.43
BRAT1-202ENST00000421712 TAS2R31P59538 309 aa12.36□□□□□ -0.43
BRAT1-202ENST00000421712 FOXE3Q13461 319 aa12.36□□□□□ -0.43
BRAT1-202ENST00000421712 TRIQKQ629K1 86 aa12.36□□□□□ -0.43
BRAT1-202ENST00000421712 LCNL1Q6ZST4 164 aa12.36□□□□□ -0.43
BRAT1-202ENST00000421712 TCTEX1D1Q8N7M0 179 aa12.36□□□□□ -0.43
BRAT1-202ENST00000421712 CCDC71LQ8N9Z2 235 aa12.36□□□□□ -0.43
BRAT1-202ENST00000421712 OR13C8Q8NGS7 320 aa12.36□□□□□ -0.43
BRAT1-202ENST00000421712 R3HDM4Q96D70 268 aa12.36□□□□□ -0.43
BRAT1-202ENST00000421712 ZNF486Q96H40 463 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms