RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 CISD2Q8N5K1 135 aaKnown RBP12.66□□□□□ -0.38
SEMA3B-203ENST00000419007 ZNF114Q8NC26 417 aa12.66□□□□□ -0.38
SEMA3B-203ENST00000419007 SGMS2Q8NHU3 365 aa12.66□□□□□ -0.38
SEMA3B-203ENST00000419007 TAAR6Q96RI8 345 aa12.66□□□□□ -0.38
SEMA3B-203ENST00000419007 SPRR3Q9UBC9 169 aa12.66□□□□□ -0.38
SEMA3B-203ENST00000419007 GNG12Q9UBI6 72 aa12.66□□□□□ -0.38
SEMA3B-203ENST00000419007 MLNRO43193 412 aa12.66□□□□□ -0.38
SEMA3B-203ENST00000419007 TIMM8AO60220 97 aaPredicted RBP12.66□□□□□ -0.38
SEMA3B-203ENST00000419007 GCGP01275 180 aa12.66□□□□□ -0.38
SEMA3B-203ENST00000419007 TAS2R60P59551 318 aa12.66□□□□□ -0.38
SEMA3B-203ENST00000419007 PAX5Q02548 391 aa12.66□□□□□ -0.38
SEMA3B-203ENST00000419007 RNFT1Q5M7Z0 435 aa12.66□□□□□ -0.38
SEMA3B-203ENST00000419007 TCF23Q7RTU1 214 aa12.66□□□□□ -0.38
SEMA3B-203ENST00000419007 LURAP1Q96LR2 239 aa12.66□□□□□ -0.38
SEMA3B-203ENST00000419007 DDA1Q9BW61 102 aa12.66□□□□□ -0.38
SEMA3B-203ENST00000419007 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.65□□□□□ -0.38
SEMA3B-203ENST00000419007 C15orf62A8K5M9 175 aa12.65□□□□□ -0.38
SEMA3B-203ENST00000419007 VENTXO95231 258 aa12.65□□□□□ -0.38
SEMA3B-203ENST00000419007 OR9G9P0C7N8 305 aa12.65□□□□□ -0.38
SEMA3B-203ENST00000419007 IGHV1-2P23083 117 aa12.65□□□□□ -0.38
SEMA3B-203ENST00000419007 C21orf62-AS1Q17RA5 79 aa12.65□□□□□ -0.38
SEMA3B-203ENST00000419007 HCFC1P51610 2035 aa12.65□□□□□ -0.38
SEMA3B-203ENST00000419007 CD46P15529 392 aa12.65□□□□□ -0.38
SEMA3B-203ENST00000419007 CD82P27701 267 aa12.65□□□□□ -0.38
SEMA3B-203ENST00000419007 COA6Q5JTJ3 125 aaKnown RBP12.65□□□□□ -0.38
SEMA3B-203ENST00000419007 SLC35E4Q6ICL7 350 aa12.65□□□□□ -0.38
SEMA3B-203ENST00000419007 TGIF2LXQ8IUE1 241 aa12.65□□□□□ -0.38
SEMA3B-203ENST00000419007 TMEM256Q8N2U0 113 aa12.65□□□□□ -0.38
SEMA3B-203ENST00000419007 A0A1W2PNU3 283 aaPredicted RBP12.64□□□□□ -0.39
SEMA3B-203ENST00000419007 ARL14EPLP0DKL9 152 aa12.64□□□□□ -0.39
SEMA3B-203ENST00000419007 GPR12P47775 334 aa12.64□□□□□ -0.39
SEMA3B-203ENST00000419007 THBS3P49746 956 aa12.64□□□□□ -0.39
SEMA3B-203ENST00000419007 ZNF766Q5HY98 468 aa12.64□□□□□ -0.39
SEMA3B-203ENST00000419007 LRP11Q86VZ4 500 aa12.64□□□□□ -0.39
SEMA3B-203ENST00000419007 OR4A16Q8NH70 328 aa12.64□□□□□ -0.39
SEMA3B-203ENST00000419007 SSMEM1Q8WWF3 244 aa12.64□□□□□ -0.39
SEMA3B-203ENST00000419007 MKRN2OSH3BPM6 223 aa12.64□□□□□ -0.39
SEMA3B-203ENST00000419007 NOL4LQ96MY1 436 aaPredicted RBP12.64□□□□□ -0.39
SEMA3B-203ENST00000419007 NDUFAF3Q9BU61 184 aa12.64□□□□□ -0.39
SEMA3B-203ENST00000419007 MRPL37Q9BZE1 423 aaKnown RBP12.64□□□□□ -0.39
SEMA3B-203ENST00000419007 RYDENQ9NUL5 291 aaKnown RBP12.64□□□□□ -0.39
SEMA3B-203ENST00000419007 MDFIC2A0A1B0GVS7 189 aa12.64□□□□□ -0.39
SEMA3B-203ENST00000419007 IQCF6A8MYZ5 107 aa12.64□□□□□ -0.39
SEMA3B-203ENST00000419007 F6UZH7 168 aa12.64□□□□□ -0.39
SEMA3B-203ENST00000419007 PDE6DO43924 150 aa12.64□□□□□ -0.39
SEMA3B-203ENST00000419007 COL8A2P25067 703 aa12.64□□□□□ -0.39
SEMA3B-203ENST00000419007 FOXF2Q12947 444 aa12.64□□□□□ -0.39
SEMA3B-203ENST00000419007 MIC13Q5XKP0 118 aa12.64□□□□□ -0.39
SEMA3B-203ENST00000419007 ACP7Q6ZNF0 438 aa12.64□□□□□ -0.39
SEMA3B-203ENST00000419007 KMT2EQ8IZD2 1858 aa12.64□□□□□ -0.39
SEMA3B-203ENST00000419007 GRIFINA4D1Z8 144 aa12.63□□□□□ -0.39
SEMA3B-203ENST00000419007 SPINT2O43291 252 aa12.63□□□□□ -0.39
SEMA3B-203ENST00000419007 CD33P20138 364 aa12.63□□□□□ -0.39
SEMA3B-203ENST00000419007 BTF3P20290 206 aaKnown RBP12.63□□□□□ -0.39
SEMA3B-203ENST00000419007 HOXC12P31275 282 aa12.63□□□□□ -0.39
SEMA3B-203ENST00000419007 GABRA6Q16445 453 aa12.63□□□□□ -0.39
SEMA3B-203ENST00000419007 IQCJQ1A5X6 159 aa12.63□□□□□ -0.39
SEMA3B-203ENST00000419007 ABHD12Q8N2K0 398 aa12.63□□□□□ -0.39
SEMA3B-203ENST00000419007 ATG101Q9BSB4 218 aa12.63□□□□□ -0.39
SEMA3B-203ENST00000419007 ZNF705FA8MVS1 300 aaPredicted RBP12.63□□□□□ -0.39
SEMA3B-203ENST00000419007 M0R1X1 148 aa12.63□□□□□ -0.39
SEMA3B-203ENST00000419007 RRHO14718 337 aa12.63□□□□□ -0.39
SEMA3B-203ENST00000419007 ZNF705DP0CH99 300 aaPredicted RBP12.63□□□□□ -0.39
SEMA3B-203ENST00000419007 ZNF705BP0CI00 300 aaPredicted RBP12.63□□□□□ -0.39
SEMA3B-203ENST00000419007 KITLGP21583 273 aa12.63□□□□□ -0.39
SEMA3B-203ENST00000419007 HSD17B10Q99714 261 aaKnown RBP12.63□□□□□ -0.39
SEMA3B-203ENST00000419007 FKBP11Q9NYL4 201 aa12.63□□□□□ -0.39
SEMA3B-203ENST00000419007 WDR83OSQ9Y284 106 aa12.63□□□□□ -0.39
SEMA3B-203ENST00000419007 TMEM210A6NLX4 147 aa12.63□□□□□ -0.39
SEMA3B-203ENST00000419007 RBFOX2O43251 390 aaKnown RBP eCLIP12.63□□□□□ -0.397e-15■□□□□ 11.3
SEMA3B-203ENST00000419007 GCH1P30793 250 aa12.63□□□□□ -0.39
SEMA3B-203ENST00000419007 EIF4EBP1Q13541 118 aaPredicted RBP12.63□□□□□ -0.39
SEMA3B-203ENST00000419007 GVINP1Q7Z2Y8 2422 aa12.63□□□□□ -0.39
SEMA3B-203ENST00000419007 CEP250Q9BV73 2442 aa12.63□□□□□ -0.39
SEMA3B-203ENST00000419007 PEAR1Q5VY43 1037 aaPredicted RBP12.62□□□□□ -0.39
SEMA3B-203ENST00000419007 WDR82Q6UXN9 313 aa12.62□□□□□ -0.39
SEMA3B-203ENST00000419007 C11orf53Q8IXP5 236 aa12.62□□□□□ -0.39
SEMA3B-203ENST00000419007 GBGT1Q8N5D6 347 aa12.62□□□□□ -0.39
SEMA3B-203ENST00000419007 SFRP2Q96HF1 295 aa12.62□□□□□ -0.39
SEMA3B-203ENST00000419007 TRIB1Q96RU8 372 aa12.62□□□□□ -0.39
SEMA3B-203ENST00000419007 CBLN4Q9NTU7 201 aa12.62□□□□□ -0.39
SEMA3B-203ENST00000419007 SCO2A0A1W2PP80 73 aa12.62□□□□□ -0.39
SEMA3B-203ENST00000419007 AQP7O14520 342 aa12.62□□□□□ -0.39
SEMA3B-203ENST00000419007 EREGO14944 169 aa12.62□□□□□ -0.39
SEMA3B-203ENST00000419007 PDLIM4P50479 330 aa12.62□□□□□ -0.39
SEMA3B-203ENST00000419007 SPRY4Q9C004 299 aa12.62□□□□□ -0.39
SEMA3B-203ENST00000419007 LNP1A1A4G5 178 aa12.61□□□□□ -0.39
SEMA3B-203ENST00000419007 NUPR1O60356 82 aa12.61□□□□□ -0.39
SEMA3B-203ENST00000419007 TYMSP04818 313 aa12.61□□□□□ -0.39
SEMA3B-203ENST00000419007 LCN2P80188 198 aa12.61□□□□□ -0.39
SEMA3B-203ENST00000419007 RPL39P5Q59GN2 51 aa12.61□□□□□ -0.39
SEMA3B-203ENST00000419007 MS4A10Q96PG2 267 aa12.61□□□□□ -0.39
SEMA3B-203ENST00000419007 HINT2Q9BX68 163 aa12.61□□□□□ -0.39
SEMA3B-203ENST00000419007 MS4A5Q9H3V2 200 aa12.61□□□□□ -0.39
SEMA3B-203ENST00000419007 PXMP4Q9Y6I8 212 aa12.61□□□□□ -0.39
SEMA3B-203ENST00000419007 TRBV20OR9-2A0A075B6H5 130 aa12.61□□□□□ -0.39
SEMA3B-203ENST00000419007 SELLP14151 372 aa12.61□□□□□ -0.39
SEMA3B-203ENST00000419007 CCKARP32238 428 aa12.61□□□□□ -0.39
SEMA3B-203ENST00000419007 BPIFB3P59826 476 aa12.61□□□□□ -0.39
SEMA3B-203ENST00000419007 VWC2Q2TAL6 325 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms