RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 SAMD12Q8N8I0 201 aa12.71□□□□□ -0.37
LINC00404-201ENST00000418660 TCTEX1D2Q8WW35 142 aa12.71□□□□□ -0.37
LINC00404-201ENST00000418660 SNAPC3Q92966 411 aa12.71□□□□□ -0.37
LINC00404-201ENST00000418660 SLC25A46Q96AG3 418 aa12.71□□□□□ -0.37
LINC00404-201ENST00000418660 KCTD12Q96CX2 325 aaKnown RBP12.71□□□□□ -0.37
LINC00404-201ENST00000418660 PHB2Q99623 299 aa12.71□□□□□ -0.37
LINC00404-201ENST00000418660 FUNDC2Q9BWH2 189 aa12.71□□□□□ -0.37
LINC00404-201ENST00000418660 A0A0G2JLM5 398 aa12.7□□□□□ -0.38
LINC00404-201ENST00000418660 C13orf42A0A1B0GVH6 325 aa12.7□□□□□ -0.38
LINC00404-201ENST00000418660 PPYP01298 95 aa12.7□□□□□ -0.38
LINC00404-201ENST00000418660 FCER2P06734 321 aa12.7□□□□□ -0.38
LINC00404-201ENST00000418660 ZNF429Q86V71 674 aa12.7□□□□□ -0.38
LINC00404-201ENST00000418660 MMD2Q8IY49 270 aa12.7□□□□□ -0.38
LINC00404-201ENST00000418660 ZBTB34Q8NCN2 500 aa12.7□□□□□ -0.38
LINC00404-201ENST00000418660 OR5AP2Q8NGF4 316 aa12.7□□□□□ -0.38
LINC00404-201ENST00000418660 OR13F1Q8NGS4 319 aa12.7□□□□□ -0.38
LINC00404-201ENST00000418660 OR4S2Q8NH73 311 aa12.7□□□□□ -0.38
LINC00404-201ENST00000418660 SRSF12Q8WXF0 261 aaKnown RBP12.7□□□□□ -0.38
LINC00404-201ENST00000418660 ACOT12Q8WYK0 555 aa12.7□□□□□ -0.38
LINC00404-201ENST00000418660 TINAGL1Q9GZM7 467 aaPredicted RBP12.7□□□□□ -0.38
LINC00404-201ENST00000418660 ZNF430Q9H8G1 570 aaPredicted RBP12.7□□□□□ -0.38
LINC00404-201ENST00000418660 CCL28Q9NRJ3 127 aa12.7□□□□□ -0.38
LINC00404-201ENST00000418660 TAS2R8Q9NYW2 309 aa12.7□□□□□ -0.38
LINC00404-201ENST00000418660 MEIS3P1A6NDR6 274 aa12.69□□□□□ -0.38
LINC00404-201ENST00000418660 ACTL6BO94805 426 aa12.69□□□□□ -0.38
LINC00404-201ENST00000418660 BRWD1-AS2P59051 145 aa12.69□□□□□ -0.38
LINC00404-201ENST00000418660 TAS2R20P59543 309 aa12.69□□□□□ -0.38
LINC00404-201ENST00000418660 NCS1P62166 190 aa12.69□□□□□ -0.38
LINC00404-201ENST00000418660 TMEM69Q5SWH9 247 aa12.69□□□□□ -0.38
LINC00404-201ENST00000418660 SECTM1Q8WVN6 248 aa12.69□□□□□ -0.38
LINC00404-201ENST00000418660 GIMAP1Q8WWP7 306 aa12.69□□□□□ -0.38
LINC00404-201ENST00000418660 PRR25Q96S07 402 aa12.69□□□□□ -0.38
LINC00404-201ENST00000418660 RANGRFQ9HD47 186 aaPredicted RBP12.69□□□□□ -0.38
LINC00404-201ENST00000418660 IFT46Q9NQC8 304 aa12.69□□□□□ -0.38
LINC00404-201ENST00000418660 COA4Q9NYJ1 87 aa12.69□□□□□ -0.38
LINC00404-201ENST00000418660 OR9G9P0C7N8 305 aa12.68□□□□□ -0.38
LINC00404-201ENST00000418660 APELAP0DMC3 54 aa12.68□□□□□ -0.38
LINC00404-201ENST00000418660 KIR2DS2P43631 304 aa12.68□□□□□ -0.38
LINC00404-201ENST00000418660 VBP1P61758 197 aa12.68□□□□□ -0.38
LINC00404-201ENST00000418660 ACSM6Q6P461 480 aa12.68□□□□□ -0.38
LINC00404-201ENST00000418660 ADAD2Q8NCV1 583 aaKnown RBP12.68□□□□□ -0.38
LINC00404-201ENST00000418660 VSTM2AQ8TAG5 236 aa12.68□□□□□ -0.38
LINC00404-201ENST00000418660 GPHA2Q96T91 129 aa12.68□□□□□ -0.38
LINC00404-201ENST00000418660 SPIN2AQ99865 258 aa12.68□□□□□ -0.38
LINC00404-201ENST00000418660 B9D2Q9BPU9 175 aa12.68□□□□□ -0.38
LINC00404-201ENST00000418660 SPIN2BQ9BPZ2 258 aa12.68□□□□□ -0.38
LINC00404-201ENST00000418660 SLC5A7Q9GZV3 580 aa12.68□□□□□ -0.38
LINC00404-201ENST00000418660 ANAPC10Q9UM13 185 aa12.68□□□□□ -0.38
LINC00404-201ENST00000418660 ZNF256Q9Y2P7 627 aaPredicted RBP12.68□□□□□ -0.38
LINC00404-201ENST00000418660 MPPED1O15442 326 aa12.67□□□□□ -0.38
LINC00404-201ENST00000418660 SAP30O75446 220 aa12.67□□□□□ -0.38
LINC00404-201ENST00000418660 OR2A4O95047 310 aa12.67□□□□□ -0.38
LINC00404-201ENST00000418660 PRSS3P35030 304 aa12.67□□□□□ -0.38
LINC00404-201ENST00000418660 FXYD4P59646 89 aa12.67□□□□□ -0.38
LINC00404-201ENST00000418660 CD69Q07108 199 aa12.67□□□□□ -0.38
LINC00404-201ENST00000418660 VKORC1L1Q8N0U8 176 aa12.67□□□□□ -0.38
LINC00404-201ENST00000418660 PUSL1Q8N0Z8 303 aaKnown RBP12.67□□□□□ -0.38
LINC00404-201ENST00000418660 TMEM167AQ8TBQ9 72 aa12.67□□□□□ -0.38
LINC00404-201ENST00000418660 USMG5Q96IX5 58 aa12.67□□□□□ -0.38
LINC00404-201ENST00000418660 CMTM3Q96MX0 182 aa12.67□□□□□ -0.38
LINC00404-201ENST00000418660 OR2A7Q96R45 310 aa12.67□□□□□ -0.38
LINC00404-201ENST00000418660 COMMD3Q9UBI1 195 aa12.67□□□□□ -0.38
LINC00404-201ENST00000418660 LSM4Q9Y4Z0 139 aaKnown RBP12.67□□□□□ -0.38
LINC00404-201ENST00000418660 TNFSF12O43508 249 aa12.66□□□□□ -0.38
LINC00404-201ENST00000418660 KBTBD11O94819 623 aa12.66□□□□□ -0.38
LINC00404-201ENST00000418660 HRASP01112 189 aa12.66□□□□□ -0.38
LINC00404-201ENST00000418660 EIF4EP06730 217 aaKnown RBP12.66□□□□□ -0.38
LINC00404-201ENST00000418660 NAT1P18440 290 aa12.66□□□□□ -0.38
LINC00404-201ENST00000418660 ZP3P21754 424 aa12.66□□□□□ -0.38
LINC00404-201ENST00000418660 ZNF343Q6P1L6 599 aa12.66□□□□□ -0.38
LINC00404-201ENST00000418660 DHRS11Q6UWP2 260 aa12.66□□□□□ -0.38
LINC00404-201ENST00000418660 AIFM2Q9BRQ8 373 aa12.66□□□□□ -0.38
LINC00404-201ENST00000418660 EHFQ9NZC4 300 aa12.66□□□□□ -0.38
LINC00404-201ENST00000418660 ANKRD34BA5PLL1 514 aa12.65□□□□□ -0.38
LINC00404-201ENST00000418660 RBFOX2O43251 390 aaKnown RBP eCLIP12.65□□□□□ -0.38
LINC00404-201ENST00000418660 APOA1P02647 267 aa12.65□□□□□ -0.38
LINC00404-201ENST00000418660 SMIM18P0DKX4 95 aa12.65□□□□□ -0.38
LINC00404-201ENST00000418660 MAS1LP35410 378 aa12.65□□□□□ -0.38
LINC00404-201ENST00000418660 HERV-K104P61576 105 aa12.65□□□□□ -0.38
LINC00404-201ENST00000418660 CATR1Q13166 79 aa12.65□□□□□ -0.38
LINC00404-201ENST00000418660 DYRK1AQ13627 763 aa12.65□□□□□ -0.38
LINC00404-201ENST00000418660 C10orf55Q5SWW7 151 aa12.65□□□□□ -0.38
LINC00404-201ENST00000418660 ZNF818PQ6ZRF7 136 aa12.65□□□□□ -0.38
LINC00404-201ENST00000418660 SPAG16Q8N0X2 631 aa12.65□□□□□ -0.38
LINC00404-201ENST00000418660 TTC9CQ8N5M4 171 aa12.65□□□□□ -0.38
LINC00404-201ENST00000418660 BORCS5Q969J3 196 aa12.65□□□□□ -0.38
LINC00404-201ENST00000418660 OR4C12Q96R67 309 aa12.65□□□□□ -0.38
LINC00404-201ENST00000418660 ELOVL1Q9BW60 279 aa12.65□□□□□ -0.38
LINC00404-201ENST00000418660 PEF1Q9UBV8 284 aaKnown RBP12.65□□□□□ -0.38
LINC00404-201ENST00000418660 SMIM31A0A1B0GVY4 71 aa12.64□□□□□ -0.39
LINC00404-201ENST00000418660 SULT1C2O00338 296 aa12.64□□□□□ -0.39
LINC00404-201ENST00000418660 RBMXL2O75526 392 aaKnown RBP12.64□□□□□ -0.39
LINC00404-201ENST00000418660 LY86O95711 162 aa12.64□□□□□ -0.39
LINC00404-201ENST00000418660 PMP2P02689 132 aa12.64□□□□□ -0.39
LINC00404-201ENST00000418660 RFX2P48378 723 aa12.64□□□□□ -0.39
LINC00404-201ENST00000418660 RORCP51449 518 aa12.64□□□□□ -0.39
LINC00404-201ENST00000418660 TAS2R46P59540 309 aa12.64□□□□□ -0.39
LINC00404-201ENST00000418660 DEFA5Q01523 94 aa12.64□□□□□ -0.39
LINC00404-201ENST00000418660 SLC25A42Q86VD7 318 aa12.64□□□□□ -0.39
LINC00404-201ENST00000418660 TMEM17Q86X19 198 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms