RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 ARPC1BO15143 372 aaKnown RBP14.62□□□□□ -0.07
PTCD3-204ENST00000418628 PGLYRP1O75594 196 aaPredicted RBP14.62□□□□□ -0.07
PTCD3-204ENST00000418628 RAB3DO95716 219 aa14.62□□□□□ -0.07
PTCD3-204ENST00000418628 TSPAN15O95858 294 aa14.62□□□□□ -0.07
PTCD3-204ENST00000418628 IGHG4P01861 327 aa14.62□□□□□ -0.07
PTCD3-204ENST00000418628 PJVKQ0ZLH3 352 aa14.62□□□□□ -0.07
PTCD3-204ENST00000418628 MEF2DQ14814 521 aa14.62□□□□□ -0.07
PTCD3-204ENST00000418628 PLGLAQ15195 96 aa14.62□□□□□ -0.07
PTCD3-204ENST00000418628 POU2AF1Q16633 256 aa14.62□□□□□ -0.07
PTCD3-204ENST00000418628 SLC38A6Q8IZM9 456 aa14.62□□□□□ -0.07
PTCD3-204ENST00000418628 PUSL1Q8N0Z8 303 aaKnown RBP14.62□□□□□ -0.07
PTCD3-204ENST00000418628 MINDY2Q8NBR6 621 aa14.62□□□□□ -0.07
PTCD3-204ENST00000418628 OR4C16Q8NGL9 310 aa14.62□□□□□ -0.07
PTCD3-204ENST00000418628 MYOZ3Q8TDC0 251 aa14.62□□□□□ -0.07
PTCD3-204ENST00000418628 GON7Q9BXV9 100 aa14.62□□□□□ -0.07
PTCD3-204ENST00000418628 IGLV1-40P01703 118 aa14.61□□□□□ -0.07
PTCD3-204ENST00000418628 RLN1P04808 185 aa14.61□□□□□ -0.07
PTCD3-204ENST00000418628 AKAIN1P0CW23 69 aa14.61□□□□□ -0.07
PTCD3-204ENST00000418628 PSMB8P28062 276 aa14.61□□□□□ -0.07
PTCD3-204ENST00000418628 SLC35B1P78383 322 aa14.61□□□□□ -0.07
PTCD3-204ENST00000418628 VMA21Q3ZAQ7 101 aa14.61□□□□□ -0.07
PTCD3-204ENST00000418628 FAAP20Q6NZ36 180 aa14.61□□□□□ -0.07
PTCD3-204ENST00000418628 LPCAT3Q6P1A2 487 aa14.61□□□□□ -0.07
PTCD3-204ENST00000418628 SPAG16Q8N0X2 631 aa14.61□□□□□ -0.07
PTCD3-204ENST00000418628 SRRQ9GZT4 340 aa14.61□□□□□ -0.07
PTCD3-204ENST00000418628 PARP11Q9NR21 331 aa14.61□□□□□ -0.07
PTCD3-204ENST00000418628 NUBP2Q9Y5Y2 271 aa14.61□□□□□ -0.07
PTCD3-204ENST00000418628 NOTCH3Q9UM47 2321 aa14.61□□□□□ -0.07
PTCD3-204ENST00000418628 G3V318 75 aa14.6□□□□□ -0.07
PTCD3-204ENST00000418628 IFNA6P05013 189 aa14.6□□□□□ -0.07
PTCD3-204ENST00000418628 VDAC1P21796 283 aa14.6□□□□□ -0.07
PTCD3-204ENST00000418628 RND3P61587 244 aa14.6□□□□□ -0.07
PTCD3-204ENST00000418628 FOXE3Q13461 319 aa14.6□□□□□ -0.07
PTCD3-204ENST00000418628 KLF9Q13886 244 aaPredicted RBP14.6□□□□□ -0.07
PTCD3-204ENST00000418628 PRSS8Q16651 343 aa14.6□□□□□ -0.07
PTCD3-204ENST00000418628 CMTM1Q8IZ96 169 aa14.6□□□□□ -0.07
PTCD3-204ENST00000418628 TCTEX1D1Q8N7M0 179 aa14.6□□□□□ -0.07
PTCD3-204ENST00000418628 OR51H1Q8NH63 302 aa14.6□□□□□ -0.07
PTCD3-204ENST00000418628 TERB2Q8NHR7 220 aa14.6□□□□□ -0.07
PTCD3-204ENST00000418628 ARPC1AQ92747 370 aa14.6□□□□□ -0.07
PTCD3-204ENST00000418628 ZNF486Q96H40 463 aaPredicted RBP14.6□□□□□ -0.07
PTCD3-204ENST00000418628 SLC2A9Q9NRM0 540 aa14.6□□□□□ -0.07
PTCD3-204ENST00000418628 FAM212BQ9NTI7 297 aaPredicted RBP14.6□□□□□ -0.07
PTCD3-204ENST00000418628 SLC2A8Q9NY64 477 aa14.6□□□□□ -0.07
PTCD3-204ENST00000418628 TSSC4Q9Y5U2 329 aaPredicted RBP14.6□□□□□ -0.07
PTCD3-204ENST00000418628 NOTCH1P46531 2555 aa14.59□□□□□ -0.07
PTCD3-204ENST00000418628 TRAV41A0A0B4J266 112 aa14.59□□□□□ -0.07
PTCD3-204ENST00000418628 KBTBD11O94819 623 aa14.59□□□□□ -0.07
PTCD3-204ENST00000418628 HPRT1P00492 218 aa14.59□□□□□ -0.07
PTCD3-204ENST00000418628 OPN1MWP04001 364 aa14.59□□□□□ -0.07
PTCD3-204ENST00000418628 ELANEP08246 267 aa14.59□□□□□ -0.07
PTCD3-204ENST00000418628 IL6RP08887 468 aaPredicted RBP14.59□□□□□ -0.07
PTCD3-204ENST00000418628 OPN1MW2P0DN77 364 aa14.59□□□□□ -0.07
PTCD3-204ENST00000418628 OPN1MW3P0DN78 364 aa14.59□□□□□ -0.07
PTCD3-204ENST00000418628 F2RP25116 425 aa14.59□□□□□ -0.07
PTCD3-204ENST00000418628 TAS2R31P59538 309 aa14.59□□□□□ -0.07
PTCD3-204ENST00000418628 SPANXN2Q5MJ10 180 aa14.59□□□□□ -0.07
PTCD3-204ENST00000418628 TEX38Q6PEX7 206 aa14.59□□□□□ -0.07
PTCD3-204ENST00000418628 IDO2Q6ZQW0 420 aa14.59□□□□□ -0.07
PTCD3-204ENST00000418628 TMEM167AQ8TBQ9 72 aa14.59□□□□□ -0.07
PTCD3-204ENST00000418628 CD300LFQ8TDQ1 290 aa14.59□□□□□ -0.07
PTCD3-204ENST00000418628 RHOVQ96L33 236 aa14.59□□□□□ -0.07
PTCD3-204ENST00000418628 CLCC1Q96S66 551 aa14.59□□□□□ -0.07
PTCD3-204ENST00000418628 THAP7Q9BT49 309 aaPredicted RBP14.59□□□□□ -0.07
PTCD3-204ENST00000418628 PLEKHA2Q9HB19 425 aa14.59□□□□□ -0.07
PTCD3-204ENST00000418628 COMMD9Q9P000 198 aa14.59□□□□□ -0.07
PTCD3-204ENST00000418628 SOX15O60248 233 aa14.58□□□□□ -0.08
PTCD3-204ENST00000418628 RPL23AP62750 156 aaKnown RBP14.58□□□□□ -0.08
PTCD3-204ENST00000418628 FXYD3Q14802 87 aa14.58□□□□□ -0.08
PTCD3-204ENST00000418628 ZNF585BQ52M93 769 aa14.58□□□□□ -0.08
PTCD3-204ENST00000418628 PHLDA2Q53GA4 152 aa14.58□□□□□ -0.08
PTCD3-204ENST00000418628 AKIRIN2Q53H80 203 aa14.58□□□□□ -0.08
PTCD3-204ENST00000418628 VKORC1L1Q8N0U8 176 aa14.58□□□□□ -0.08
PTCD3-204ENST00000418628 Q8N402 240 aa14.58□□□□□ -0.08
PTCD3-204ENST00000418628 OR13C8Q8NGS7 320 aa14.58□□□□□ -0.08
PTCD3-204ENST00000418628 SDHCQ99643 169 aaPredicted RBP14.58□□□□□ -0.08
PTCD3-204ENST00000418628 ZNF430Q9H8G1 570 aaPredicted RBP14.58□□□□□ -0.08
PTCD3-204ENST00000418628 BET1LQ9NYM9 111 aa14.58□□□□□ -0.08
PTCD3-204ENST00000418628 WSB1Q9Y6I7 421 aa14.58□□□□□ -0.08
PTCD3-204ENST00000418628 TCRBV4S1A1TA0A5B7 111 aa14.57□□□□□ -0.08
PTCD3-204ENST00000418628 S1PR2O95136 353 aa14.57□□□□□ -0.08
PTCD3-204ENST00000418628 HRASP01112 189 aa14.57□□□□□ -0.08
PTCD3-204ENST00000418628 FGF2P09038 288 aa14.57□□□□□ -0.08
PTCD3-204ENST00000418628 PPP5CP53041 499 aa14.57□□□□□ -0.08
PTCD3-204ENST00000418628 SURF2Q15527 256 aaPredicted RBP14.57□□□□□ -0.08
PTCD3-204ENST00000418628 PYDC2Q56P42 97 aa14.57□□□□□ -0.08
PTCD3-204ENST00000418628 ASPHD1Q5U4P2 390 aa14.57□□□□□ -0.08
PTCD3-204ENST00000418628 CADM3Q8N126 398 aa14.57□□□□□ -0.08
PTCD3-204ENST00000418628 VSTM2AQ8TAG5 236 aa14.57□□□□□ -0.08
PTCD3-204ENST00000418628 DEDD2Q8WXF8 326 aa14.57□□□□□ -0.08
PTCD3-204ENST00000418628 FAM103A1Q9BTL3 118 aaKnown RBP14.57□□□□□ -0.08
PTCD3-204ENST00000418628 DISC1C4P0D8 188 aa14.56□□□□□ -0.08
PTCD3-204ENST00000418628 CREBL2O60519 120 aaPredicted RBP14.56□□□□□ -0.08
PTCD3-204ENST00000418628 OR2A4O95047 310 aa14.56□□□□□ -0.08
PTCD3-204ENST00000418628 RPLP1P05386 114 aaKnown RBP14.56□□□□□ -0.08
PTCD3-204ENST00000418628 NQO2P16083 231 aa14.56□□□□□ -0.08
PTCD3-204ENST00000418628 ECI1P42126 302 aa14.56□□□□□ -0.08
PTCD3-204ENST00000418628 KIAA0141Q14154 515 aaPredicted RBP14.56□□□□□ -0.08
PTCD3-204ENST00000418628 ECSCRQ19T08 205 aa14.56□□□□□ -0.08
PTCD3-204ENST00000418628 NSUN5P1Q3KNT7 163 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms