RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 KRBOX1C9JBD0 128 aa13.71□□□□□ -0.21
SSBP3-205ENST00000417664 PPIAL4GP0DN37 164 aa13.71□□□□□ -0.21
SSBP3-205ENST00000417664 EFNA4P52798 201 aa13.71□□□□□ -0.21
SSBP3-205ENST00000417664 ERVFRD-1P60508 538 aa13.71□□□□□ -0.21
SSBP3-205ENST00000417664 RPP30P78346 268 aaKnown RBP13.71□□□□□ -0.21
SSBP3-205ENST00000417664 RELBQ01201 579 aa13.71□□□□□ -0.21
SSBP3-205ENST00000417664 ATP6V1FQ16864 119 aa13.71□□□□□ -0.21
SSBP3-205ENST00000417664 IL34Q6ZMJ4 242 aa13.71□□□□□ -0.21
SSBP3-205ENST00000417664 HSD17B11Q8NBQ5 300 aa13.71□□□□□ -0.21
SSBP3-205ENST00000417664 LY6G5BQ8NDX9 201 aa13.71□□□□□ -0.21
SSBP3-205ENST00000417664 ST6GALNAC6Q969X2 333 aa13.71□□□□□ -0.21
SSBP3-205ENST00000417664 CLCC1Q96S66 551 aa13.71□□□□□ -0.21
SSBP3-205ENST00000417664 MMP26Q9NRE1 261 aa13.71□□□□□ -0.21
SSBP3-205ENST00000417664 DOCK11Q5JSL3 2073 aa13.71□□□□□ -0.21
SSBP3-205ENST00000417664 IFNA17P01571 189 aa13.7□□□□□ -0.22
SSBP3-205ENST00000417664 LIPFP07098 398 aa13.7□□□□□ -0.22
SSBP3-205ENST00000417664 METTL15P1P0C7V9 234 aa13.7□□□□□ -0.22
SSBP3-205ENST00000417664 PRRX1P54821 245 aa13.7□□□□□ -0.22
SSBP3-205ENST00000417664 TMEM267Q0VDI3 215 aaPredicted RBP13.7□□□□□ -0.22
SSBP3-205ENST00000417664 SSX9Q7RTT3 188 aa13.7□□□□□ -0.22
SSBP3-205ENST00000417664 OR13D1Q8NGV5 346 aa13.7□□□□□ -0.22
SSBP3-205ENST00000417664 QTRT1Q9BXR0 403 aaKnown RBP13.7□□□□□ -0.22
SSBP3-205ENST00000417664 FOXA2Q9Y261 457 aaPredicted RBP13.7□□□□□ -0.22
SSBP3-205ENST00000417664 CACNA1BQ00975 2339 aa13.7□□□□□ -0.22
SSBP3-205ENST00000417664 C15orf61A6NNL5 157 aa13.69□□□□□ -0.22
SSBP3-205ENST00000417664 TEX46H3BTG2 121 aa13.69□□□□□ -0.22
SSBP3-205ENST00000417664 OR8U8P0C7N1 319 aa13.69□□□□□ -0.22
SSBP3-205ENST00000417664 ATP6V0CP27449 155 aa13.69□□□□□ -0.22
SSBP3-205ENST00000417664 F2RL1P55085 397 aa13.69□□□□□ -0.22
SSBP3-205ENST00000417664 GNB2P62879 340 aa13.69□□□□□ -0.22
SSBP3-205ENST00000417664 PXDC1Q5TGL8 231 aa13.69□□□□□ -0.22
SSBP3-205ENST00000417664 PUSL1Q8N0Z8 303 aaKnown RBP13.69□□□□□ -0.22
SSBP3-205ENST00000417664 PINX1Q96BK5 328 aaKnown RBP13.69□□□□□ -0.22
SSBP3-205ENST00000417664 PRNDQ9UKY0 176 aa13.69□□□□□ -0.22
SSBP3-205ENST00000417664 KLF2Q9Y5W3 355 aaPredicted RBP13.69□□□□□ -0.22
SSBP3-205ENST00000417664 SMG1Q96Q15 3661 aaKnown RBP13.69□□□□□ -0.22
SSBP3-205ENST00000417664 H0YJW9 148 aa13.69□□□□□ -0.22
SSBP3-205ENST00000417664 LY6HO94772 140 aa13.69□□□□□ -0.22
SSBP3-205ENST00000417664 IL6RP08887 468 aaPredicted RBP13.69□□□□□ -0.22
SSBP3-205ENST00000417664 ZP3P21754 424 aa13.69□□□□□ -0.22
SSBP3-205ENST00000417664 MC5RP33032 325 aa13.69□□□□□ -0.22
SSBP3-205ENST00000417664 GPR6P46095 362 aaPredicted RBP13.69□□□□□ -0.22
SSBP3-205ENST00000417664 RAB13P51153 203 aa13.69□□□□□ -0.22
SSBP3-205ENST00000417664 OR4A47Q6IF82 309 aa13.69□□□□□ -0.22
SSBP3-205ENST00000417664 PDPNQ86YL7 162 aa13.69□□□□□ -0.22
SSBP3-205ENST00000417664 LILRB2Q8N423 598 aa13.69□□□□□ -0.22
SSBP3-205ENST00000417664 ZNF525Q8N782 197 aa13.69□□□□□ -0.22
SSBP3-205ENST00000417664 BEND2Q8NDZ0 799 aa13.69□□□□□ -0.22
SSBP3-205ENST00000417664 LYPD6BQ8NI32 183 aa13.69□□□□□ -0.22
SSBP3-205ENST00000417664 MRPL20Q9BYC9 149 aaKnown RBP13.69□□□□□ -0.22
SSBP3-205ENST00000417664 HIPK2Q9H2X6 1198 aa13.69□□□□□ -0.22
SSBP3-205ENST00000417664 TMEM14BQ9NUH8 114 aa13.69□□□□□ -0.22
SSBP3-205ENST00000417664 FKBP11Q9NYL4 201 aa13.69□□□□□ -0.22
SSBP3-205ENST00000417664 NUP50Q9UKX7 468 aa13.69□□□□□ -0.22
SSBP3-205ENST00000417664 MALRD1Q5VYJ5 2156 aa13.69□□□□□ -0.22
SSBP3-205ENST00000417664 TMEM177Q53S58 311 aa13.68□□□□□ -0.22
SSBP3-205ENST00000417664 SLC25A24Q6NUK1 477 aa13.68□□□□□ -0.22
SSBP3-205ENST00000417664 VKORC1L1Q8N0U8 176 aa13.68□□□□□ -0.22
SSBP3-205ENST00000417664 OR10P1Q8NGE3 313 aa13.68□□□□□ -0.22
SSBP3-205ENST00000417664 OR4C13Q8NGP0 309 aa13.68□□□□□ -0.22
SSBP3-205ENST00000417664 OR2G3Q8NGZ4 309 aa13.68□□□□□ -0.22
SSBP3-205ENST00000417664 SCGB1C1Q8TD33 95 aa13.68□□□□□ -0.22
SSBP3-205ENST00000417664 NABP2Q9BQ15 211 aa13.68□□□□□ -0.22
SSBP3-205ENST00000417664 SSBP3Q9BWW4 388 aaPredicted RBP13.68□□□□□ -0.22
SSBP3-205ENST00000417664 CLEC7AQ9BXN2 247 aa13.68□□□□□ -0.22
SSBP3-205ENST00000417664 BET1LQ9NYM9 111 aa13.68□□□□□ -0.22
SSBP3-205ENST00000417664 PLA2G2EQ9NZK7 142 aa13.68□□□□□ -0.22
SSBP3-205ENST00000417664 ZNF257Q9Y2Q1 563 aa13.68□□□□□ -0.22
SSBP3-205ENST00000417664 IGSF10Q6WRI0 2623 aa13.68□□□□□ -0.22
SSBP3-205ENST00000417664 IGHV2-26A0A0B4J1V2 119 aa13.67□□□□□ -0.22
SSBP3-205ENST00000417664 M0R1W7 72 aa13.67□□□□□ -0.22
SSBP3-205ENST00000417664 OVOL3O00110 214 aa13.67□□□□□ -0.22
SSBP3-205ENST00000417664 IGLV1-47P01700 117 aa13.67□□□□□ -0.22
SSBP3-205ENST00000417664 ARG1P05089 322 aa13.67□□□□□ -0.22
SSBP3-205ENST00000417664 OR2B8PP59922 312 aa13.67□□□□□ -0.22
SSBP3-205ENST00000417664 HSPE1P61604 102 aaKnown RBP13.67□□□□□ -0.22
SSBP3-205ENST00000417664 TLE4Q04727 773 aa13.67□□□□□ -0.22
SSBP3-205ENST00000417664 SLC38A11Q08AI6 406 aa13.67□□□□□ -0.22
SSBP3-205ENST00000417664 PJVKQ0ZLH3 352 aa13.67□□□□□ -0.22
SSBP3-205ENST00000417664 BTNL8Q6UX41 500 aa13.67□□□□□ -0.22
SSBP3-205ENST00000417664 Q6ZRG5 221 aa13.67□□□□□ -0.22
SSBP3-205ENST00000417664 TGIF2LXQ8IUE1 241 aa13.67□□□□□ -0.22
SSBP3-205ENST00000417664 COMMD1Q8N668 190 aa13.67□□□□□ -0.22
SSBP3-205ENST00000417664 LHX4Q969G2 390 aa13.67□□□□□ -0.22
SSBP3-205ENST00000417664 ZDHHC16Q969W1 377 aa13.67□□□□□ -0.22
SSBP3-205ENST00000417664 SPOCK3Q9BQ16 436 aa13.67□□□□□ -0.22
SSBP3-205ENST00000417664 SH3BGRL3Q9H299 93 aa13.67□□□□□ -0.22
SSBP3-205ENST00000417664 ZNRD1Q9P1U0 126 aa13.67□□□□□ -0.22
SSBP3-205ENST00000417664 AMMECR1Q9Y4X0 333 aaPredicted RBP13.67□□□□□ -0.22
SSBP3-205ENST00000417664 SHOXO15266 292 aa13.66□□□□□ -0.22
SSBP3-205ENST00000417664 IGKV1-16P04430 117 aa13.66□□□□□ -0.22
SSBP3-205ENST00000417664 CDKN1AP38936 164 aa13.66□□□□□ -0.22
SSBP3-205ENST00000417664 ARL16Q0P5N6 197 aa13.66□□□□□ -0.22
SSBP3-205ENST00000417664 LRRC75BQ2VPJ9 315 aa13.66□□□□□ -0.22
SSBP3-205ENST00000417664 HLA-DRB5Q30154 266 aa13.66□□□□□ -0.22
SSBP3-205ENST00000417664 DPPA3Q6W0C5 159 aa13.66□□□□□ -0.22
SSBP3-205ENST00000417664 HAPLN4Q86UW8 402 aa13.66□□□□□ -0.22
SSBP3-205ENST00000417664 VSTM2AQ8TAG5 236 aa13.66□□□□□ -0.22
SSBP3-205ENST00000417664 FLYWCH2Q96CP2 140 aaKnown RBP13.66□□□□□ -0.22
SSBP3-205ENST00000417664 OR4C12Q96R67 309 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms