RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 SVILO95425 2214 aa10.71□□□□□ -0.7
LRRTM1-205ENST00000417012 MDFIC2A0A1B0GVS7 189 aa10.71□□□□□ -0.7
LRRTM1-205ENST00000417012 OOEPA6NGQ2 149 aa10.71□□□□□ -0.7
LRRTM1-205ENST00000417012 WISP2O76076 250 aa10.71□□□□□ -0.7
LRRTM1-205ENST00000417012 GRPP07492 148 aa10.71□□□□□ -0.7
LRRTM1-205ENST00000417012 EIF4EBP1Q13541 118 aaPredicted RBP10.71□□□□□ -0.7
LRRTM1-205ENST00000417012 TRIP6Q15654 476 aaKnown RBP10.71□□□□□ -0.7
LRRTM1-205ENST00000417012 TCTEX1D1Q8N7M0 179 aa10.71□□□□□ -0.7
LRRTM1-205ENST00000417012 GP6Q9HCN6 339 aa10.71□□□□□ -0.7
LRRTM1-205ENST00000417012 KLF13Q9Y2Y9 288 aaPredicted RBP10.71□□□□□ -0.7
LRRTM1-205ENST00000417012 PXMP4Q9Y6I8 212 aa10.71□□□□□ -0.7
LRRTM1-205ENST00000417012 TRAV38-1A0A0B4J264 116 aa10.7□□□□□ -0.7
LRRTM1-205ENST00000417012 GALR2O43603 387 aaPredicted RBP10.7□□□□□ -0.7
LRRTM1-205ENST00000417012 PSPNO60542 156 aa10.7□□□□□ -0.7
LRRTM1-205ENST00000417012 HBZP02008 142 aa10.7□□□□□ -0.7
LRRTM1-205ENST00000417012 C1QTNF9P0C862 333 aa10.7□□□□□ -0.7
LRRTM1-205ENST00000417012 ERVFC1-1P60608 527 aa10.7□□□□□ -0.7
LRRTM1-205ENST00000417012 MRPL49Q13405 166 aaKnown RBP10.7□□□□□ -0.7
LRRTM1-205ENST00000417012 OR2J1Q9GZK6 312 aa10.7□□□□□ -0.7
LRRTM1-205ENST00000417012 CBLN4Q9NTU7 201 aa10.7□□□□□ -0.7
LRRTM1-205ENST00000417012 NAGKQ9UJ70 344 aa10.7□□□□□ -0.7
LRRTM1-205ENST00000417012 USF3Q68DE3 2245 aa10.7□□□□□ -0.7
LRRTM1-205ENST00000417012 FOXL1Q12952 345 aa10.7□□□□□ -0.7
LRRTM1-205ENST00000417012 C1orf194Q5T5A4 169 aa10.7□□□□□ -0.7
LRRTM1-205ENST00000417012 SGMS2Q8NHU3 365 aa10.7□□□□□ -0.7
LRRTM1-205ENST00000417012 RAB1CQ92928 201 aa10.7□□□□□ -0.7
LRRTM1-205ENST00000417012 SFRP2Q96HF1 295 aa10.7□□□□□ -0.7
LRRTM1-205ENST00000417012 MS4A10Q96PG2 267 aa10.7□□□□□ -0.7
LRRTM1-205ENST00000417012 DERL1Q9BUN8 251 aa10.7□□□□□ -0.7
LRRTM1-205ENST00000417012 SNHG12Q9BXW3 62 aa10.7□□□□□ -0.7
LRRTM1-205ENST00000417012 WDR83OSQ9Y284 106 aa10.7□□□□□ -0.7
LRRTM1-205ENST00000417012 OTOGLQ3ZCN5 2332 aa10.69□□□□□ -0.7
LRRTM1-205ENST00000417012 J3QW42 95 aa10.69□□□□□ -0.7
LRRTM1-205ENST00000417012 M0R143 59 aa10.69□□□□□ -0.7
LRRTM1-205ENST00000417012 CD46P15529 392 aa10.69□□□□□ -0.7
LRRTM1-205ENST00000417012 TMEM11P17152 192 aa10.69□□□□□ -0.7
LRRTM1-205ENST00000417012 CD1BP29016 333 aa10.69□□□□□ -0.7
LRRTM1-205ENST00000417012 EDDM3BP56851 147 aa10.69□□□□□ -0.7
LRRTM1-205ENST00000417012 TMEM249Q2WGJ8 235 aa10.69□□□□□ -0.7
LRRTM1-205ENST00000417012 ZNF766Q5HY98 468 aa10.69□□□□□ -0.7
LRRTM1-205ENST00000417012 GCSAMLQ5JQS6 135 aa10.69□□□□□ -0.7
LRRTM1-205ENST00000417012 FAM53AQ6NSI3 398 aaPredicted RBP10.69□□□□□ -0.7
LRRTM1-205ENST00000417012 BCL2L2Q92843 193 aaPredicted RBP10.69□□□□□ -0.7
LRRTM1-205ENST00000417012 C15orf62A8K5M9 175 aa10.69□□□□□ -0.7
LRRTM1-205ENST00000417012 IFNL4K9M1U5 179 aa10.69□□□□□ -0.7
LRRTM1-205ENST00000417012 SMPD2O60906 423 aa10.69□□□□□ -0.7
LRRTM1-205ENST00000417012 CD82P27701 267 aa10.69□□□□□ -0.7
LRRTM1-205ENST00000417012 OR10J1P30954 320 aa10.69□□□□□ -0.7
LRRTM1-205ENST00000417012 GABRA2P47869 451 aa10.69□□□□□ -0.7
LRRTM1-205ENST00000417012 BRWD1-AS2P59051 145 aa10.69□□□□□ -0.7
LRRTM1-205ENST00000417012 SLC35E4Q6ICL7 350 aa10.69□□□□□ -0.7
LRRTM1-205ENST00000417012 TMEM256Q8N2U0 113 aa10.69□□□□□ -0.7
LRRTM1-205ENST00000417012 POLR3KQ9Y2Y1 108 aaPredicted RBP10.69□□□□□ -0.7
LRRTM1-205ENST00000417012 KIR2DL5BA0A0G2JN68 375 aa10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 KIR2DL5BA0A0G2JPC4 375 aa10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 MARCH11A6NNE9 402 aa10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 NKX2-8O15522 239 aa10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 GCH1P30793 250 aa10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 AESQ08117 197 aa10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 GABRA6Q16445 453 aa10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 FBXW9Q5XUX1 488 aa10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 KIR2DL5AQ8N109 375 aa10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 MRGPRDQ8TDS7 321 aa10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 ELOVL5Q9NYP7 299 aa10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 A0A1B0GUS0 222 aa10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 PGPEP1LA6NFU8 196 aa10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 ZNF705FA8MVS1 300 aaPredicted RBP10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 ZNF705DP0CH99 300 aaPredicted RBP10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 ZNF705BP0CI00 300 aaPredicted RBP10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 ZNF25P17030 456 aaPredicted RBP10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 KITLGP21583 273 aa10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 GCNT2Q8N0V5 402 aa10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 ZNF114Q8NC26 417 aa10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 TXNDC17Q9BRA2 123 aa10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 MGAQ8IWI9 3026 aa10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 TRGV5A0A0B4J1U4 118 aa10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 TMEM210A6NLX4 147 aa10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 CELA3BP08861 270 aa10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 SELEP16581 610 aa10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 SOX8P57073 446 aa10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 Q8N7P7 452 aa10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 CMTM2Q8TAZ6 248 aa10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 HSD17B10Q99714 261 aaKnown RBP10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 QTRT1Q9BXR0 403 aaKnown RBP10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 PATZ1Q9HBE1 687 aaKnown RBP10.68□□□□□ -0.7
LRRTM1-205ENST00000417012 SPAARA0A1B0GVQ0 90 aa10.67□□□□□ -0.7
LRRTM1-205ENST00000417012 MPDU1O75352 247 aa10.67□□□□□ -0.7
LRRTM1-205ENST00000417012 CCL11P51671 97 aa10.67□□□□□ -0.7
LRRTM1-205ENST00000417012 ALKBH6Q3KRA9 238 aa10.67□□□□□ -0.7
LRRTM1-205ENST00000417012 SDSLQ96GA7 329 aa10.67□□□□□ -0.7
LRRTM1-205ENST00000417012 ZDHHC11Q9H8X9 412 aa10.67□□□□□ -0.7
LRRTM1-205ENST00000417012 RBFOX2O43251 390 aaKnown RBP eCLIP10.67□□□□□ -0.7
LRRTM1-205ENST00000417012 ADMP35318 185 aa10.67□□□□□ -0.7
LRRTM1-205ENST00000417012 PDLIM3Q53GG5 364 aaPredicted RBP10.67□□□□□ -0.7
LRRTM1-205ENST00000417012 TCF23Q7RTU1 214 aa10.67□□□□□ -0.7
LRRTM1-205ENST00000417012 WDR31Q8NA23 367 aa10.67□□□□□ -0.7
LRRTM1-205ENST00000417012 SLC25A40Q8TBP6 338 aa10.67□□□□□ -0.7
LRRTM1-205ENST00000417012 ZCCHC14Q8WYQ9 949 aaKnown RBP10.67□□□□□ -0.7
LRRTM1-205ENST00000417012 R3HDM4Q96D70 268 aa10.67□□□□□ -0.7
LRRTM1-205ENST00000417012 LINC00473A8K010 186 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms