RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 OVCH2Q7RTZ1 564 aa11.55□□□□□ -0.56
UBXN4-203ENST00000416538 SBSPONQ8IVN8 264 aa11.55□□□□□ -0.56
UBXN4-203ENST00000416538 GVQW1Q8N7I0 195 aa11.55□□□□□ -0.56
UBXN4-203ENST00000416538 TEX45Q8NA69 505 aa11.55□□□□□ -0.56
UBXN4-203ENST00000416538 ADTRPQ96IZ2 230 aa11.55□□□□□ -0.56
UBXN4-203ENST00000416538 DCSTAMPQ9H295 470 aa11.55□□□□□ -0.56
UBXN4-203ENST00000416538 COA4Q9NYJ1 87 aa11.55□□□□□ -0.56
UBXN4-203ENST00000416538 SMAD5-AS1Q9Y6J3 95 aa11.55□□□□□ -0.56
UBXN4-203ENST00000416538 A0A1B0GW64 132 aa11.54□□□□□ -0.56
UBXN4-203ENST00000416538 MSGN1A6NI15 193 aa11.54□□□□□ -0.56
UBXN4-203ENST00000416538 FCGR3BO75015 233 aa11.54□□□□□ -0.56
UBXN4-203ENST00000416538 BRI3O95415 125 aa11.54□□□□□ -0.56
UBXN4-203ENST00000416538 IGLV1-51P01701 117 aa11.54□□□□□ -0.56
UBXN4-203ENST00000416538 NHLRC4P0CG21 123 aaPredicted RBP11.54□□□□□ -0.56
UBXN4-203ENST00000416538 RRASP10301 218 aa11.54□□□□□ -0.56
UBXN4-203ENST00000416538 ARL6IP1Q15041 203 aa11.54□□□□□ -0.56
UBXN4-203ENST00000416538 VMA21Q3ZAQ7 101 aa11.54□□□□□ -0.56
UBXN4-203ENST00000416538 CNIH2Q6PI25 160 aa11.54□□□□□ -0.56
UBXN4-203ENST00000416538 VKORC1L1Q8N0U8 176 aa11.54□□□□□ -0.56
UBXN4-203ENST00000416538 OSR1Q8TAX0 266 aaPredicted RBP11.54□□□□□ -0.56
UBXN4-203ENST00000416538 ANXA10Q9UJ72 324 aa11.54□□□□□ -0.56
UBXN4-203ENST00000416538 DNAH7Q8WXX0 4024 aa11.54□□□□□ -0.56
UBXN4-203ENST00000416538 RYR3Q15413 4870 aa11.54□□□□□ -0.56
UBXN4-203ENST00000416538 C13orf42A0A1B0GVH6 325 aa11.53□□□□□ -0.56
UBXN4-203ENST00000416538 E7EUB6 86 aa11.53□□□□□ -0.56
UBXN4-203ENST00000416538 FCER2P06734 321 aa11.53□□□□□ -0.56
UBXN4-203ENST00000416538 FRMD6-AS1P0C7T7 363 aa11.53□□□□□ -0.56
UBXN4-203ENST00000416538 CD36P16671 472 aa11.53□□□□□ -0.56
UBXN4-203ENST00000416538 CBX3Q13185 183 aa11.53□□□□□ -0.56
UBXN4-203ENST00000416538 KLF5Q13887 457 aaPredicted RBP11.53□□□□□ -0.56
UBXN4-203ENST00000416538 CDK10Q15131 360 aa11.53□□□□□ -0.56
UBXN4-203ENST00000416538 KCTD21Q4G0X4 260 aa11.53□□□□□ -0.56
UBXN4-203ENST00000416538 IDNKQ5T6J7 187 aa11.53□□□□□ -0.56
UBXN4-203ENST00000416538 ZNF343Q6P1L6 599 aa11.53□□□□□ -0.56
UBXN4-203ENST00000416538 OR6Q1Q8NGQ2 317 aa11.53□□□□□ -0.56
UBXN4-203ENST00000416538 ACOT12Q8WYK0 555 aa11.53□□□□□ -0.56
UBXN4-203ENST00000416538 TRAV18A0A075B6X5 111 aa11.52□□□□□ -0.57
UBXN4-203ENST00000416538 OR9G9P0C7N8 305 aa11.52□□□□□ -0.57
UBXN4-203ENST00000416538 CD40LGP29965 261 aa11.52□□□□□ -0.57
UBXN4-203ENST00000416538 SYNJ2BPP57105 145 aa11.52□□□□□ -0.57
UBXN4-203ENST00000416538 Q8N1Y9 231 aa11.52□□□□□ -0.57
UBXN4-203ENST00000416538 SNAPC3Q92966 411 aa11.52□□□□□ -0.57
UBXN4-203ENST00000416538 TMEM68Q96MH6 324 aa11.52□□□□□ -0.57
UBXN4-203ENST00000416538 PHB2Q99623 299 aa11.52□□□□□ -0.57
UBXN4-203ENST00000416538 RSRP1Q9BUV0 290 aa11.52□□□□□ -0.57
UBXN4-203ENST00000416538 RANGRFQ9HD47 186 aaPredicted RBP11.52□□□□□ -0.57
UBXN4-203ENST00000416538 AKIP1Q9NQ31 210 aa11.52□□□□□ -0.57
UBXN4-203ENST00000416538 TAS2R8Q9NYW2 309 aa11.52□□□□□ -0.57
UBXN4-203ENST00000416538 SPATA2Q9UM82 520 aa11.52□□□□□ -0.57
UBXN4-203ENST00000416538 ETV7Q9Y603 341 aa11.52□□□□□ -0.57
UBXN4-203ENST00000416538 HMX3A6NHT5 357 aa11.51□□□□□ -0.57
UBXN4-203ENST00000416538 TEX22C9J3V5 150 aa11.51□□□□□ -0.57
UBXN4-203ENST00000416538 SCGNO76038 276 aa11.51□□□□□ -0.57
UBXN4-203ENST00000416538 CTXN2P0C2S0 81 aa11.51□□□□□ -0.57
UBXN4-203ENST00000416538 MYOD1P15172 320 aa11.51□□□□□ -0.57
UBXN4-203ENST00000416538 ZP3P21754 424 aa11.51□□□□□ -0.57
UBXN4-203ENST00000416538 AADACP22760 399 aa11.51□□□□□ -0.57
UBXN4-203ENST00000416538 PUSL1Q8N0Z8 303 aaKnown RBP11.51□□□□□ -0.57
UBXN4-203ENST00000416538 BEST4Q8NFU0 473 aa11.51□□□□□ -0.57
UBXN4-203ENST00000416538 OR9G4Q8NGQ1 327 aa11.51□□□□□ -0.57
UBXN4-203ENST00000416538 OR4C12Q96R67 309 aa11.51□□□□□ -0.57
UBXN4-203ENST00000416538 AUNIPQ9H7T9 357 aa11.51□□□□□ -0.57
UBXN4-203ENST00000416538 CCL28Q9NRJ3 127 aa11.51□□□□□ -0.57
UBXN4-203ENST00000416538 TRBV9A0A0B4J1U6 114 aa11.5□□□□□ -0.57
UBXN4-203ENST00000416538 A0A0G2JLM5 398 aa11.5□□□□□ -0.57
UBXN4-203ENST00000416538 BMPR1BO00238 502 aa11.5□□□□□ -0.57
UBXN4-203ENST00000416538 TNFSF12O43508 249 aa11.5□□□□□ -0.57
UBXN4-203ENST00000416538 KBTBD11O94819 623 aa11.5□□□□□ -0.57
UBXN4-203ENST00000416538 EDN2P20800 178 aa11.5□□□□□ -0.57
UBXN4-203ENST00000416538 SCAND1P57086 179 aa11.5□□□□□ -0.57
UBXN4-203ENST00000416538 RHOGP84095 191 aa11.5□□□□□ -0.57
UBXN4-203ENST00000416538 EXOSC2Q13868 293 aaKnown RBP11.5□□□□□ -0.57
UBXN4-203ENST00000416538 LCE2AQ5TA79 106 aaPredicted RBP11.5□□□□□ -0.57
UBXN4-203ENST00000416538 HOGA1Q86XE5 327 aa11.5□□□□□ -0.57
UBXN4-203ENST00000416538 MMD2Q8IY49 270 aa11.5□□□□□ -0.57
UBXN4-203ENST00000416538 OR13F1Q8NGS4 319 aa11.5□□□□□ -0.57
UBXN4-203ENST00000416538 TCTEX1D2Q8WW35 142 aa11.5□□□□□ -0.57
UBXN4-203ENST00000416538 THAP7Q9BT49 309 aaPredicted RBP11.5□□□□□ -0.57
UBXN4-203ENST00000416538 PEF1Q9UBV8 284 aaKnown RBP11.5□□□□□ -0.57
UBXN4-203ENST00000416538 IZUMO1RA6ND01 250 aa11.49□□□□□ -0.57
UBXN4-203ENST00000416538 MEIS3P1A6NDR6 274 aa11.49□□□□□ -0.57
UBXN4-203ENST00000416538 CGB1A6NKQ9 187 aa11.49□□□□□ -0.57
UBXN4-203ENST00000416538 MPPED1O15442 326 aa11.49□□□□□ -0.57
UBXN4-203ENST00000416538 CSN3P07498 182 aa11.49□□□□□ -0.57
UBXN4-203ENST00000416538 IL6RP08887 468 aaPredicted RBP11.49□□□□□ -0.57
UBXN4-203ENST00000416538 ADAMTSL5Q6ZMM2 481 aa11.49□□□□□ -0.57
UBXN4-203ENST00000416538 MFSD4AQ8N468 514 aa11.49□□□□□ -0.57
UBXN4-203ENST00000416538 OR4S2Q8NH73 311 aa11.49□□□□□ -0.57
UBXN4-203ENST00000416538 TMEM167AQ8TBQ9 72 aa11.49□□□□□ -0.57
UBXN4-203ENST00000416538 SECTM1Q8WVN6 248 aa11.49□□□□□ -0.57
UBXN4-203ENST00000416538 YIPF6Q96EC8 236 aa11.49□□□□□ -0.57
UBXN4-203ENST00000416538 RCHY1Q96PM5 261 aa11.49□□□□□ -0.57
UBXN4-203ENST00000416538 HSD17B10Q99714 261 aaKnown RBP11.49□□□□□ -0.57
UBXN4-203ENST00000416538 DCUN1D5Q9BTE7 237 aa11.49□□□□□ -0.57
UBXN4-203ENST00000416538 MRPS7Q9Y2R9 242 aaKnown RBP11.49□□□□□ -0.57
UBXN4-203ENST00000416538 PRELID3BQ9Y3B1 194 aa11.49□□□□□ -0.57
UBXN4-203ENST00000416538 DMRT1Q9Y5R6 373 aa11.49□□□□□ -0.57
UBXN4-203ENST00000416538 PPYP01298 95 aa11.48□□□□□ -0.57
UBXN4-203ENST00000416538 AREGP15514 252 aa11.48□□□□□ -0.57
UBXN4-203ENST00000416538 FCGR2CP31995 323 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms