RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 LPCAT3Q6P1A2 487 aa14.1□□□□□ -0.15
SEMA3B-201ENST00000416295 TMEM65Q6PI78 240 aa14.1□□□□□ -0.15
SEMA3B-201ENST00000416295 POC5Q8NA72 575 aa14.1□□□□□ -0.15
SEMA3B-201ENST00000416295 MINDY2Q8NBR6 621 aa14.1□□□□□ -0.15
SEMA3B-201ENST00000416295 GRPEL2Q8TAA5 225 aa14.1□□□□□ -0.15
SEMA3B-201ENST00000416295 CD300LFQ8TDQ1 290 aa14.1□□□□□ -0.15
SEMA3B-201ENST00000416295 SMIM4Q8WVI0 70 aa14.1□□□□□ -0.15
SEMA3B-201ENST00000416295 GPHA2Q96T91 129 aa14.1□□□□□ -0.15
SEMA3B-201ENST00000416295 FXYD6Q9H0Q3 95 aa14.1□□□□□ -0.15
SEMA3B-201ENST00000416295 FOXA2Q9Y261 457 aaPredicted RBP14.1□□□□□ -0.15
SEMA3B-201ENST00000416295 NUBP2Q9Y5Y2 271 aa14.1□□□□□ -0.15
SEMA3B-201ENST00000416295 A3GALT2U3KPV4 340 aa14.1□□□□□ -0.15
SEMA3B-201ENST00000416295 RBFOX2O43251 390 aaKnown RBP eCLIP14.09□□□□□ -0.152e-15■□□□□ 10.6
SEMA3B-201ENST00000416295 HRASP01112 189 aa14.09□□□□□ -0.15
SEMA3B-201ENST00000416295 IGLV1-40P01703 118 aa14.09□□□□□ -0.15
SEMA3B-201ENST00000416295 RPLP1P05386 114 aaKnown RBP14.09□□□□□ -0.15
SEMA3B-201ENST00000416295 SAA1P0DJI8 122 aaPredicted RBP14.09□□□□□ -0.15
SEMA3B-201ENST00000416295 EGR2P11161 476 aaPredicted RBP14.09□□□□□ -0.15
SEMA3B-201ENST00000416295 S100GP29377 79 aa14.09□□□□□ -0.15
SEMA3B-201ENST00000416295 TAS2R19P59542 299 aa14.09□□□□□ -0.15
SEMA3B-201ENST00000416295 DGCR2P98153 550 aa14.09□□□□□ -0.15
SEMA3B-201ENST00000416295 AKIRIN2Q53H80 203 aa14.09□□□□□ -0.15
SEMA3B-201ENST00000416295 AADACL3Q5VUY0 350 aa14.09□□□□□ -0.15
SEMA3B-201ENST00000416295 ZNF695Q8IW36 515 aa14.09□□□□□ -0.15
SEMA3B-201ENST00000416295 SPAG16Q8N0X2 631 aa14.09□□□□□ -0.15
SEMA3B-201ENST00000416295 ARRDC1Q8N5I2 433 aa14.09□□□□□ -0.15
SEMA3B-201ENST00000416295 KLHL30-AS1Q8NEE0 82 aa14.09□□□□□ -0.15
SEMA3B-201ENST00000416295 VSTM2AQ8TAG5 236 aa14.09□□□□□ -0.15
SEMA3B-201ENST00000416295 AIFM2Q9BRQ8 373 aa14.09□□□□□ -0.15
SEMA3B-201ENST00000416295 A0A1W2PN81 502 aa14.08□□□□□ -0.16
SEMA3B-201ENST00000416295 M0QYG6 137 aa14.08□□□□□ -0.16
SEMA3B-201ENST00000416295 GPR31O00270 319 aa14.08□□□□□ -0.16
SEMA3B-201ENST00000416295 ARPC1BO15143 372 aaKnown RBP14.08□□□□□ -0.16
SEMA3B-201ENST00000416295 CD3DP04234 171 aa14.08□□□□□ -0.16
SEMA3B-201ENST00000416295 TNFSF8P32971 234 aa14.08□□□□□ -0.16
SEMA3B-201ENST00000416295 CHRNA7P36544 502 aa14.08□□□□□ -0.16
SEMA3B-201ENST00000416295 CDX1P47902 265 aaPredicted RBP14.08□□□□□ -0.16
SEMA3B-201ENST00000416295 BRWD1-AS2P59051 145 aa14.08□□□□□ -0.16
SEMA3B-201ENST00000416295 PJVKQ0ZLH3 352 aa14.08□□□□□ -0.16
SEMA3B-201ENST00000416295 PRSS8Q16651 343 aa14.08□□□□□ -0.16
SEMA3B-201ENST00000416295 PDLIM3Q53GG5 364 aaPredicted RBP14.08□□□□□ -0.16
SEMA3B-201ENST00000416295 UNQ5815/PRO19632Q6UWF5 114 aa14.08□□□□□ -0.16
SEMA3B-201ENST00000416295 IDO2Q6ZQW0 420 aa14.08□□□□□ -0.16
SEMA3B-201ENST00000416295 LCNL1Q6ZST4 164 aa14.08□□□□□ -0.16
SEMA3B-201ENST00000416295 TMEM229BQ8NBD8 167 aa14.08□□□□□ -0.16
SEMA3B-201ENST00000416295 OR5M8Q8NGP6 311 aa14.08□□□□□ -0.16
SEMA3B-201ENST00000416295 OR51H1Q8NH63 302 aa14.08□□□□□ -0.16
SEMA3B-201ENST00000416295 FAM103A1Q9BTL3 118 aaKnown RBP14.08□□□□□ -0.16
SEMA3B-201ENST00000416295 VWFP04275 2813 aa14.07□□□□□ -0.16
SEMA3B-201ENST00000416295 NOTCH1P46531 2555 aa14.07□□□□□ -0.16
SEMA3B-201ENST00000416295 RAMP3O60896 148 aa14.07□□□□□ -0.16
SEMA3B-201ENST00000416295 ACTL6BO94805 426 aa14.07□□□□□ -0.16
SEMA3B-201ENST00000416295 RLN1P04808 185 aa14.07□□□□□ -0.16
SEMA3B-201ENST00000416295 CD40LGP29965 261 aa14.07□□□□□ -0.16
SEMA3B-201ENST00000416295 S100A5P33763 92 aa14.07□□□□□ -0.16
SEMA3B-201ENST00000416295 UCP3P55916 312 aa14.07□□□□□ -0.16
SEMA3B-201ENST00000416295 SSBP2P81877 361 aaPredicted RBP14.07□□□□□ -0.16
SEMA3B-201ENST00000416295 MMD2Q8IY49 270 aa14.07□□□□□ -0.16
SEMA3B-201ENST00000416295 LFNGQ8NES3 379 aa14.07□□□□□ -0.16
SEMA3B-201ENST00000416295 MYOZ3Q8TDC0 251 aa14.07□□□□□ -0.16
SEMA3B-201ENST00000416295 RHOVQ96L33 236 aa14.07□□□□□ -0.16
SEMA3B-201ENST00000416295 TMEM68Q96MH6 324 aa14.07□□□□□ -0.16
SEMA3B-201ENST00000416295 TINAGL1Q9GZM7 467 aaPredicted RBP14.07□□□□□ -0.16
SEMA3B-201ENST00000416295 FABP12A6NFH5 140 aa14.06□□□□□ -0.16
SEMA3B-201ENST00000416295 PGLYRP1O75594 196 aaPredicted RBP14.06□□□□□ -0.16
SEMA3B-201ENST00000416295 OR2A4O95047 310 aa14.06□□□□□ -0.16
SEMA3B-201ENST00000416295 RAB3DO95716 219 aa14.06□□□□□ -0.16
SEMA3B-201ENST00000416295 HPRT1P00492 218 aa14.06□□□□□ -0.16
SEMA3B-201ENST00000416295 CD74P04233 296 aa14.06□□□□□ -0.16
SEMA3B-201ENST00000416295 TNXAQ16473 311 aa14.06□□□□□ -0.16
SEMA3B-201ENST00000416295 MRGPRG-AS1Q2M3A8 158 aa14.06□□□□□ -0.16
SEMA3B-201ENST00000416295 STEAP1BQ6NZ63 245 aa14.06□□□□□ -0.16
SEMA3B-201ENST00000416295 C8orf86Q6ZUL3 223 aa14.06□□□□□ -0.16
SEMA3B-201ENST00000416295 SLC38A6Q8IZM9 456 aa14.06□□□□□ -0.16
SEMA3B-201ENST00000416295 VKORC1L1Q8N0U8 176 aa14.06□□□□□ -0.16
SEMA3B-201ENST00000416295 OR2A7Q96R45 310 aa14.06□□□□□ -0.16
SEMA3B-201ENST00000416295 RSRP1Q9BUV0 290 aa14.06□□□□□ -0.16
SEMA3B-201ENST00000416295 ZNF430Q9H8G1 570 aaPredicted RBP14.06□□□□□ -0.16
SEMA3B-201ENST00000416295 NDUFA13Q9P0J0 144 aa14.06□□□□□ -0.16
SEMA3B-201ENST00000416295 GSTZ1O43708 216 aaPredicted RBP14.05□□□□□ -0.16
SEMA3B-201ENST00000416295 SOX15O60248 233 aa14.05□□□□□ -0.16
SEMA3B-201ENST00000416295 KBTBD11O94819 623 aa14.05□□□□□ -0.16
SEMA3B-201ENST00000416295 RAB9AP51151 201 aa14.05□□□□□ -0.16
SEMA3B-201ENST00000416295 TAS2R31P59538 309 aa14.05□□□□□ -0.16
SEMA3B-201ENST00000416295 MEF2DQ14814 521 aa14.05□□□□□ -0.16
SEMA3B-201ENST00000416295 C18orf65Q6ZTR6 163 aa14.05□□□□□ -0.16
SEMA3B-201ENST00000416295 PUSL1Q8N0Z8 303 aaKnown RBP14.05□□□□□ -0.16
SEMA3B-201ENST00000416295 C4orf3Q8WVX3 66 aa14.05□□□□□ -0.16
SEMA3B-201ENST00000416295 UBE2E2Q96LR5 201 aa14.05□□□□□ -0.16
SEMA3B-201ENST00000416295 SOSTQ9BQB4 213 aa14.05□□□□□ -0.16
SEMA3B-201ENST00000416295 KLK15Q9H2R5 256 aa14.05□□□□□ -0.16
SEMA3B-201ENST00000416295 PLEKHA2Q9HB19 425 aa14.05□□□□□ -0.16
SEMA3B-201ENST00000416295 COMMD9Q9P000 198 aa14.05□□□□□ -0.16
SEMA3B-201ENST00000416295 NQO2P16083 231 aa14.04□□□□□ -0.16
SEMA3B-201ENST00000416295 CD33P20138 364 aa14.04□□□□□ -0.16
SEMA3B-201ENST00000416295 F2RP25116 425 aa14.04□□□□□ -0.16
SEMA3B-201ENST00000416295 MYCNOSP40205 109 aa14.04□□□□□ -0.16
SEMA3B-201ENST00000416295 PHLDA2Q53GA4 152 aa14.04□□□□□ -0.16
SEMA3B-201ENST00000416295 LHFPL1Q86WI0 220 aa14.04□□□□□ -0.16
SEMA3B-201ENST00000416295 OR4A5Q8NH83 315 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms