RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 HARBI1Q96MB7 349 aa11.54□□□□□ -0.56
HMGA1P1-201ENST00000415560 MFFQ9GZY8 342 aa11.54□□□□□ -0.56
HMGA1P1-201ENST00000415560 MBD2Q9UBB5 411 aa11.54□□□□□ -0.56
HMGA1P1-201ENST00000415560 HILPDAQ9Y5L2 63 aa11.54□□□□□ -0.56
HMGA1P1-201ENST00000415560 UTP20O75691 2785 aaKnown RBP11.54□□□□□ -0.56
HMGA1P1-201ENST00000415560 A0A0D9SG52 128 aa11.53□□□□□ -0.56
HMGA1P1-201ENST00000415560 A0A0G2JRQ6 117 aa11.53□□□□□ -0.56
HMGA1P1-201ENST00000415560 CENPVL3A0A0U1RRI6 287 aa11.53□□□□□ -0.56
HMGA1P1-201ENST00000415560 G3V3Q6 166 aa11.53□□□□□ -0.56
HMGA1P1-201ENST00000415560 NPFFO15130 113 aa11.53□□□□□ -0.56
HMGA1P1-201ENST00000415560 ARPC5O15511 151 aa11.53□□□□□ -0.56
HMGA1P1-201ENST00000415560 DEDDO75618 318 aa11.53□□□□□ -0.56
HMGA1P1-201ENST00000415560 LY86O95711 162 aa11.53□□□□□ -0.56
HMGA1P1-201ENST00000415560 P0C879 139 aa11.53□□□□□ -0.56
HMGA1P1-201ENST00000415560 BRS3P32247 399 aa11.53□□□□□ -0.56
HMGA1P1-201ENST00000415560 CYB5R2Q6BCY4 276 aa11.53□□□□□ -0.56
HMGA1P1-201ENST00000415560 Q6ZRM9 215 aa11.53□□□□□ -0.56
HMGA1P1-201ENST00000415560 ACOT7LQ6ZUV0 252 aa11.53□□□□□ -0.56
HMGA1P1-201ENST00000415560 OR4A5Q8NH83 315 aa11.53□□□□□ -0.56
HMGA1P1-201ENST00000415560 TSNAXQ99598 290 aaKnown RBP11.53□□□□□ -0.56
HMGA1P1-201ENST00000415560 RNF126Q9BV68 326 aa11.53□□□□□ -0.56
HMGA1P1-201ENST00000415560 TMEM140Q9NV12 185 aa11.53□□□□□ -0.56
HMGA1P1-201ENST00000415560 FKBP11Q9NYL4 201 aa11.53□□□□□ -0.56
HMGA1P1-201ENST00000415560 RCL1Q9Y2P8 373 aaKnown RBP11.53□□□□□ -0.56
HMGA1P1-201ENST00000415560 DCHS2Q6V1P9 2916 aa11.53□□□□□ -0.56
HMGA1P1-201ENST00000415560 COL12A1Q99715 3063 aa11.52□□□□□ -0.56
HMGA1P1-201ENST00000415560 IGHV1-69DA0A0B4J2H0 117 aa11.52□□□□□ -0.57
HMGA1P1-201ENST00000415560 GPR137BO60478 399 aa11.52□□□□□ -0.57
HMGA1P1-201ENST00000415560 OR2F2O95006 317 aa11.52□□□□□ -0.57
HMGA1P1-201ENST00000415560 IGHV1-69P01742 117 aa11.52□□□□□ -0.57
HMGA1P1-201ENST00000415560 IGKV1-16P04430 117 aa11.52□□□□□ -0.57
HMGA1P1-201ENST00000415560 P2RY1P47900 373 aa11.52□□□□□ -0.57
HMGA1P1-201ENST00000415560 RPL23AP62750 156 aaKnown RBP11.52□□□□□ -0.57
HMGA1P1-201ENST00000415560 OR2F1Q13607 317 aa11.52□□□□□ -0.57
HMGA1P1-201ENST00000415560 SSX2Q16385 188 aa11.52□□□□□ -0.57
HMGA1P1-201ENST00000415560 TMEM249Q2WGJ8 235 aa11.52□□□□□ -0.57
HMGA1P1-201ENST00000415560 CXorf66Q5JRM2 361 aaPredicted RBP11.52□□□□□ -0.57
HMGA1P1-201ENST00000415560 OR4A47Q6IF82 309 aa11.52□□□□□ -0.57
HMGA1P1-201ENST00000415560 LHFPL4Q7Z7J7 247 aa11.52□□□□□ -0.57
HMGA1P1-201ENST00000415560 OR52E5Q8NH55 327 aa11.52□□□□□ -0.57
HMGA1P1-201ENST00000415560 GRPEL2Q8TAA5 225 aa11.52□□□□□ -0.57
HMGA1P1-201ENST00000415560 RAB40CQ96S21 281 aa11.52□□□□□ -0.57
HMGA1P1-201ENST00000415560 CLCC1Q96S66 551 aa11.52□□□□□ -0.57
HMGA1P1-201ENST00000415560 ZC4H2Q9NQZ6 224 aa11.52□□□□□ -0.57
HMGA1P1-201ENST00000415560 BET1LQ9NYM9 111 aa11.52□□□□□ -0.57
HMGA1P1-201ENST00000415560 PRNDQ9UKY0 176 aa11.52□□□□□ -0.57
HMGA1P1-201ENST00000415560 TNFSF18Q9UNG2 199 aa11.52□□□□□ -0.57
HMGA1P1-201ENST00000415560 HSPB11Q9Y547 144 aa11.52□□□□□ -0.57
HMGA1P1-201ENST00000415560 TENM4Q6N022 2769 aa11.51□□□□□ -0.57
HMGA1P1-201ENST00000415560 A0A1W2PPI3 338 aa11.51□□□□□ -0.57
HMGA1P1-201ENST00000415560 H0YIZ8 118 aa11.51□□□□□ -0.57
HMGA1P1-201ENST00000415560 UPK2O00526 184 aa11.51□□□□□ -0.57
HMGA1P1-201ENST00000415560 SYNGR2O43760 224 aa11.51□□□□□ -0.57
HMGA1P1-201ENST00000415560 IFNA17P01571 189 aa11.51□□□□□ -0.57
HMGA1P1-201ENST00000415560 OR9G9P0C7N8 305 aa11.51□□□□□ -0.57
HMGA1P1-201ENST00000415560 IGHV4-31P0DP07 118 aa11.51□□□□□ -0.57
HMGA1P1-201ENST00000415560 BPIFB3P59826 476 aa11.51□□□□□ -0.57
HMGA1P1-201ENST00000415560 POLR2GP62487 172 aaKnown RBP eCLIP11.51□□□□□ -0.57
HMGA1P1-201ENST00000415560 RELBQ01201 579 aa11.51□□□□□ -0.57
HMGA1P1-201ENST00000415560 IZUMO4Q1ZYL8 232 aa11.51□□□□□ -0.57
HMGA1P1-201ENST00000415560 LGALSLQ3ZCW2 172 aaPredicted RBP11.51□□□□□ -0.57
HMGA1P1-201ENST00000415560 ZNF429Q86V71 674 aa11.51□□□□□ -0.57
HMGA1P1-201ENST00000415560 C9orf62Q8N4C0 152 aa11.51□□□□□ -0.57
HMGA1P1-201ENST00000415560 TEX45Q8NA69 505 aa11.51□□□□□ -0.57
HMGA1P1-201ENST00000415560 OR2T10Q8NGZ9 312 aa11.51□□□□□ -0.57
HMGA1P1-201ENST00000415560 CIB3Q96Q77 187 aaPredicted RBP11.51□□□□□ -0.57
HMGA1P1-201ENST00000415560 SLC25A31Q9H0C2 315 aa11.51□□□□□ -0.57
HMGA1P1-201ENST00000415560 OR5AC2Q9NZP5 309 aa11.51□□□□□ -0.57
HMGA1P1-201ENST00000415560 IGHV3-72A0A0B4J1Y9 119 aa11.5□□□□□ -0.57
HMGA1P1-201ENST00000415560 TIMM23O14925 209 aa11.5□□□□□ -0.57
HMGA1P1-201ENST00000415560 CHST1O43916 411 aa11.5□□□□□ -0.57
HMGA1P1-201ENST00000415560 KBTBD11O94819 623 aa11.5□□□□□ -0.57
HMGA1P1-201ENST00000415560 MOSP00540 346 aa11.5□□□□□ -0.57
HMGA1P1-201ENST00000415560 S100A11P31949 105 aa11.5□□□□□ -0.57
HMGA1P1-201ENST00000415560 SAA4P35542 130 aa11.5□□□□□ -0.57
HMGA1P1-201ENST00000415560 SPCS3P61009 180 aa11.5□□□□□ -0.57
HMGA1P1-201ENST00000415560 UBE2KP61086 200 aa11.5□□□□□ -0.57
HMGA1P1-201ENST00000415560 TNFRSF9Q07011 255 aa11.5□□□□□ -0.57
HMGA1P1-201ENST00000415560 HABP2Q14520 560 aaPredicted RBP11.5□□□□□ -0.57
HMGA1P1-201ENST00000415560 ZNF345Q14585 488 aa11.5□□□□□ -0.57
HMGA1P1-201ENST00000415560 KRTAP1-3Q8IUG1 177 aa11.5□□□□□ -0.57
HMGA1P1-201ENST00000415560 VKORC1L1Q8N0U8 176 aa11.5□□□□□ -0.57
HMGA1P1-201ENST00000415560 PUSL1Q8N0Z8 303 aaKnown RBP11.5□□□□□ -0.57
HMGA1P1-201ENST00000415560 TEX29Q8N6K0 151 aa11.5□□□□□ -0.57
HMGA1P1-201ENST00000415560 MAGT1Q9H0U3 335 aa11.5□□□□□ -0.57
HMGA1P1-201ENST00000415560 ENY2Q9NPA8 101 aa11.5□□□□□ -0.57
HMGA1P1-201ENST00000415560 HSPB7Q9UBY9 170 aa11.5□□□□□ -0.57
HMGA1P1-201ENST00000415560 NUP50Q9UKX7 468 aa11.5□□□□□ -0.57
HMGA1P1-201ENST00000415560 TRAV40A0A0B4J280 105 aa11.49□□□□□ -0.57
HMGA1P1-201ENST00000415560 SRRM4A7MD48 611 aaKnown RBP11.49□□□□□ -0.57
HMGA1P1-201ENST00000415560 CEBPZOSA8MTT3 80 aa11.49□□□□□ -0.57
HMGA1P1-201ENST00000415560 SSSCA1O60232 199 aa11.49□□□□□ -0.57
HMGA1P1-201ENST00000415560 NXPH3O95157 252 aa11.49□□□□□ -0.57
HMGA1P1-201ENST00000415560 IL6RP08887 468 aaPredicted RBP11.49□□□□□ -0.57
HMGA1P1-201ENST00000415560 FGF2P09038 288 aa11.49□□□□□ -0.57
HMGA1P1-201ENST00000415560 FAM106CPP0CH98 169 aa11.49□□□□□ -0.57
HMGA1P1-201ENST00000415560 SAA1P0DJI8 122 aaPredicted RBP11.49□□□□□ -0.57
HMGA1P1-201ENST00000415560 RPL12P30050 165 aaKnown RBP11.49□□□□□ -0.57
HMGA1P1-201ENST00000415560 AP2S1P53680 142 aaPredicted RBP11.49□□□□□ -0.57
HMGA1P1-201ENST00000415560 TAS2R30P59541 319 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms