RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 ZFAND1Q8TCF1 268 aa11.54□□□□□ -0.56
LIMS1-206ENST00000414829 ARPC1AQ92747 370 aa11.54□□□□□ -0.56
LIMS1-206ENST00000414829 TMEM68Q96MH6 324 aa11.54□□□□□ -0.56
LIMS1-206ENST00000414829 NOL4LQ96MY1 436 aaPredicted RBP11.54□□□□□ -0.56
LIMS1-206ENST00000414829 PLEKHA2Q9HB19 425 aa11.54□□□□□ -0.56
LIMS1-206ENST00000414829 TRAV41A0A0B4J266 112 aa11.53□□□□□ -0.56
LIMS1-206ENST00000414829 ANKRD20A5PA0PJZ0 165 aa11.53□□□□□ -0.56
LIMS1-206ENST00000414829 PGLYRP1O75594 196 aaPredicted RBP11.53□□□□□ -0.56
LIMS1-206ENST00000414829 B3GALNT1O75752 331 aa11.53□□□□□ -0.56
LIMS1-206ENST00000414829 HPRT1P00492 218 aa11.53□□□□□ -0.56
LIMS1-206ENST00000414829 IGLV2-23P01705 113 aa11.53□□□□□ -0.56
LIMS1-206ENST00000414829 IGHG4P01861 327 aa11.53□□□□□ -0.56
LIMS1-206ENST00000414829 RLN1P04808 185 aa11.53□□□□□ -0.56
LIMS1-206ENST00000414829 FGF2P09038 288 aa11.53□□□□□ -0.56
LIMS1-206ENST00000414829 SAA1P0DJI8 122 aaPredicted RBP11.53□□□□□ -0.56
LIMS1-206ENST00000414829 CD28P10747 220 aa11.53□□□□□ -0.56
LIMS1-206ENST00000414829 SCGB2B2Q4G0G5 96 aa11.53□□□□□ -0.56
LIMS1-206ENST00000414829 OR2B11Q5JQS5 317 aa11.53□□□□□ -0.56
LIMS1-206ENST00000414829 TMEM65Q6PI78 240 aa11.53□□□□□ -0.56
LIMS1-206ENST00000414829 LHFPL1Q86WI0 220 aa11.53□□□□□ -0.56
LIMS1-206ENST00000414829 MMD2Q8IY49 270 aa11.53□□□□□ -0.56
LIMS1-206ENST00000414829 Q8N402 240 aa11.53□□□□□ -0.56
LIMS1-206ENST00000414829 C11orf44Q8N8P7 122 aa11.53□□□□□ -0.56
LIMS1-206ENST00000414829 CCDC71LQ8N9Z2 235 aa11.53□□□□□ -0.56
LIMS1-206ENST00000414829 OR4A5Q8NH83 315 aa11.53□□□□□ -0.56
LIMS1-206ENST00000414829 TERB2Q8NHR7 220 aa11.53□□□□□ -0.56
LIMS1-206ENST00000414829 RHOVQ96L33 236 aa11.53□□□□□ -0.56
LIMS1-206ENST00000414829 SCGB3A2Q96PL1 93 aa11.53□□□□□ -0.56
LIMS1-206ENST00000414829 CITED2Q99967 270 aaPredicted RBP11.53□□□□□ -0.56
LIMS1-206ENST00000414829 RSRP1Q9BUV0 290 aa11.53□□□□□ -0.56
LIMS1-206ENST00000414829 TINAGL1Q9GZM7 467 aaPredicted RBP11.53□□□□□ -0.56
LIMS1-206ENST00000414829 BATF3Q9NR55 127 aa11.53□□□□□ -0.56
LIMS1-206ENST00000414829 SCP2D1Q9UJQ7 156 aa11.53□□□□□ -0.56
LIMS1-206ENST00000414829 FOXA2Q9Y261 457 aaPredicted RBP11.53□□□□□ -0.56
LIMS1-206ENST00000414829 V9GYH0 126 aa11.53□□□□□ -0.56
LIMS1-206ENST00000414829 OR2A4O95047 310 aa11.52□□□□□ -0.57
LIMS1-206ENST00000414829 NQO2P16083 231 aa11.52□□□□□ -0.57
LIMS1-206ENST00000414829 F2RP25116 425 aa11.52□□□□□ -0.57
LIMS1-206ENST00000414829 RND3P61587 244 aa11.52□□□□□ -0.57
LIMS1-206ENST00000414829 FXYD3Q14802 87 aa11.52□□□□□ -0.57
LIMS1-206ENST00000414829 PRSS8Q16651 343 aa11.52□□□□□ -0.57
LIMS1-206ENST00000414829 AKIRIN2Q53H80 203 aa11.52□□□□□ -0.57
LIMS1-206ENST00000414829 LINC00299Q6ZSB3 139 aa11.52□□□□□ -0.57
LIMS1-206ENST00000414829 ZNF329Q86UD4 541 aa11.52□□□□□ -0.57
LIMS1-206ENST00000414829 RNF152Q8N8N0 203 aa11.52□□□□□ -0.57
LIMS1-206ENST00000414829 GDPD1Q8N9F7 314 aa11.52□□□□□ -0.57
LIMS1-206ENST00000414829 OR5M8Q8NGP6 311 aa11.52□□□□□ -0.57
LIMS1-206ENST00000414829 OR6Q1Q8NGQ2 317 aa11.52□□□□□ -0.57
LIMS1-206ENST00000414829 OR2A7Q96R45 310 aa11.52□□□□□ -0.57
LIMS1-206ENST00000414829 THAP7Q9BT49 309 aaPredicted RBP11.52□□□□□ -0.57
LIMS1-206ENST00000414829 SLC2A9Q9NRM0 540 aa11.52□□□□□ -0.57
LIMS1-206ENST00000414829 SLC2A8Q9NY64 477 aa11.52□□□□□ -0.57
LIMS1-206ENST00000414829 KBTBD11O94819 623 aa11.51□□□□□ -0.57
LIMS1-206ENST00000414829 CRYGBP07316 175 aa11.51□□□□□ -0.57
LIMS1-206ENST00000414829 PF4V1P10720 104 aa11.51□□□□□ -0.57
LIMS1-206ENST00000414829 MAS1LP35410 378 aa11.51□□□□□ -0.57
LIMS1-206ENST00000414829 INPP1P49441 399 aa11.51□□□□□ -0.57
LIMS1-206ENST00000414829 GNB1P62873 340 aa11.51□□□□□ -0.57
LIMS1-206ENST00000414829 CFHR3Q02985 330 aa11.51□□□□□ -0.57
LIMS1-206ENST00000414829 POU2AF1Q16633 256 aa11.51□□□□□ -0.57
LIMS1-206ENST00000414829 ECSCRQ19T08 205 aa11.51□□□□□ -0.57
LIMS1-206ENST00000414829 CADM3Q8N126 398 aa11.51□□□□□ -0.57
LIMS1-206ENST00000414829 TOMM5Q8N4H5 51 aa11.51□□□□□ -0.57
LIMS1-206ENST00000414829 OR4C16Q8NGL9 310 aa11.51□□□□□ -0.57
LIMS1-206ENST00000414829 GRPEL2Q8TAA5 225 aa11.51□□□□□ -0.57
LIMS1-206ENST00000414829 CLCC1Q96S66 551 aa11.51□□□□□ -0.57
LIMS1-206ENST00000414829 SPIN2AQ99865 258 aa11.51□□□□□ -0.57
LIMS1-206ENST00000414829 SPIN2BQ9BPZ2 258 aa11.51□□□□□ -0.57
LIMS1-206ENST00000414829 BET1LQ9NYM9 111 aa11.51□□□□□ -0.57
LIMS1-206ENST00000414829 LINC00527Q9UJ94 153 aa11.51□□□□□ -0.57
LIMS1-206ENST00000414829 C14orf166Q9Y224 244 aaKnown RBP11.51□□□□□ -0.57
LIMS1-206ENST00000414829 TENM1Q9UKZ4 2725 aa11.5□□□□□ -0.57
LIMS1-206ENST00000414829 SRRM4A7MD48 611 aaKnown RBP11.5□□□□□ -0.57
LIMS1-206ENST00000414829 H3BUA1 57 aa11.5□□□□□ -0.57
LIMS1-206ENST00000414829 ATG12O94817 140 aa11.5□□□□□ -0.57
LIMS1-206ENST00000414829 RPA2P15927 270 aa11.5□□□□□ -0.57
LIMS1-206ENST00000414829 PPP5CP53041 499 aa11.5□□□□□ -0.57
LIMS1-206ENST00000414829 NDPQ00604 133 aa11.5□□□□□ -0.57
LIMS1-206ENST00000414829 ZNF45Q02386 682 aa11.5□□□□□ -0.57
LIMS1-206ENST00000414829 NSUN5P1Q3KNT7 163 aa11.5□□□□□ -0.57
LIMS1-206ENST00000414829 PHLDA2Q53GA4 152 aa11.5□□□□□ -0.57
LIMS1-206ENST00000414829 FOXB2Q5VYV0 432 aa11.5□□□□□ -0.57
LIMS1-206ENST00000414829 TRIQKQ629K1 86 aa11.5□□□□□ -0.57
LIMS1-206ENST00000414829 TREML4Q6UXN2 200 aa11.5□□□□□ -0.57
LIMS1-206ENST00000414829 MINDY2Q8NBR6 621 aa11.5□□□□□ -0.57
LIMS1-206ENST00000414829 DMBX1Q8NFW5 382 aa11.5□□□□□ -0.57
LIMS1-206ENST00000414829 TMEM167AQ8TBQ9 72 aa11.5□□□□□ -0.57
LIMS1-206ENST00000414829 TPSG1Q9NRR2 321 aa11.5□□□□□ -0.57
LIMS1-206ENST00000414829 MCUBQ9NWR8 336 aa11.5□□□□□ -0.57
LIMS1-206ENST00000414829 COPZ2Q9P299 210 aa11.5□□□□□ -0.57
LIMS1-206ENST00000414829 PIGBOS1A0A0B4J2F0 54 aa11.49□□□□□ -0.57
LIMS1-206ENST00000414829 LINC01548A6NM66 108 aa11.49□□□□□ -0.57
LIMS1-206ENST00000414829 NUDT19A8MXV4 375 aa11.49□□□□□ -0.57
LIMS1-206ENST00000414829 FCN1O00602 326 aa11.49□□□□□ -0.57
LIMS1-206ENST00000414829 RAMP3O60896 148 aa11.49□□□□□ -0.57
LIMS1-206ENST00000414829 SERPINE2P07093 398 aa11.49□□□□□ -0.57
LIMS1-206ENST00000414829 CTSDP07339 412 aaPredicted RBP11.49□□□□□ -0.57
LIMS1-206ENST00000414829 PSMB8P28062 276 aa11.49□□□□□ -0.57
LIMS1-206ENST00000414829 PPIFP30405 207 aaKnown RBP11.49□□□□□ -0.57
LIMS1-206ENST00000414829 PIGPP57054 158 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms