RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 RAB2AP61019 212 aa12.64□□□□□ -0.39
LRCH3-202ENST00000414675 HNF4GQ14541 408 aa12.64□□□□□ -0.39
LRCH3-202ENST00000414675 SOHLH1Q5JUK2 328 aa12.64□□□□□ -0.39
LRCH3-202ENST00000414675 LYPD2Q6UXB3 125 aa12.64□□□□□ -0.39
LRCH3-202ENST00000414675 LYG1Q8N1E2 194 aa12.64□□□□□ -0.39
LRCH3-202ENST00000414675 SFT2D1Q8WV19 159 aa12.64□□□□□ -0.39
LRCH3-202ENST00000414675 S1PR3Q99500 378 aa12.64□□□□□ -0.39
LRCH3-202ENST00000414675 EGLN1Q9GZT9 426 aa12.64□□□□□ -0.39
LRCH3-202ENST00000414675 SMDT1Q9H4I9 107 aa12.64□□□□□ -0.39
LRCH3-202ENST00000414675 NGBQ9NPG2 151 aa12.64□□□□□ -0.39
LRCH3-202ENST00000414675 SLC25A10Q9UBX3 287 aaPredicted RBP12.64□□□□□ -0.39
LRCH3-202ENST00000414675 GAB2Q9UQC2 676 aa12.64□□□□□ -0.39
LRCH3-202ENST00000414675 KLF2Q9Y5W3 355 aaPredicted RBP12.64□□□□□ -0.39
LRCH3-202ENST00000414675 TPRP12270 2363 aaKnown RBP12.64□□□□□ -0.39
LRCH3-202ENST00000414675 TRAV38-1A0A0B4J264 116 aa12.63□□□□□ -0.39
LRCH3-202ENST00000414675 FOLR2P14207 255 aa12.63□□□□□ -0.39
LRCH3-202ENST00000414675 DAOP14920 347 aa12.63□□□□□ -0.39
LRCH3-202ENST00000414675 HOXA1P49639 335 aaPredicted RBP12.63□□□□□ -0.39
LRCH3-202ENST00000414675 TLE4Q04727 773 aa12.63□□□□□ -0.39
LRCH3-202ENST00000414675 RHEBQ15382 184 aa12.63□□□□□ -0.39
LRCH3-202ENST00000414675 CDSNQ15517 529 aa12.63□□□□□ -0.39
LRCH3-202ENST00000414675 ZNF726P1Q15940 193 aa12.63□□□□□ -0.39
LRCH3-202ENST00000414675 AARDQ4LEZ3 155 aa12.63□□□□□ -0.39
LRCH3-202ENST00000414675 SSX7Q7RTT5 188 aa12.63□□□□□ -0.39
LRCH3-202ENST00000414675 HIST1H2BAQ96A08 127 aa12.63□□□□□ -0.39
LRCH3-202ENST00000414675 TMEM106BQ9NUM4 274 aa12.63□□□□□ -0.39
LRCH3-202ENST00000414675 RPUSD1Q9UJJ7 312 aaKnown RBP12.63□□□□□ -0.39
LRCH3-202ENST00000414675 PPIAL4EA0A075B759 164 aa12.63□□□□□ -0.39
LRCH3-202ENST00000414675 C1orf196B1AJZ1 125 aa12.63□□□□□ -0.39
LRCH3-202ENST00000414675 PPIAL4DF5H284 164 aa12.63□□□□□ -0.39
LRCH3-202ENST00000414675 PPIAL4FP0DN26 164 aa12.63□□□□□ -0.39
LRCH3-202ENST00000414675 MRPS11P82912 194 aaKnown RBP12.63□□□□□ -0.39
LRCH3-202ENST00000414675 KLRB1Q12918 225 aa12.63□□□□□ -0.39
LRCH3-202ENST00000414675 HAGHQ16775 308 aa12.63□□□□□ -0.39
LRCH3-202ENST00000414675 ZNF383Q8NA42 475 aa12.63□□□□□ -0.39
LRCH3-202ENST00000414675 TAF15Q92804 592 aaKnown RBP eCLIP12.63□□□□□ -0.39
LRCH3-202ENST00000414675 PSMG3Q9BT73 122 aaPredicted RBP12.63□□□□□ -0.39
LRCH3-202ENST00000414675 RAB9BQ9NP90 201 aa12.63□□□□□ -0.39
LRCH3-202ENST00000414675 DYNLRB1Q9NP97 96 aa12.63□□□□□ -0.39
LRCH3-202ENST00000414675 PPIAL4AQ9Y536 164 aa12.63□□□□□ -0.39
LRCH3-202ENST00000414675 PUS1Q9Y606 427 aaKnown RBP eCLIP12.63□□□□□ -0.39
LRCH3-202ENST00000414675 TNFRSF13BO14836 293 aaPredicted RBP12.62□□□□□ -0.39
LRCH3-202ENST00000414675 MT-ND4LP03901 98 aa12.62□□□□□ -0.39
LRCH3-202ENST00000414675 OR8U8P0C7N1 319 aa12.62□□□□□ -0.39
LRCH3-202ENST00000414675 CCL3L1P16619 93 aa12.62□□□□□ -0.39
LRCH3-202ENST00000414675 CEBPGP53567 150 aa12.62□□□□□ -0.39
LRCH3-202ENST00000414675 ISOC2Q96AB3 205 aa12.62□□□□□ -0.39
LRCH3-202ENST00000414675 PARD6GQ9BYG4 376 aaPredicted RBP12.62□□□□□ -0.39
LRCH3-202ENST00000414675 UNKLQ9H9P5 680 aaKnown RBP12.62□□□□□ -0.39
LRCH3-202ENST00000414675 TMEM140Q9NV12 185 aa12.62□□□□□ -0.39
LRCH3-202ENST00000414675 KIAA1456Q9P272 454 aa12.62□□□□□ -0.39
LRCH3-202ENST00000414675 LINC00312Q9Y6C7 94 aa12.62□□□□□ -0.39
LRCH3-202ENST00000414675 A0A1W2PPH5 198 aa12.62□□□□□ -0.39
LRCH3-202ENST00000414675 hADV38S2A0JD32 116 aa12.62□□□□□ -0.39
LRCH3-202ENST00000414675 C15orf62A8K5M9 175 aa12.62□□□□□ -0.39
LRCH3-202ENST00000414675 CCL21O00585 134 aa12.62□□□□□ -0.39
LRCH3-202ENST00000414675 SIAH2O43255 324 aa12.62□□□□□ -0.39
LRCH3-202ENST00000414675 HBE1P02100 147 aa12.62□□□□□ -0.39
LRCH3-202ENST00000414675 CASP6P55212 293 aa12.62□□□□□ -0.39
LRCH3-202ENST00000414675 RELBQ01201 579 aa12.62□□□□□ -0.39
LRCH3-202ENST00000414675 DPPA3Q6W0C5 159 aa12.62□□□□□ -0.39
LRCH3-202ENST00000414675 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.62□□□□□ -0.39
LRCH3-202ENST00000414675 ZCCHC14Q8WYQ9 949 aaKnown RBP12.62□□□□□ -0.39
LRCH3-202ENST00000414675 CIB3Q96Q77 187 aaPredicted RBP12.62□□□□□ -0.39
LRCH3-202ENST00000414675 TNCP24821 2201 aa12.61□□□□□ -0.39
LRCH3-202ENST00000414675 VSTM5A8MXK1 200 aa12.61□□□□□ -0.39
LRCH3-202ENST00000414675 EIF3GO75821 320 aaKnown RBP eCLIP12.61□□□□□ -0.39
LRCH3-202ENST00000414675 IFNA17P01571 189 aa12.61□□□□□ -0.39
LRCH3-202ENST00000414675 NQO2P16083 231 aa12.61□□□□□ -0.39
LRCH3-202ENST00000414675 ELLP55199 621 aaPredicted RBP12.61□□□□□ -0.39
LRCH3-202ENST00000414675 RPL31P62899 125 aaKnown RBP12.61□□□□□ -0.39
LRCH3-202ENST00000414675 SLC25A48Q6ZT89 311 aaKnown RBP12.61□□□□□ -0.39
LRCH3-202ENST00000414675 C1orf87Q8N0U7 546 aa12.61□□□□□ -0.39
LRCH3-202ENST00000414675 HIPK2Q9H2X6 1198 aa12.61□□□□□ -0.39
LRCH3-202ENST00000414675 TUBA4BQ9H853 241 aa12.61□□□□□ -0.39
LRCH3-202ENST00000414675 CTSZQ9UBR2 303 aa12.61□□□□□ -0.39
LRCH3-202ENST00000414675 PCP4L1A6NKN8 68 aa12.6□□□□□ -0.39
LRCH3-202ENST00000414675 FAM90A9PA6NNJ1 464 aa12.6□□□□□ -0.39
LRCH3-202ENST00000414675 CD3EP07766 207 aa12.6□□□□□ -0.39
LRCH3-202ENST00000414675 KIR2DS2P43631 304 aa12.6□□□□□ -0.39
LRCH3-202ENST00000414675 ERVK-16P61578 105 aa12.6□□□□□ -0.39
LRCH3-202ENST00000414675 TFF3Q07654 80 aa12.6□□□□□ -0.39
LRCH3-202ENST00000414675 HABP2Q14520 560 aaPredicted RBP12.6□□□□□ -0.39
LRCH3-202ENST00000414675 ST6GALNAC3Q8NDV1 305 aa12.6□□□□□ -0.39
LRCH3-202ENST00000414675 OR4A16Q8NH70 328 aa12.6□□□□□ -0.39
LRCH3-202ENST00000414675 OR4S2Q8NH73 311 aa12.6□□□□□ -0.39
LRCH3-202ENST00000414675 TMEM147Q9BVK8 224 aa12.6□□□□□ -0.39
LRCH3-202ENST00000414675 IGKV1D-33P01593 117 aa12.6□□□□□ -0.39
LRCH3-202ENST00000414675 IGKV1-33P01594 117 aa12.6□□□□□ -0.39
LRCH3-202ENST00000414675 ARG1P05089 322 aa12.6□□□□□ -0.39
LRCH3-202ENST00000414675 APOBEC3AP31941 199 aaPredicted RBP12.6□□□□□ -0.39
LRCH3-202ENST00000414675 THBS3P49746 956 aa12.6□□□□□ -0.39
LRCH3-202ENST00000414675 ADORA2A-AS1P86434 159 aa12.6□□□□□ -0.39
LRCH3-202ENST00000414675 ICAM4Q14773 271 aa12.6□□□□□ -0.39
LRCH3-202ENST00000414675 RNF212Q495C1 297 aa12.6□□□□□ -0.39
LRCH3-202ENST00000414675 TMEM200BQ69YZ2 307 aa12.6□□□□□ -0.39
LRCH3-202ENST00000414675 OR10P1Q8NGE3 313 aa12.6□□□□□ -0.39
LRCH3-202ENST00000414675 CLDND2Q8NHS1 167 aa12.6□□□□□ -0.39
LRCH3-202ENST00000414675 RCC1LQ96I51 464 aaKnown RBP12.6□□□□□ -0.39
LRCH3-202ENST00000414675 CACNA1AO00555 2505 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms