RNA–Protein interactions for RNA: ENST00000414416.2

LINC00116-201, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene LINC00116, Length 2,051 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-201ENST00000414416 HLA-GP17693 338 aa12.5□□□□□ -0.41
LINC00116-201ENST00000414416 RAB7AP51149 207 aa12.5□□□□□ -0.41
LINC00116-201ENST00000414416 LUMP51884 338 aaPredicted RBP12.5□□□□□ -0.41
LINC00116-201ENST00000414416 OR8U1Q8NH10 309 aa12.5□□□□□ -0.41
LINC00116-201ENST00000414416 AGMATQ9BSE5 352 aa12.5□□□□□ -0.41
LINC00116-201ENST00000414416 SLC5A7Q9GZV3 580 aa12.5□□□□□ -0.41
LINC00116-201ENST00000414416 DMRT1Q9Y5R6 373 aa12.5□□□□□ -0.41
LINC00116-201ENST00000414416 IGHV3OR16-10A0A075B7F0 116 aa12.49□□□□□ -0.41
LINC00116-201ENST00000414416 ODF3BA8MYP8 253 aa12.49□□□□□ -0.41
LINC00116-201ENST00000414416 IFNA2P01563 188 aa12.49□□□□□ -0.41
LINC00116-201ENST00000414416 IGHV4-38-2P0DP08 117 aa12.49□□□□□ -0.41
LINC00116-201ENST00000414416 SMCO1Q147U7 214 aa12.49□□□□□ -0.41
LINC00116-201ENST00000414416 HLA-DRB5Q30154 266 aa12.49□□□□□ -0.41
LINC00116-201ENST00000414416 CLEC9AQ6UXN8 241 aa12.49□□□□□ -0.41
LINC00116-201ENST00000414416 SLC16A13Q7RTY0 426 aa12.49□□□□□ -0.41
LINC00116-201ENST00000414416 FAM216AQ8WUB2 273 aa12.49□□□□□ -0.41
LINC00116-201ENST00000414416 NAA60Q9H7X0 242 aa12.49□□□□□ -0.41
LINC00116-201ENST00000414416 RNF150Q9ULK6 438 aa12.49□□□□□ -0.41
LINC00116-201ENST00000414416 IGHV1-69DA0A0B4J2H0 117 aa12.49□□□□□ -0.41
LINC00116-201ENST00000414416 C13orf42A0A1B0GVH6 325 aa12.49□□□□□ -0.41
LINC00116-201ENST00000414416 IGHV1-69P01742 117 aa12.49□□□□□ -0.41
LINC00116-201ENST00000414416 OR5AC1P0C628 307 aa12.49□□□□□ -0.41
LINC00116-201ENST00000414416 RPA2P15927 270 aa12.49□□□□□ -0.41
LINC00116-201ENST00000414416 LGALS4P56470 323 aa12.49□□□□□ -0.41
LINC00116-201ENST00000414416 KLF17Q5JT82 389 aaPredicted RBP12.49□□□□□ -0.41
LINC00116-201ENST00000414416 LYG1Q8N1E2 194 aa12.49□□□□□ -0.41
LINC00116-201ENST00000414416 TEX29Q8N6K0 151 aa12.49□□□□□ -0.41
LINC00116-201ENST00000414416 OR4P4Q8NGL7 312 aa12.49□□□□□ -0.41
LINC00116-201ENST00000414416 OR2D2Q9H210 308 aa12.49□□□□□ -0.41
LINC00116-201ENST00000414416 IFI27L2Q9H2X8 130 aa12.49□□□□□ -0.41
LINC00116-201ENST00000414416 A0A0B4J2A0 478 aa12.48□□□□□ -0.41
LINC00116-201ENST00000414416 BUB1B-PAK6H3BSN5 160 aa12.48□□□□□ -0.41
LINC00116-201ENST00000414416 HOXB5P09067 269 aa12.48□□□□□ -0.41
LINC00116-201ENST00000414416 PAX6P26367 422 aa12.48□□□□□ -0.41
LINC00116-201ENST00000414416 FAM120AOSQ5T036 256 aa12.48□□□□□ -0.41
LINC00116-201ENST00000414416 PHYHIPLQ96FC7 376 aa12.48□□□□□ -0.41
LINC00116-201ENST00000414416 ABHD14BQ96IU4 210 aa12.48□□□□□ -0.41
LINC00116-201ENST00000414416 SHPKQ9UHJ6 478 aa12.48□□□□□ -0.41
LINC00116-201ENST00000414416 CARHSP1Q9Y2V2 147 aaKnown RBP12.48□□□□□ -0.41
LINC00116-201ENST00000414416 AMMECR1Q9Y4X0 333 aaPredicted RBP12.48□□□□□ -0.41
LINC00116-201ENST00000414416 TMEM218A2RU14 115 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 NPFFO15130 113 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 MPPED1O15442 326 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 ARPC5O15511 151 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 TNFSF12O43508 249 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 IGLV2-14P01704 120 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 CRYBA1P05813 215 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 HTR1DP28221 377 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 TMEM187Q14656 261 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 MIDNQ504T8 468 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 BRD3OSQ6XYD6 125 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 PUSL1Q8N0Z8 303 aaKnown RBP12.47□□□□□ -0.41
LINC00116-201ENST00000414416 THAP6Q8TBB0 222 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 TP53RKQ96S44 253 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 TRAV14DV4A0A0A6YYC5 116 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 C5orf51A6NDU8 294 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 C5orf52A6NGY3 159 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 GPR31O00270 319 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 RAB29O14966 203 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 IL3RAP26951 378 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 SAA4P35542 130 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 GPR12P47775 334 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 RAB4BP61018 213 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 SRSF4Q08170 494 aaKnown RBP12.47□□□□□ -0.41
LINC00116-201ENST00000414416 C10orf91Q5T1B1 145 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 RUSC1-AS1Q66K80 236 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 TBC1D26Q86UD7 250 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 ODF3L1Q8IXM7 274 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 PIP4P2Q8N4L2 257 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 GALNT14Q96FL9 552 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 OR10C1Q96KK4 312 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 TMEM160Q9NX00 188 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 KCNIP3Q9Y2W7 256 aa12.47□□□□□ -0.41
LINC00116-201ENST00000414416 A0A0D9SG52 128 aa12.46□□□□□ -0.41
LINC00116-201ENST00000414416 C1orf196B1AJZ1 125 aa12.46□□□□□ -0.41
LINC00116-201ENST00000414416 FSHBP01225 129 aa12.46□□□□□ -0.41
LINC00116-201ENST00000414416 HNF1AP20823 631 aa12.46□□□□□ -0.41
LINC00116-201ENST00000414416 BPIFB3P59826 476 aa12.46□□□□□ -0.41
LINC00116-201ENST00000414416 DEFA6Q01524 100 aa12.46□□□□□ -0.41
LINC00116-201ENST00000414416 MINOS1Q5TGZ0 78 aa12.46□□□□□ -0.41
LINC00116-201ENST00000414416 LPCAT3Q6P1A2 487 aa12.46□□□□□ -0.41
LINC00116-201ENST00000414416 LHFPL4Q7Z7J7 247 aa12.46□□□□□ -0.41
LINC00116-201ENST00000414416 FAM219AQ8IW50 185 aa12.46□□□□□ -0.41
LINC00116-201ENST00000414416 ZNF645Q8N7E2 425 aa12.46□□□□□ -0.41
LINC00116-201ENST00000414416 DPM3Q9P2X0 92 aa12.46□□□□□ -0.41
LINC00116-201ENST00000414416 METTL1Q9UBP6 276 aaKnown RBP12.46□□□□□ -0.41
LINC00116-201ENST00000414416 TBL2Q9Y4P3 447 aaKnown RBP12.46□□□□□ -0.41
LINC00116-201ENST00000414416 MINOS1-NBL1R4GNA1 71 aa12.46□□□□□ -0.41
LINC00116-201ENST00000414416 TLN2Q9Y4G6 2542 aa12.46□□□□□ -0.41
LINC00116-201ENST00000414416 HIVEP1P15822 2718 aa12.46□□□□□ -0.42
LINC00116-201ENST00000414416 SAA2-SAA4A0A096LPE2 208 aa12.46□□□□□ -0.42
LINC00116-201ENST00000414416 SAA2P0DJI9 122 aaPredicted RBP12.46□□□□□ -0.42
LINC00116-201ENST00000414416 CEACAM3P40198 252 aa12.46□□□□□ -0.42
LINC00116-201ENST00000414416 LRRC37A5PQ49AS3 106 aa12.46□□□□□ -0.42
LINC00116-201ENST00000414416 IL17RELQ6ZVW7 336 aa12.46□□□□□ -0.42
LINC00116-201ENST00000414416 TCTEX1D2Q8WW35 142 aa12.46□□□□□ -0.42
LINC00116-201ENST00000414416 GSX1Q9H4S2 264 aaPredicted RBP12.46□□□□□ -0.42
LINC00116-201ENST00000414416 RAB18Q9NP72 206 aa12.46□□□□□ -0.42
LINC00116-201ENST00000414416 C3orf85A0A1B0GTC6 90 aa12.45□□□□□ -0.42
LINC00116-201ENST00000414416 PGLYRP1O75594 196 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms