RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 RBPMSQ93062 196 aaKnown RBP13.61□□□□□ -0.23
SCAMP4-204ENST00000414057 ABHD14BQ96IU4 210 aa13.61□□□□□ -0.23
SCAMP4-204ENST00000414057 TBL2Q9Y4P3 447 aaKnown RBP13.61□□□□□ -0.23
SCAMP4-204ENST00000414057 MGAM2Q2M2H8 2515 aa13.61□□□□□ -0.23
SCAMP4-204ENST00000414057 SIX6O95475 246 aa13.61□□□□□ -0.23
SCAMP4-204ENST00000414057 KRTAP10-3P60369 221 aa13.61□□□□□ -0.23
SCAMP4-204ENST00000414057 LY6EQ16553 131 aa13.61□□□□□ -0.23
SCAMP4-204ENST00000414057 FAM71F2Q6NXP2 309 aa13.61□□□□□ -0.23
SCAMP4-204ENST00000414057 OR51H1Q8NH63 302 aa13.61□□□□□ -0.23
SCAMP4-204ENST00000414057 ADTRPQ96IZ2 230 aa13.61□□□□□ -0.23
SCAMP4-204ENST00000414057 S1PR3Q99500 378 aa13.61□□□□□ -0.23
SCAMP4-204ENST00000414057 NPFFR1Q9GZQ6 430 aa13.61□□□□□ -0.23
SCAMP4-204ENST00000414057 TMEM133Q9H2Q1 129 aa13.61□□□□□ -0.23
SCAMP4-204ENST00000414057 FAM25EA8MYX2 175 aa13.6□□□□□ -0.23
SCAMP4-204ENST00000414057 ATG12O94817 140 aa13.6□□□□□ -0.23
SCAMP4-204ENST00000414057 ARG1P05089 322 aa13.6□□□□□ -0.23
SCAMP4-204ENST00000414057 KIR2DS2P43631 304 aa13.6□□□□□ -0.23
SCAMP4-204ENST00000414057 TMEM268Q5VZI3 342 aa13.6□□□□□ -0.23
SCAMP4-204ENST00000414057 OR9G1Q8NH87 305 aa13.6□□□□□ -0.23
SCAMP4-204ENST00000414057 OR2T6Q8NHC8 308 aa13.6□□□□□ -0.23
SCAMP4-204ENST00000414057 C17orf50Q8WW18 174 aa13.6□□□□□ -0.23
SCAMP4-204ENST00000414057 MALSU1Q96EH3 234 aa13.6□□□□□ -0.23
SCAMP4-204ENST00000414057 C2orf50Q96LR7 162 aa13.6□□□□□ -0.23
SCAMP4-204ENST00000414057 PRR13Q9NZ81 148 aa13.6□□□□□ -0.23
SCAMP4-204ENST00000414057 COMMD9Q9P000 198 aa13.6□□□□□ -0.23
SCAMP4-204ENST00000414057 C13orf42A0A1B0GVH6 325 aa13.59□□□□□ -0.23
SCAMP4-204ENST00000414057 CCSO14618 274 aa13.59□□□□□ -0.23
SCAMP4-204ENST00000414057 ADAP1O75689 374 aa13.59□□□□□ -0.23
SCAMP4-204ENST00000414057 HOXB5P09067 269 aa13.59□□□□□ -0.23
SCAMP4-204ENST00000414057 VDAC1P21796 283 aa13.59□□□□□ -0.23
SCAMP4-204ENST00000414057 DUTP33316 252 aaKnown RBP13.59□□□□□ -0.23
SCAMP4-204ENST00000414057 DEFA6Q01524 100 aa13.59□□□□□ -0.23
SCAMP4-204ENST00000414057 GGNBP1Q5YKI7 109 aa13.59□□□□□ -0.23
SCAMP4-204ENST00000414057 SELENOHQ8IZQ5 122 aaKnown RBP13.59□□□□□ -0.23
SCAMP4-204ENST00000414057 TCTEX1D2Q8WW35 142 aa13.59□□□□□ -0.23
SCAMP4-204ENST00000414057 C5orf30Q96GV9 206 aa13.59□□□□□ -0.23
SCAMP4-204ENST00000414057 AJUBAQ96IF1 538 aa13.59□□□□□ -0.23
SCAMP4-204ENST00000414057 SPIN2AQ99865 258 aa13.59□□□□□ -0.23
SCAMP4-204ENST00000414057 SPIN2BQ9BPZ2 258 aa13.59□□□□□ -0.23
SCAMP4-204ENST00000414057 PITPNC1Q9UKF7 332 aa13.59□□□□□ -0.23
SCAMP4-204ENST00000414057 PRELID3BQ9Y3B1 194 aa13.59□□□□□ -0.23
SCAMP4-204ENST00000414057 SAA2-SAA4A0A096LPE2 208 aa13.58□□□□□ -0.24
SCAMP4-204ENST00000414057 J3QR06 171 aa13.58□□□□□ -0.24
SCAMP4-204ENST00000414057 SLC31A2O15432 143 aa13.58□□□□□ -0.24
SCAMP4-204ENST00000414057 RBFOX2O43251 390 aaKnown RBP eCLIP13.58□□□□□ -0.245e-7■■□□□ 13.9
SCAMP4-204ENST00000414057 SAA2P0DJI9 122 aaPredicted RBP13.58□□□□□ -0.24
SCAMP4-204ENST00000414057 IL3RAP26951 378 aa13.58□□□□□ -0.24
SCAMP4-204ENST00000414057 THBS3P49746 956 aa13.58□□□□□ -0.24
SCAMP4-204ENST00000414057 GNG10P50151 68 aa13.58□□□□□ -0.24
SCAMP4-204ENST00000414057 PRRX1P54821 245 aa13.58□□□□□ -0.24
SCAMP4-204ENST00000414057 LYG1Q8N1E2 194 aa13.58□□□□□ -0.24
SCAMP4-204ENST00000414057 SLC35G3Q8N808 338 aa13.58□□□□□ -0.24
SCAMP4-204ENST00000414057 OR11H6Q8NGC7 330 aa13.58□□□□□ -0.24
SCAMP4-204ENST00000414057 LHFPL5Q8TAF8 219 aa13.58□□□□□ -0.24
SCAMP4-204ENST00000414057 LEAP2Q969E1 77 aa13.58□□□□□ -0.24
SCAMP4-204ENST00000414057 GPHA2Q96T91 129 aa13.58□□□□□ -0.24
SCAMP4-204ENST00000414057 ZFP57Q9NU63 452 aa13.58□□□□□ -0.24
SCAMP4-204ENST00000414057 M0R1X1 148 aa13.57□□□□□ -0.24
SCAMP4-204ENST00000414057 KCNAB3O43448 404 aa13.57□□□□□ -0.24
SCAMP4-204ENST00000414057 ZNF137PP52743 207 aa13.57□□□□□ -0.24
SCAMP4-204ENST00000414057 TAGLNQ01995 201 aaKnown RBP13.57□□□□□ -0.24
SCAMP4-204ENST00000414057 LYZL2Q7Z4W2 148 aa13.57□□□□□ -0.24
SCAMP4-204ENST00000414057 ODF3L1Q8IXM7 274 aa13.57□□□□□ -0.24
SCAMP4-204ENST00000414057 ABHD12Q8N2K0 398 aa13.57□□□□□ -0.24
SCAMP4-204ENST00000414057 LSM10Q969L4 123 aaKnown RBP13.57□□□□□ -0.24
SCAMP4-204ENST00000414057 CLEC7AQ9BXN2 247 aa13.57□□□□□ -0.24
SCAMP4-204ENST00000414057 ODF3BA8MYP8 253 aa13.56□□□□□ -0.24
SCAMP4-204ENST00000414057 TOR1AO14656 332 aa13.56□□□□□ -0.24
SCAMP4-204ENST00000414057 IGHV3-7P01780 117 aa13.56□□□□□ -0.24
SCAMP4-204ENST00000414057 PET100P0DJ07 73 aa13.56□□□□□ -0.24
SCAMP4-204ENST00000414057 SLC25A6P12236 298 aa13.56□□□□□ -0.24
SCAMP4-204ENST00000414057 IAH1Q2TAA2 248 aaPredicted RBP13.56□□□□□ -0.24
SCAMP4-204ENST00000414057 MINOS1Q5TGZ0 78 aa13.56□□□□□ -0.24
SCAMP4-204ENST00000414057 ZNF833PQ6ZTB9 187 aa13.56□□□□□ -0.24
SCAMP4-204ENST00000414057 LHFPL4Q7Z7J7 247 aa13.56□□□□□ -0.24
SCAMP4-204ENST00000414057 FAM219AQ8IW50 185 aa13.56□□□□□ -0.24
SCAMP4-204ENST00000414057 SPAG16Q8N0X2 631 aa13.56□□□□□ -0.24
SCAMP4-204ENST00000414057 OR10X1Q8NGY0 326 aa13.56□□□□□ -0.24
SCAMP4-204ENST00000414057 PPP1R1CQ8WVI7 109 aa13.56□□□□□ -0.24
SCAMP4-204ENST00000414057 SEC22AQ96IW7 307 aa13.56□□□□□ -0.24
SCAMP4-204ENST00000414057 OR10C1Q96KK4 312 aa13.56□□□□□ -0.24
SCAMP4-204ENST00000414057 ZNF251Q9BRH9 671 aa13.56□□□□□ -0.24
SCAMP4-204ENST00000414057 MINOS1-NBL1R4GNA1 71 aa13.56□□□□□ -0.24
SCAMP4-204ENST00000414057 IGHV2-26A0A0B4J1V2 119 aa13.55□□□□□ -0.24
SCAMP4-204ENST00000414057 A0A1W2PPE3 182 aa13.55□□□□□ -0.24
SCAMP4-204ENST00000414057 G3V3Q6 166 aa13.55□□□□□ -0.24
SCAMP4-204ENST00000414057 PROP1O75360 226 aa13.55□□□□□ -0.24
SCAMP4-204ENST00000414057 PSMB6P28072 239 aa13.55□□□□□ -0.24
SCAMP4-204ENST00000414057 RPL30P62888 115 aaKnown RBP13.55□□□□□ -0.24
SCAMP4-204ENST00000414057 SSX2Q16385 188 aa13.55□□□□□ -0.24
SCAMP4-204ENST00000414057 ZNF585BQ52M93 769 aa13.55□□□□□ -0.24
SCAMP4-204ENST00000414057 RPL39P5Q59GN2 51 aa13.55□□□□□ -0.24
SCAMP4-204ENST00000414057 UTF1Q5T230 341 aa13.55□□□□□ -0.24
SCAMP4-204ENST00000414057 TCF19Q9Y242 345 aa13.55□□□□□ -0.24
SCAMP4-204ENST00000414057 AMMECR1Q9Y4X0 333 aaPredicted RBP13.55□□□□□ -0.24
SCAMP4-204ENST00000414057 LINC00473A8K010 186 aa13.55□□□□□ -0.24
SCAMP4-204ENST00000414057 HMSDA8MTL9 139 aa13.55□□□□□ -0.24
SCAMP4-204ENST00000414057 SMLR1H3BR10 107 aa13.55□□□□□ -0.24
SCAMP4-204ENST00000414057 LPAR6P43657 344 aa13.55□□□□□ -0.24
SCAMP4-204ENST00000414057 DYNLT3P51808 116 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms