RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 SLC25A46Q96AG3 418 aa20.31■□□□□ 0.84
VEGFA-207ENST00000413642 SLA2Q9H6Q3 261 aa20.31■□□□□ 0.84
VEGFA-207ENST00000413642 PRELID3BQ9Y3B1 194 aa20.31■□□□□ 0.84
VEGFA-207ENST00000413642 TNFSF12O43508 249 aa20.3■□□□□ 0.84
VEGFA-207ENST00000413642 ECI1P42126 302 aa20.3■□□□□ 0.84
VEGFA-207ENST00000413642 ACOT12Q8WYK0 555 aa20.3■□□□□ 0.84
VEGFA-207ENST00000413642 PRR25Q96S07 402 aa20.3■□□□□ 0.84
VEGFA-207ENST00000413642 NAA50Q9GZZ1 169 aaKnown RBP20.3■□□□□ 0.84
VEGFA-207ENST00000413642 ZNF430Q9H8G1 570 aaPredicted RBP20.3■□□□□ 0.84
VEGFA-207ENST00000413642 OVOL1O14753 267 aa20.29■□□□□ 0.84
VEGFA-207ENST00000413642 PPYP01298 95 aa20.29■□□□□ 0.84
VEGFA-207ENST00000413642 EIF4EP06730 217 aaKnown RBP20.29■□□□□ 0.84
VEGFA-207ENST00000413642 TMEM69Q5SWH9 247 aa20.29■□□□□ 0.84
VEGFA-207ENST00000413642 C10orf55Q5SWW7 151 aa20.29■□□□□ 0.84
VEGFA-207ENST00000413642 PHB2Q99623 299 aa20.29■□□□□ 0.84
VEGFA-207ENST00000413642 HSD17B10Q99714 261 aaKnown RBP20.29■□□□□ 0.84
VEGFA-207ENST00000413642 COMMD3Q9UBI1 195 aa20.29■□□□□ 0.84
VEGFA-207ENST00000413642 CBX5P45973 191 aa20.28■□□□□ 0.84
VEGFA-207ENST00000413642 FXYD4P59646 89 aa20.28■□□□□ 0.84
VEGFA-207ENST00000413642 CDK10Q15131 360 aa20.28■□□□□ 0.84
VEGFA-207ENST00000413642 OR5AP2Q8NGF4 316 aa20.28■□□□□ 0.84
VEGFA-207ENST00000413642 SRSF12Q8WXF0 261 aaKnown RBP20.28■□□□□ 0.84
VEGFA-207ENST00000413642 SLC5A7Q9GZV3 580 aa20.28■□□□□ 0.84
VEGFA-207ENST00000413642 MRPS7Q9Y2R9 242 aaKnown RBP20.28■□□□□ 0.84
VEGFA-207ENST00000413642 RBMXL2O75526 392 aaKnown RBP20.27■□□□□ 0.84
VEGFA-207ENST00000413642 HSPB1P04792 205 aaKnown RBP20.27■□□□□ 0.84
VEGFA-207ENST00000413642 IFT46Q9NQC8 304 aa20.27■□□□□ 0.84
VEGFA-207ENST00000413642 COA4Q9NYJ1 87 aa20.27■□□□□ 0.84
VEGFA-207ENST00000413642 H3BUA1 57 aa20.26■□□□□ 0.83
VEGFA-207ENST00000413642 RAMP3O60896 148 aa20.26■□□□□ 0.83
VEGFA-207ENST00000413642 ZNF66Q6ZN08 573 aa20.26■□□□□ 0.83
VEGFA-207ENST00000413642 OR4S2Q8NH73 311 aa20.26■□□□□ 0.83
VEGFA-207ENST00000413642 TMEM68Q96MH6 324 aa20.26■□□□□ 0.83
VEGFA-207ENST00000413642 C13orf42A0A1B0GVH6 325 aa20.25■□□□□ 0.83
VEGFA-207ENST00000413642 ANKRD34BA5PLL1 514 aa20.25■□□□□ 0.83
VEGFA-207ENST00000413642 RFX2P48378 723 aa20.25■□□□□ 0.83
VEGFA-207ENST00000413642 ADAD2Q8NCV1 583 aaKnown RBP20.25■□□□□ 0.83
VEGFA-207ENST00000413642 GIMAP1Q8WWP7 306 aa20.25■□□□□ 0.83
VEGFA-207ENST00000413642 KCTD12Q96CX2 325 aaKnown RBP20.25■□□□□ 0.83
VEGFA-207ENST00000413642 TINAGL1Q9GZM7 467 aaPredicted RBP20.25■□□□□ 0.83
VEGFA-207ENST00000413642 EHFQ9NZC4 300 aa20.25■□□□□ 0.83
VEGFA-207ENST00000413642 ZMAT5Q9UDW3 170 aaKnown RBP20.25■□□□□ 0.83
VEGFA-207ENST00000413642 ANAPC10Q9UM13 185 aa20.25■□□□□ 0.83
VEGFA-207ENST00000413642 PMP2P02689 132 aa20.24■□□□□ 0.83
VEGFA-207ENST00000413642 PRH1P02810 166 aa20.24■□□□□ 0.83
VEGFA-207ENST00000413642 TMEM17Q86X19 198 aa20.24■□□□□ 0.83
VEGFA-207ENST00000413642 MMD2Q8IY49 270 aa20.24■□□□□ 0.83
VEGFA-207ENST00000413642 SULT1C2O00338 296 aa20.23■□□□□ 0.83
VEGFA-207ENST00000413642 MPPED1O15442 326 aa20.23■□□□□ 0.83
VEGFA-207ENST00000413642 SAP30O75446 220 aa20.23■□□□□ 0.83
VEGFA-207ENST00000413642 OR9G9P0C7N8 305 aa20.23■□□□□ 0.83
VEGFA-207ENST00000413642 DYRK1AQ13627 763 aa20.23■□□□□ 0.83
VEGFA-207ENST00000413642 ZNF818PQ6ZRF7 136 aa20.23■□□□□ 0.83
VEGFA-207ENST00000413642 SSX9Q7RTT3 188 aa20.23■□□□□ 0.83
VEGFA-207ENST00000413642 PUSL1Q8N0Z8 303 aaKnown RBP20.23■□□□□ 0.83
VEGFA-207ENST00000413642 HMX3A6NHT5 357 aa20.22■□□□□ 0.83
VEGFA-207ENST00000413642 OR2A4O95047 310 aa20.22■□□□□ 0.83
VEGFA-207ENST00000413642 PRSS3P35030 304 aa20.22■□□□□ 0.83
VEGFA-207ENST00000413642 MSMO1Q15800 293 aa20.22■□□□□ 0.83
VEGFA-207ENST00000413642 CTF1Q16619 201 aa20.22■□□□□ 0.83
VEGFA-207ENST00000413642 SPAG16Q8N0X2 631 aa20.22■□□□□ 0.83
VEGFA-207ENST00000413642 OR2A7Q96R45 310 aa20.22■□□□□ 0.83
VEGFA-207ENST00000413642 A0A0G2JLM5 398 aa20.21■□□□□ 0.83
VEGFA-207ENST00000413642 E7EUB6 86 aa20.21■□□□□ 0.83
VEGFA-207ENST00000413642 HPGDSO60760 199 aa20.21■□□□□ 0.83
VEGFA-207ENST00000413642 ACTL6BO94805 426 aa20.21■□□□□ 0.83
VEGFA-207ENST00000413642 KBTBD11O94819 623 aa20.21■□□□□ 0.83
VEGFA-207ENST00000413642 BRI3O95415 125 aa20.21■□□□□ 0.83
VEGFA-207ENST00000413642 TRBV12-3P01733 135 aa20.21■□□□□ 0.83
VEGFA-207ENST00000413642 MYOD1P15172 320 aa20.21■□□□□ 0.83
VEGFA-207ENST00000413642 NAT1P18440 290 aa20.21■□□□□ 0.83
VEGFA-207ENST00000413642 ELK1P19419 428 aa20.21■□□□□ 0.83
VEGFA-207ENST00000413642 ZNF45Q02386 682 aa20.21■□□□□ 0.83
VEGFA-207ENST00000413642 GPR107Q5VW38 600 aa20.21■□□□□ 0.83
VEGFA-207ENST00000413642 C19orf35Q6ZS72 473 aa20.21■□□□□ 0.83
VEGFA-207ENST00000413642 ANKRD13BQ86YJ7 626 aa20.21■□□□□ 0.83
VEGFA-207ENST00000413642 LYSMD2Q8IV50 215 aa20.21■□□□□ 0.83
VEGFA-207ENST00000413642 ZBTB34Q8NCN2 500 aa20.21■□□□□ 0.83
VEGFA-207ENST00000413642 TMEM167AQ8TBQ9 72 aa20.21■□□□□ 0.83
VEGFA-207ENST00000413642 ZNF256Q9Y2P7 627 aaPredicted RBP20.21■□□□□ 0.83
VEGFA-207ENST00000413642 LSM4Q9Y4Z0 139 aaKnown RBP20.21■□□□□ 0.83
VEGFA-207ENST00000413642 A0A1B0GW64 132 aa20.2■□□□□ 0.82
VEGFA-207ENST00000413642 GABARAPO95166 117 aa20.2■□□□□ 0.82
VEGFA-207ENST00000413642 APOA1P02647 267 aa20.2■□□□□ 0.82
VEGFA-207ENST00000413642 INSL3P51460 131 aa20.2■□□□□ 0.82
VEGFA-207ENST00000413642 C11orf87Q6NUJ2 197 aa20.2■□□□□ 0.82
VEGFA-207ENST00000413642 ACSM6Q6P461 480 aa20.2■□□□□ 0.82
VEGFA-207ENST00000413642 DHRS11Q6UWP2 260 aa20.2■□□□□ 0.82
VEGFA-207ENST00000413642 ZNF429Q86V71 674 aa20.2■□□□□ 0.82
VEGFA-207ENST00000413642 SNX29P2Q8IUI4 249 aa20.2■□□□□ 0.82
VEGFA-207ENST00000413642 ZNF2Q9BSG1 426 aaPredicted RBP20.2■□□□□ 0.82
VEGFA-207ENST00000413642 RANGRFQ9HD47 186 aaPredicted RBP20.2■□□□□ 0.82
VEGFA-207ENST00000413642 TEX22C9J3V5 150 aa20.19■□□□□ 0.82
VEGFA-207ENST00000413642 CREBL2O60519 120 aaPredicted RBP20.19■□□□□ 0.82
VEGFA-207ENST00000413642 LY86O95711 162 aa20.19■□□□□ 0.82
VEGFA-207ENST00000413642 IL6RP08887 468 aaPredicted RBP20.19■□□□□ 0.82
VEGFA-207ENST00000413642 HLA-DMAP28067 261 aa20.19■□□□□ 0.82
VEGFA-207ENST00000413642 GNRHRP30968 328 aa20.19■□□□□ 0.82
VEGFA-207ENST00000413642 KIR2DS2P43631 304 aa20.19■□□□□ 0.82
VEGFA-207ENST00000413642 RORCP51449 518 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms